; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc05g0134741 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0134741
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr05:16434712..16435836
RNA-Seq ExpressionCmc05g0134741
SyntenyCmc05g0134741
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]9.4e-20397.25Show/hide
Query:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA
        MPLAKCLVITGPTPSVVQTDLRQPDGLKMI AMQLKKGLSRDEPTFMAIPL SSENSGETV +EI+RVL+KYRDVMPDSLPKSLPPRRMIDHEIELVPGA
Subjt:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA

Query:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
        KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
Subjt:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV

Query:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
        RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTL+NQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
Subjt:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF

Query:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV
        LGHVIECGRIGMEEG+IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTEL KKDV
Subjt:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]9.4e-20397.25Show/hide
Query:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA
        MPLAKCLVITGPTPSVVQTDLRQPDGLKMI AMQLKKGLSRDEPTFMAIPL SSENSGETV +EI+RVL+KYRDVMPDSLPKSLPPRRMIDHEIELVPGA
Subjt:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA

Query:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
        KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
Subjt:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV

Query:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
        RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTL+NQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
Subjt:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF

Query:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV
        LGHVIECGRIGMEEG+IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTEL KKDV
Subjt:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]9.4e-20397.25Show/hide
Query:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA
        MPLAKCLVITGPTPSVVQTDLRQPDGLKMI AMQLKKGLSRDEPTFMAIPL SSENSGETV +EI+RVL+KYRDVMPDSLPKSLPPRRMIDHEIELVPGA
Subjt:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA

Query:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
        KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
Subjt:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV

Query:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
        RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTL+NQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
Subjt:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF

Query:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV
        LGHVIECGRIGMEEG+IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTEL KKDV
Subjt:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]9.4e-20397.25Show/hide
Query:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA
        MPLAKCLVITGPTPSVVQTDLRQPDGLKMI AMQLKKGLSRDEPTFMAIPL SSENSGETV +EI+RVL+KYRDVMPDSLPKSLPPRRMIDHEIELVPGA
Subjt:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA

Query:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
        KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
Subjt:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV

Query:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
        RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTL+NQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
Subjt:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF

Query:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV
        LGHVIECGRIGMEEG+IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTEL KKDV
Subjt:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]3.8e-20498.08Show/hide
Query:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA
        MPLAKCLVITGPTPSVVQTDLRQPDGLKMI AMQLKKGLSRDEPTFMAIPLNSSENSGETV +EIVRVL+KYRDVMPDSLPKSLPPRRMIDHEIELVPGA
Subjt:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA

Query:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
        KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
Subjt:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV

Query:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
        RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTL+NQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
Subjt:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF

Query:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV
        LGHVIECGRIGMEEG+IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTEL KKDV
Subjt:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV

TrEMBL top hitse value%identityAlignment
A0A5A7T0E2 Reverse transcriptase4.6e-20397.25Show/hide
Query:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA
        MPLAKCLVITGPTPSVVQTDLRQPDGLKMI AMQLKKGLSRDEPTFMAIPL SSENSGETV +EI+RVL+KYRDVMPDSLPKSLPPRRMIDHEIELVPGA
Subjt:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA

Query:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
        KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
Subjt:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV

Query:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
        RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTL+NQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
Subjt:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF

Query:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV
        LGHVIECGRIGMEEG+IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTEL KKDV
Subjt:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV

A0A5A7UXR6 Reverse transcriptase4.6e-20397.25Show/hide
Query:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA
        MPLAKCLVITGPTPSVVQTDLRQPDGLKMI AMQLKKGLSRDEPTFMAIPL SSENSGETV +EI+RVL+KYRDVMPDSLPKSLPPRRMIDHEIELVPGA
Subjt:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA

Query:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
        KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
Subjt:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV

Query:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
        RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTL+NQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
Subjt:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF

Query:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV
        LGHVIECGRIGMEEG+IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTEL KKDV
Subjt:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV

A0A5D3BRZ6 Reverse transcriptase4.6e-20397.25Show/hide
Query:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA
        MPLAKCLVITGPTPSVVQTDLRQPDGLKMI AMQLKKGLSRDEPTFMAIPL SSENSGETV +EI+RVL+KYRDVMPDSLPKSLPPRRMIDHEIELVPGA
Subjt:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA

Query:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
        KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
Subjt:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV

Query:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
        RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTL+NQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
Subjt:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF

Query:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV
        LGHVIECGRIGMEEG+IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTEL KKDV
Subjt:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV

A0A5D3C4R1 Reverse transcriptase4.6e-20397.25Show/hide
Query:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA
        MPLAKCLVITGPTPSVVQTDLRQPDGLKMI AMQLKKGLSRDEPTFMAIPL SSENSGETV +EI+RVL+KYRDVMPDSLPKSLPPRRMIDHEIELVPGA
Subjt:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA

