| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0042119.1 pol protein [Cucumis melo var. makuwa] | 7.8e-50 | 91.15 | Show/hide |
Query: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
+FGLTN PAVFMDLMNRVFREFLDTFVI+FIDDILIYSKTEAEHE+ LRMVLQTLRDN LYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTSW
Subjt: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
Query: RPSTVNEVCSFLG
RPSTV+EV SFLG
Subjt: RPSTVNEVCSFLG
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| KAA0046049.1 pol protein [Cucumis melo var. makuwa] | 7.8e-50 | 91.15 | Show/hide |
Query: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
+FGLTN PAVFMDLMNRVFREFLDTFVI+FIDDILIYSKTEAEHE+ LRMVLQTLRDN LYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTSW
Subjt: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
Query: RPSTVNEVCSFLG
RPSTV+EV SFLG
Subjt: RPSTVNEVCSFLG
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| KAA0059783.1 pol protein [Cucumis melo var. makuwa] | 1.0e-49 | 90.27 | Show/hide |
Query: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
+FGLTN PAVFMDLMN+VFREFLDTFVI+FIDDILIYSK EAEHE+ LRMVLQTLRDN LYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTSWP
Subjt: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
Query: RPSTVNEVCSFLG
RPSTV+EV SFLG
Subjt: RPSTVNEVCSFLG
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| KAA0067899.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.9e-50 | 90.27 | Show/hide |
Query: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
+FGLTN PAVFMDLMNRVFREFLDTFVI+FIDDILIYSKTEAEHE+ LRMVLQTLRDN YAKFSKCEFWLKQVSFLGHVVSK GVS+DPAKIEAVTSWP
Subjt: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
Query: RPSTVNEVCSFLG
RPSTV+EV SFLG
Subjt: RPSTVNEVCSFLG
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| TYK07886.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.9e-50 | 90.27 | Show/hide |
Query: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
+FGLTN PAVFMDLMNRVFREFLDTFVI+FIDDILIYSKTEAEHE+ LRMVLQTLRDN LYAKFSKCEFWLKQ+SFLGHVVSK GVSVDP KIEAVTSWP
Subjt: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
Query: RPSTVNEVCSFLG
RPSTV+EV SFLG
Subjt: RPSTVNEVCSFLG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TLA3 Pol protein | 3.8e-50 | 91.15 | Show/hide |
Query: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
+FGLTN PAVFMDLMNRVFREFLDTFVI+FIDDILIYSKTEAEHE+ LRMVLQTLRDN LYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTSW
Subjt: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
Query: RPSTVNEVCSFLG
RPSTV+EV SFLG
Subjt: RPSTVNEVCSFLG
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| A0A5A7TXS2 Reverse transcriptase | 3.8e-50 | 91.15 | Show/hide |
Query: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
+FGLTN PAVFMDLMNRVFREFLDTFVI+FIDDILIYSKTEAEHE+ LRMVLQTLRDN LYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTSW
Subjt: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
Query: RPSTVNEVCSFLG
RPSTV+EV SFLG
Subjt: RPSTVNEVCSFLG
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| A0A5A7UV33 Pol protein | 4.9e-50 | 90.27 | Show/hide |
Query: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
+FGLTN PAVFMDLMN+VFREFLDTFVI+FIDDILIYSK EAEHE+ LRMVLQTLRDN LYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTSWP
Subjt: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
Query: RPSTVNEVCSFLG
RPSTV+EV SFLG
Subjt: RPSTVNEVCSFLG
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| A0A5A7VRW0 Ty3-gypsy retrotransposon protein | 2.9e-50 | 90.27 | Show/hide |
Query: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
+FGLTN PAVFMDLMNRVFREFLDTFVI+FIDDILIYSKTEAEHE+ LRMVLQTLRDN YAKFSKCEFWLKQVSFLGHVVSK GVS+DPAKIEAVTSWP
Subjt: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
Query: RPSTVNEVCSFLG
RPSTV+EV SFLG
Subjt: RPSTVNEVCSFLG
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| A0A5D3CBZ8 Ty3-gypsy retrotransposon protein | 2.9e-50 | 90.27 | Show/hide |
Query: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
+FGLTN PAVFMDLMNRVFREFLDTFVI+FIDDILIYSKTEAEHE+ LRMVLQTLRDN LYAKFSKCEFWLKQ+SFLGHVVSK GVSVDP KIEAVTSWP
Subjt: AFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTSWP
Query: RPSTVNEVCSFLG
RPSTV+EV SFLG
Subjt: RPSTVNEVCSFLG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.6e-18 | 37.61 | Show/hide |
Query: YRRQAFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAV
Y R FGL N PA F MN + R L+ ++++DDI+++S + EH + L +V + L L + KCEF ++ +FLGHV++ G+ +P KIEA+
Subjt: YRRQAFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAV
Query: TSWPRPSTVNEVCSFLG
+P P+ E+ +FLG
Subjt: TSWPRPSTVNEVCSFLG
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| P0CT41 Transposon Tf2-12 polyprotein | 7.6e-16 | 35.9 | Show/hide |
Query: YRRQAFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAV
Y +G++ PA F +N + E ++ V+ ++DDILI+SK+E+EH K ++ VLQ L++ L +KCEF QV F+G+ +S+ G + I+ V
Subjt: YRRQAFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAV
Query: TSWPRPSTVNEVCSFLG
W +P E+ FLG
Subjt: TSWPRPSTVNEVCSFLG
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 7.6e-16 | 34.78 | Show/hide |
Query: RQAFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTS
R FGL N ++F ++ V RE + +++DD++I+S+ E++H + + VL+ L D + K F+ + V +LG +VSK G DP K++A+
Subjt: RQAFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTS
Query: WPRPSTVNEVCSFLG
+P P V +V SFLG
Subjt: WPRPSTVNEVCSFLG
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 3.9e-20 | 38.46 | Show/hide |
Query: YRRQAFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAV
Y R FGL N PA F MN + R L+ ++++DDI+I+S + EH +++V L D L + KCEF K+ +FLGH+V+ G+ +P K++A+
Subjt: YRRQAFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAV
Query: TSWPRPSTVNEVCSFLG
S+P P+ E+ +FLG
Subjt: TSWPRPSTVNEVCSFLG
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 2.4e-17 | 36.75 | Show/hide |
Query: YRRQAFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAV
+ R FGL N PA+F +++ + RE + ++IDDI+++S+ H K LR+VL +L L K F QV FLG++V+ G+ DP K+ A+
Subjt: YRRQAFGLTNTPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEKRLRMVLQTLRDNTLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAV
Query: TSWPRPSTVNEVCSFLG
+ P P++V E+ FLG
Subjt: TSWPRPSTVNEVCSFLG
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