CuGenDBv2

Gene ID	Cmc05g0134341
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pol protein
Genome location	CMiso1.1chr05:15849778..15850807
RNA-Seq Expression	Cmc05g0134341
Synteny	Cmc05g0134341
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043227 - membrane-bounded organelle (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041588 - Integrase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035938.1 pol protein [Cucumis melo var. makuwa]

6.9e-178

95.87

Show/hide

Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        MHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM+FITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TASKWA LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL+FPGSWD+HLHLMEFAYNNSYQA
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR
        TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGP+L+QSTNEAIQKIRSRM TAQSRQKSYADVR KDLEF++GDKVFLKVAPMKGVLRFERRGKLSPRFV 
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR

Query:  PFEILEQIGPVAYRL
        PFEILE+IGPVAYRL
Subjt:  PFEILEQIGPVAYRL

KAA0051310.1 pol protein [Cucumis melo var. makuwa]

2.5e-183

99.37

Show/hide

Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR
        TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVR KDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR

Query:  PFEILEQIGPVAYRLV
        PFEILE+IGPVAYRLV
Subjt:  PFEILEQIGPVAYRLV

KAA0051368.1 pol protein [Cucumis melo var. makuwa]

6.9e-178

95.87

Show/hide

Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        MHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM+FITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TASKWA LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL+FPGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR
        TIGMAPFEALYG+CCRSPVCWGEVGEQRLMGP+L+QSTNEAIQKIRSRM TAQSRQKSYADVR KDLEF++GDKVFLKVAPMKGVLRFERRGKLSPRFV 
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR

Query:  PFEILEQIGPVAYRL
        PFEILE+IGPVAYRL
Subjt:  PFEILEQIGPVAYRL

KAA0064005.1 pol protein [Cucumis melo var. makuwa]

2.0e-177

95.56

Show/hide

Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        MHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM+FITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TASKWA LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL+FPGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR
        TIGM PFEALYG+CCRSPVCWGEVGEQRLMGP+L+QSTNEAIQKIRSRM TAQSRQKSYADVR KDLEF++GDKVFLKVAPMKGVLRFERRGKLSPRFV 
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR

Query:  PFEILEQIGPVAYRL
        PFEILE+IGPVAYRL
Subjt:  PFEILEQIGPVAYRL

KAA0066456.1 pol protein [Cucumis melo var. makuwa]

7.7e-177

95.24

Show/hide

Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        MHPGSTK+YQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM+FITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TASKWA LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL+FPGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR
        TIGMAPFEALYG+CCRSPVCWGEVGEQRLMGP+L+QSTNEAIQKIRSRM TAQSRQKSYADVR KDLEF+VGDKVFLKVAPM+GV+RFERRGKLSPRFV 
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR

Query:  PFEILEQIGPVAYRL
        PFEILE+IGPVAYRL
Subjt:  PFEILEQIGPVAYRL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SZD6 Pol protein

3.4e-178

95.87

Show/hide

Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        MHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM+FITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TASKWA LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL+FPGSWD+HLHLMEFAYNNSYQA
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR
        TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGP+L+QSTNEAIQKIRSRM TAQSRQKSYADVR KDLEF++GDKVFLKVAPMKGVLRFERRGKLSPRFV 
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR

Query:  PFEILEQIGPVAYRL
        PFEILE+IGPVAYRL
Subjt:  PFEILEQIGPVAYRL

A0A5A7U7V9 Reverse transcriptase

3.4e-178

95.87

Show/hide

Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        MHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM+FITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TASKWA LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL+FPGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR
        TIGMAPFEALYG+CCRSPVCWGEVGEQRLMGP+L+QSTNEAIQKIRSRM TAQSRQKSYADVR KDLEF++GDKVFLKVAPMKGVLRFERRGKLSPRFV 
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR

Query:  PFEILEQIGPVAYRL
        PFEILE+IGPVAYRL
Subjt:  PFEILEQIGPVAYRL

A0A5A7U810 Pol protein

1.2e-183

99.37

Show/hide

Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR
        TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVR KDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR

Query:  PFEILEQIGPVAYRLV
        PFEILE+IGPVAYRLV
Subjt:  PFEILEQIGPVAYRLV

A0A5A7VDP3 Pol protein

9.8e-178

95.56

Show/hide

Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        MHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM+FITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TASKWA LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL+FPGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR
        TIGM PFEALYG+CCRSPVCWGEVGEQRLMGP+L+QSTNEAIQKIRSRM TAQSRQKSYADVR KDLEF++GDKVFLKVAPMKGVLRFERRGKLSPRFV 
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR

Query:  PFEILEQIGPVAYRL
        PFEILE+IGPVAYRL
Subjt:  PFEILEQIGPVAYRL

A0A5A7VJE2 Reverse transcriptase

3.7e-177

95.24

Show/hide

Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        MHPGSTK+YQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSM+FITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TASKWA LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL+FPGSWDSHLHLMEFAYNNSYQA
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR
        TIGMAPFEALYG+CCRSPVCWGEVGEQRLMGP+L+QSTNEAIQKIRSRM TAQSRQKSYADVR KDLEF+VGDKVFLKVAPM+GV+RFERRGKLSPRFV 
Subjt:  TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVR

Query:  PFEILEQIGPVAYRL
        PFEILE+IGPVAYRL
Subjt:  PFEILEQIGPVAYRL

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

5.9e-47

33.44

Show/hide

Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SM+FIT LP +  G+  ++VVVDR +K A  VP   + 
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TA + A ++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRF
           M PFE ++      SP+   E+        +  Q T +  Q ++  + T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F
Subjt:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRF

Query:  VRPFEILEQIGPVAYRL
          PF +L++ GP  Y L
Subjt:  VRPFEILEQIGPVAYRL

P0CT35 Transposon Tf2-2 polyprotein

5.9e-47

33.44

Show/hide

Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SM+FIT LP +  G+  ++VVVDR +K A  VP   + 
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TA + A ++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRF
           M PFE ++      SP+   E+        +  Q T +  Q ++  + T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F
Subjt:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRF

Query:  VRPFEILEQIGPVAYRL
          PF +L++ GP  Y L
Subjt:  VRPFEILEQIGPVAYRL

P0CT36 Transposon Tf2-3 polyprotein

5.9e-47

33.44

Show/hide

Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SM+FIT LP +  G+  ++VVVDR +K A  VP   + 
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TA + A ++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRF
           M PFE ++      SP+   E+        +  Q T +  Q ++  + T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F
Subjt:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRF

Query:  VRPFEILEQIGPVAYRL
          PF +L++ GP  Y L
Subjt:  VRPFEILEQIGPVAYRL

P0CT41 Transposon Tf2-12 polyprotein

5.9e-47

33.44

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Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SM+FIT LP +  G+  ++VVVDR +K A  VP   + 
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TA + A ++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRF
           M PFE ++      SP+   E+        +  Q T +  Q ++  + T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F
Subjt:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRF

Query:  VRPFEILEQIGPVAYRL
          PF +L++ GP  Y L
Subjt:  VRPFEILEQIGPVAYRL

Q9UR07 Transposon Tf2-11 polyprotein

5.9e-47

33.44

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Query:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
        +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SM+FIT LP +  G+  ++VVVDR +K A  VP   + 
Subjt:  MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY

Query:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA
        TA + A ++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +
Subjt:  TASKWAHLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQA

Query:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRF
           M PFE ++      SP+   E+        +  Q T +  Q ++  + T   + K Y D++ +++ EF  GD V +K     G L   +  KL+P F
Subjt:  TIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDL-EFDVGDKVFLKVAPMKGVLRFERRGKLSPRF

Query:  VRPFEILEQIGPVAYRL
          PF +L++ GP  Y L
Subjt:  VRPFEILEQIGPVAYRL

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGATTTATTGGTGGCGTAACATGAAGAGAGAGGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCA
GGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGAATTTCATTACAGGACTGCCGAGAACTC
TGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACATCTGTACATG
TCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTT
AGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGAAATTTCCAGGTAGCTGGG
ACTCCCACTTGCATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTCGAGGCCTTGTACGGAAAGTGTTGTAGATCCCCTGTTTGC
TGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTAAGTTAATTCAGTCTACTAACGAAGCGATCCAGAAAATTAGATCACGTATGCAGACCGCACAGAGTAGGCAGAA
GAGTTATGCTGATGTTAGATGGAAGGATCTTGAGTTTGATGTGGGGGACAAGGTGTTCTTGAAGGTAGCACCTATGAAAGGTGTCTTACGATTTGAAAGGAGAGGAAAGC
TGAGTCCCCGTTTTGTTAGGCCATTTGAGATTCTGGAGCAGATTGGCCCTGTAGCTTATCGCTTGGTTACGTACCAGATCCATCCCATGTAG

mRNA sequence

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Protein sequence

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MHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMNFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAHLYM
SEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC
WGEVGEQRLMGPKLIQSTNEAIQKIRSRMQTAQSRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVRPFEILEQIGPVAYRLVTYQIHPM

Cmc05g0134341 (gene) of Melon (Charmono) v1.1 genome