| GenBank top hits | e value | %identity | Alignment |
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| KAA0036644.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-84 | 86.96 | Show/hide |
Query: MKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNP
MKDLGEADVILGVK RKNK +LSLCQSHYVEKILKKFDSFDVSP+RTPFDASKHLKKNKGDSVSQPEYAKIIGS+MYL+NYTRPDIAYAVSRLSRYTHNP
Subjt: MKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNP
Query: DRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
+RYHWDALRHLLRYLK I+YCL+FKK +LEGYCDAN V DNDEV STSGYVFLL G AISWKS KQT IARST+E EFIAL
Subjt: DRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
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| KAA0039122.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.9e-84 | 86.41 | Show/hide |
Query: MKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNP
MKDLGEADVILGVK RKNK +LSLCQSHYVEKIL KFDSFDVSP+RTPFDASKHLKKNKGDSVSQPEYAKIIGS+MYL+NYTRPDIAYAVS LSRYTHNP
Subjt: MKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNP
Query: DRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
+RYHWDALRHLLRYLK I+YCL+F K + LEGYCDAN V DNDEV STSGYVFLLRGGAISWKS KQT IARST+E EFIAL
Subjt: DRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
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| KAA0049695.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.0e-92 | 86.5 | Show/hide |
Query: MELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRP
MEL+TDTK FLSSHFEMKDLGEADVILGVK RKNK +LSLCQSHYVEKILKKFD FDVSP+RTPFDASKHL KNKGDSVSQPEYAKIIGS+MYL+NYTRP
Subjt: MELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRP
Query: DIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
DIAYAVSRLSRYTHNPDRYHWD LRHLLRYLK I+YCLYF K +LEGYCDAN V DNDEV STSGYVFLL GGAISWKS KQT IARST+E EFIAL
Subjt: DIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
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| TYK04394.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.1e-83 | 87.29 | Show/hide |
Query: LGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNPDRY
LGEADVILGVK RKNK +LSLCQSHYVEKILKKFDSFDVSP+RTPFDASKHLKKNKGDSVSQPEYAKIIGS+MYL+NYTRPDIAYAVSRLSRYTHNP+RY
Subjt: LGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNPDRY
Query: HWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
HWDALRHLLRYLK I+YCL+FKK +LEGYCDAN V DNDEV STSGYVFLL GGAISWKS KQT IARST+E EFIAL
Subjt: HWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
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| TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.8e-97 | 87.92 | Show/hide |
Query: MLIFGINMELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMY
MLIFG NMELITDTK FLSSHFEMKDLGEADVILGVK RKNK +LSLCQSHYVEKILKKFDSFDVSP+RTPFDASKHLKKNKGDSVSQPEYAKIIGS+MY
Subjt: MLIFGINMELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMY
Query: LINYTRPDIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTL
L+NYTRPDIAYAVSRLSRYTHNP+RYHWDALRHLLRYLK I+YCL+FKK +LEGYCDAN V DNDEV STSGYVFLL GGAISWKS KQT IARST+
Subjt: LINYTRPDIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTL
Query: EFEFIAL
E EFIAL
Subjt: EFEFIAL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SZD1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.3e-85 | 86.96 | Show/hide |
Query: MKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNP
MKDLGEADVILGVK RKNK +LSLCQSHYVEKILKKFDSFDVSP+RTPFDASKHLKKNKGDSVSQPEYAKIIGS+MYL+NYTRPDIAYAVSRLSRYTHNP
Subjt: MKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNP
Query: DRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
+RYHWDALRHLLRYLK I+YCL+FKK +LEGYCDAN V DNDEV STSGYVFLL G AISWKS KQT IARST+E EFIAL
Subjt: DRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
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| A0A5A7U7W6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.8e-93 | 86.5 | Show/hide |
Query: MELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRP
MEL+TDTK FLSSHFEMKDLGEADVILGVK RKNK +LSLCQSHYVEKILKKFD FDVSP+RTPFDASKHL KNKGDSVSQPEYAKIIGS+MYL+NYTRP
Subjt: MELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRP
Query: DIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
DIAYAVSRLSRYTHNPDRYHWD LRHLLRYLK I+YCLYF K +LEGYCDAN V DNDEV STSGYVFLL GGAISWKS KQT IARST+E EFIAL
Subjt: DIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
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| A0A5D3C5T2 Ty1-copia retrotransposon protein | 8.5e-98 | 87.92 | Show/hide |
Query: MLIFGINMELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMY
MLIFG NMELITDTK FLSSHFEMKDLGEADVILGVK RKNK +LSLCQSHYVEKILKKFDSFDVSP+RTPFDASKHLKKNKGDSVSQPEYAKIIGS+MY
Subjt: MLIFGINMELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMY
Query: LINYTRPDIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTL
L+NYTRPDIAYAVSRLSRYTHNP+RYHWDALRHLLRYLK I+YCL+FKK +LEGYCDAN V DNDEV STSGYVFLL GGAISWKS KQT IARST+