Query:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
        KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
Subjt:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV

Query:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
        RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTL+NQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
Subjt:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF

Query:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV
        LGHVIECGRIGMEEG+IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTEL KKDV
Subjt:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV

A0A5D3C9P8 Reverse transcriptase1.8e-20498.08Show/hide
Query:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA
        MPLAKCLVITGPTPSVVQTDLRQPDGLKMI AMQLKKGLSRDEPTFMAIPLNSSENSGETV +EIVRVL+KYRDVMPDSLPKSLPPRRMIDHEIELVPGA
Subjt:  MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGA

Query:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
        KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV
Subjt:  KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQV

Query:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
        RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTL+NQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF
Subjt:  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINF

Query:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV
        LGHVIECGRIGMEEG+IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTEL KKDV
Subjt:  LGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDV

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein6.2e-5637.83Show/hide
Query:  EIVRVLKKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRAL
        E+  + K+++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ L +G IR +KA    PV+F  KK+G+LR+ +DY+ L
Subjt:  EIVRVLKKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRAL

Query:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  F+KLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   IN +  E  +  VV Y+DDI+++
Subjt:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVY

Query:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELP
        S +  EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  W  PK+  ELR FLG  NY R+F+   S+   PL  L 
Subjt:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELP

Query:  KKDV
        KKDV
Subjt:  KKDV

P0CT35 Transposon Tf2-2 polyprotein6.2e-5637.83Show/hide
Query:  EIVRVLKKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRAL
        E+  + K+++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ L +G IR +KA    PV+F  KK+G+LR+ +DY+ L
Subjt:  EIVRVLKKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRAL

Query:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  F+KLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   IN +  E  +  VV Y+DDI+++
Subjt:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVY

Query:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELP
        S +  EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  W  PK+  ELR FLG  NY R+F+   S+   PL  L 
Subjt:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELP

Query:  KKDV
        KKDV
Subjt:  KKDV

P0CT41 Transposon Tf2-12 polyprotein6.2e-5637.83Show/hide
Query:  EIVRVLKKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRAL
        E+  + K+++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ L +G IR +KA    PV+F  KK+G+LR+ +DY+ L
Subjt:  EIVRVLKKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRAL

Query:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  F+KLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   IN +  E  +  VV Y+DDI+++
Subjt:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVY

Query:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELP
        S +  EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  W  PK+  ELR FLG  NY R+F+   S+   PL  L 
Subjt:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELP

Query:  KKDV
        KKDV
Subjt:  KKDV

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.4e-6340.44Show/hide
Query:  TFMAIPLNSSENSG-ETVSEEIVRVLKKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAP
        T  ++  N++++S  +T     V + +KYR+++ + LP       ++P    + H+IE+ PGA+ P    Y +      E+ K + +LL+  FI P+K+P
Subjt:  TFMAIPLNSSENSG-ETVSEEIVRVLKKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAP

Query:  YGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCT
          +PV+   KKDG+ RLC+DYR LNK T+ + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  KT  VT  G +E+ VMPFGL NAP+TF  
Subjt:  YGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCT

Query:  LINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLG
         +   F +   +FV VYLDDI+++S + EEH  HL  V ++LK   L VK++KC FA E   FLG+ I   +I   + + AAIRD+  PK+V + + FLG
Subjt:  LINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLG

Query:  LANYYRRFVEGFSKRASPL
        + NYYRRF+   SK A P+
Subjt:  LANYYRRFVEGFSKRASPL

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.4e-6340.44Show/hide
Query:  TFMAIPLNSSENSG-ETVSEEIVRVLKKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAP
        T  ++  N++++S  +T     V + +KYR+++ + LP       ++P    + H+IE+ PGA+ P    Y +      E+ K + +LL+  FI P+K+P
Subjt:  TFMAIPLNSSENSG-ETVSEEIVRVLKKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAP

Query:  YGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCT
          +PV+   KKDG+ RLC+DYR LNK T+ + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  KT  VT  G +E+ VMPFGL NAP+TF  
Subjt:  YGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCT

Query:  LINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLG
         +   F +   +FV VYLDDI+++S + EEH  HL  V ++LK   L VK++KC FA E   FLG+ I   +I   + + AAIRD+  PK+V + + FLG
Subjt:  LINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLG

Query:  LANYYRRFVEGFSKRASPL
        + NYYRRF+   SK A P+
Subjt:  LANYYRRFVEGFSKRASPL

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein7.6e-1742Show/hide
Query:  DHLQKVFQKLKENQLYVKREKCSFAQERINFLG--HVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDVLSF
        +HL  V Q  +++Q Y  R+KC+F Q +I +LG  H+I    +  +  ++ A+  W  PK+ +ELR FLGL  YYRRFV+ + K   PLTEL KK+ L +
Subjt:  DHLQKVFQKLKENQLYVKREKCSFAQERINFLG--HVIECGRIGMEEGEIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELPKKDVLSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTGGCCAAATGCTTGGTGATCACTGGACCTACACCCTCGGTTGTACAGACTGACCTACGTCAGCCAGATGGGCTGAAAATGATCTTCGCCATGCAATTAAAGAA
AGGTCTCTCTCGAGACGAACCAACATTTATGGCCATCCCACTCAATTCTTCAGAGAACTCAGGGGAGACAGTCTCTGAGGAGATCGTGCGCGTACTAAAGAAATACCGTG
ATGTGATGCCCGATAGTTTGCCCAAGTCTTTGCCACCTCGGAGAATGATTGATCATGAGATCGAGTTGGTGCCAGGGGCAAAACCGCCTGCGAAGAATGCTTATCGTATG
GCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTGAATGCAGGGTTCATTAGGCCTGCAAAAGCTCCGTATGGGGCCCCGGTTCTCTTCCAGAAGAA
GAAAGATGGGAGTTTACGATTGTGCATTGATTATCGTGCCCTGAATAAACTCACGGTCCGCAACAAGTATCCTCTTCCCATAATTACTGACTTGTTCGATCGCTTACATG
GGGCGAAATATTTTTCAAAGTTAGACTTGCGGTCGGGGTACTACCAAGTAAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAA
TTCCTCGTAATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTCTGTACGTTGATAAACCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGA
TATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTACAAAAGGTTTTTCAAAAATTAAAAGAGAATCAGCTGTATGTCAAAAGAGAAAAATGCTCTTTTG
CACAGGAGCGGATAAACTTCTTGGGCCATGTGATAGAGTGTGGCCGAATTGGAATGGAAGAAGGGGAGATTGCTGCAATACGCGACTGGGCAATGCCGAAATCAGTCTCG
GAGCTACGCTCCTTCCTCGGGCTGGCAAATTACTATCGTCGATTTGTCGAGGGATTCTCCAAACGAGCAAGCCCGCTGACTGAACTACCGAAAAAAGACGTTCTTTCGTT
TAGGTGTCGTCGAGTCACAGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTTGGCCAAATGCTTGGTGATCACTGGACCTACACCCTCGGTTGTACAGACTGACCTACGTCAGCCAGATGGGCTGAAAATGATCTTCGCCATGCAATTAAAGAA
AGGTCTCTCTCGAGACGAACCAACATTTATGGCCATCCCACTCAATTCTTCAGAGAACTCAGGGGAGACAGTCTCTGAGGAGATCGTGCGCGTACTAAAGAAATACCGTG
ATGTGATGCCCGATAGTTTGCCCAAGTCTTTGCCACCTCGGAGAATGATTGATCATGAGATCGAGTTGGTGCCAGGGGCAAAACCGCCTGCGAAGAATGCTTATCGTATG
GCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTGAATGCAGGGTTCATTAGGCCTGCAAAAGCTCCGTATGGGGCCCCGGTTCTCTTCCAGAAGAA
GAAAGATGGGAGTTTACGATTGTGCATTGATTATCGTGCCCTGAATAAACTCACGGTCCGCAACAAGTATCCTCTTCCCATAATTACTGACTTGTTCGATCGCTTACATG
GGGCGAAATATTTTTCAAAGTTAGACTTGCGGTCGGGGTACTACCAAGTAAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAA
TTCCTCGTAATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTCTGTACGTTGATAAACCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGA
TATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTACAAAAGGTTTTTCAAAAATTAAAAGAGAATCAGCTGTATGTCAAAAGAGAAAAATGCTCTTTTG
CACAGGAGCGGATAAACTTCTTGGGCCATGTGATAGAGTGTGGCCGAATTGGAATGGAAGAAGGGGAGATTGCTGCAATACGCGACTGGGCAATGCCGAAATCAGTCTCG
GAGCTACGCTCCTTCCTCGGGCTGGCAAATTACTATCGTCGATTTGTCGAGGGATTCTCCAAACGAGCAAGCCCGCTGACTGAACTACCGAAAAAAGACGTTCTTTCGTT
TAGGTGTCGTCGAGTCACAGTGTGA
Protein sequenceShow/hide protein sequence
MPLAKCLVITGPTPSVVQTDLRQPDGLKMIFAMQLKKGLSRDEPTFMAIPLNSSENSGETVSEEIVRVLKKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRM
APPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFE
FLVMPFGLTNAPATFCTLINQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGEIAAIRDWAMPKSVS
ELRSFLGLANYYRRFVEGFSKRASPLTELPKKDVLSFRCRRVTV