Subjt: LINYTRPDIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTL
Query: EFEFIAL
E EFIAL
Subjt: EFEFIAL
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| A0A5D3DSQ3 Ty1-copia retrotransposon protein | 5.4e-84 | 87.29 | Show/hide |
Query: LGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNPDRY
LGEADVILGVK RKNK +LSLCQSHYVEKILKKFDSFDVSP+RTPFDASKHLKKNKGDSVSQPEYAKIIGS+MYL+NYTRPDIAYAVSRLSRYTHNP+RY
Subjt: LGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNPDRY
Query: HWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
HWDALRHLLRYLK I+YCL+FKK +LEGYCDAN V DNDEV STSGYVFLL GGAISWKS KQT IARST+E EFIAL
Subjt: HWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
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| A0A5D3DTE2 Ty1-copia retrotransposon protein | 1.4e-84 | 86.41 | Show/hide |
Query: MKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNP
MKDLGEADVILGVK RKNK +LSLCQSHYVEKIL KFDSFDVSP+RTPFDASKHLKKNKGDSVSQPEYAKIIGS+MYL+NYTRPDIAYAVS LSRYTHNP
Subjt: MKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNP
Query: DRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
+RYHWDALRHLLRYLK I+YCL+F K + LEGYCDAN V DNDEV STSGYVFLLRGGAISWKS KQT IARST+E EFIAL
Subjt: DRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARSTLEFEFIAL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 7.3e-22 | 33.01 | Show/hide |
Query: NMELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTR
+M + + K +L F M DL E +G++ + + L QS YV+KIL KF+ + + + TP + + + D +IG LMY++ TR
Subjt: NMELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMYLINYTR
Query: PDIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKISIILE----GYCDANRVRDNDEVKSTSGYVF-LLRGGAISWKSAKQTYIARSTLE
PD+ AV+ LSRY+ + W L+ +LRYLK I+ L FKK ++ E GY D++ + KST+GY+F + I W + +Q +A S+ E
Subjt: PDIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKISIILE----GYCDANRVRDNDEVKSTSGYVF-LLRGGAISWKSAKQTYIARSTLE
Query: FEFIAL
E++AL
Subjt: FEFIAL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.9e-36 | 42.13 | Show/hide |
Query: MLIFGINMELITDTKLFLSSHFEMKDLGEADVILGVK--NRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKK--------NKGDSVSQPE
MLI G + LI K LS F+MKDLG A ILG+K + L L Q Y+E++L++F+ + P+ TP L K KG+ P
Subjt: MLIFGINMELITDTKLFLSSHFEMKDLGEADVILGVK--NRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKK--------NKGDSVSQPE
Query: YAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSA
Y+ +GSLMY + TRPDIA+AV +SR+ NP + HW+A++ +LRYL+ CL F IL+GY DA+ D D KS++GY+F GGAISW+S
Subjt: YAKIIGSLMYLINYTRPDIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSA
Query: KQTYIARSTLEFEFIA
Q +A ST E E+IA
Subjt: KQTYIARSTLEFEFIA
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 7.3e-22 | 32.21 | Show/hide |
Query: MLIFGINMELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMY
+L+ G + L+ LSS F MKDLG LG++ + + L L Q+ Y E+IL D P+ TP + + ++ I+G+L Y
Subjt: MLIFGINMELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQPEYAKIIGSLMY
Query: LINYTRPDIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKIS-IILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARST
L TRPDI+YAV+ + + H P +D L+ +LRY+K I + LY K S + ++ +CD++ +ST+G+ L ISW + +Q ++RS+
Subjt: LINYTRPDIAYAVSRLSRYTHNPDRYHWDALRHLLRYLK--INYCLYFKKIS-IILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARST
Query: LEFEFIAL
E E+ AL
Subjt: LEFEFIAL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-27 | 37.38 | Show/hide |
Query: MLIFGINMELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQP-EYAKIIGSLM
+LI G + L+ +T LS F +KD E LG++ ++ L L Q Y+ +L + + P+ TP S L G ++ P EY I+GSL
Subjt: MLIFGINMELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQP-EYAKIIGSLM
Query: YLINYTRPDIAYAVSRLSRYTHNPDRYHWDALRHLLRYL--KINYCLYFKK-ISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARS
YL +TRPDI+YAV+RLS++ H P H AL+ +LRYL N+ ++ KK ++ L Y DA+ D D+ ST+GY+ L ISW S KQ + RS
Subjt: YLINYTRPDIAYAVSRLSRYTHNPDRYHWDALRHLLRYL--KINYCLYFKK-ISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARS
Query: TLEFEF
+ E E+
Subjt: TLEFEF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.4e-27 | 36.41 | Show/hide |
Query: MLIFGINMELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQP-EYAKIIGSLM
+LI G + L+ T LS F +K+ + LG++ ++ L L Q Y +L + + P+ TP S L + G + P EY I+GSL
Subjt: MLIFGINMELITDTKLFLSSHFEMKDLGEADVILGVKNRKNKINLSLCQSHYVEKILKKFDSFDVSPIRTPFDASKHLKKNKGDSVSQP-EYAKIIGSLM
Query: YLINYTRPDIAYAVSRLSRYTHNPDRYHWDALRHLLRYL--KINYCLYFKK-ISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARS
YL +TRPD++YAV+RLS+Y H P HW+AL+ +LRYL ++ ++ KK ++ L Y DA+ D D+ ST+GY+ L ISW S KQ + RS
Subjt: YLINYTRPDIAYAVSRLSRYTHNPDRYHWDALRHLLRYL--KINYCLYFKK-ISIILEGYCDANRVRDNDEVKSTSGYVFLLRGGAISWKSAKQTYIARS
Query: TLEFEF
+ E E+
Subjt: TLEFEF
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