| GenBank top hits | e value | %identity | Alignment |
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| KAA0037906.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.2e-84 | 85.19 | Show/hide |
Query: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
MRLCIDYRELNKV VKNRYPLP IDDLFDQLQGA VFSKI L SGY +LRIRD DIPK AFC RY HYEF+VMSFGLTN PAVFMDLMNRVFKD LD+FV
Subjt: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
Query: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
IVFIDDIL+YSK EAEH EHLHQV ETLRANKLYAKFSKCE WL+K +FL HVVSSEGVSVDP KIEAVT+ PRPSTVSE+RSFLGLAG
Subjt: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
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| KAA0057168.1 pol protein [Cucumis melo var. makuwa] | 3.4e-84 | 85.71 | Show/hide |
Query: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
M LCIDYRELNKV VKNRYPLP IDDLFDQLQGAIVFSKI L SGY +LRIRDSDIPK FC RY HYEFIVMSFGLTN PAVFMDLMNRVFKD LD+FV
Subjt: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
Query: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
IVFIDDIL+YSK EAEH EHL QV ETLRAN+LYAKFSKCE WLKK SFL HVVSSEGVSVDP KIEAVT+ PRPSTVSE+RSFLGLAG
Subjt: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
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| KAA0062264.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.7e-88 | 93.89 | Show/hide |
Query: ELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFVIVFIDDIL
ELNKVIVKN YPLPIIDDLFDQLQGA VFSK LGSGYDRLRIRDSDIPKIAFCFRY+HYEFIVMSFGLTN PAVFMDLMNRVFKD LDTFVIVFIDDIL
Subjt: ELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFVIVFIDDIL
Query: VYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLA
VYSKKEAEHGEHLH VWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEA TS PRPSTVSEV SFLGLA
Subjt: VYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLA
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| TYK01306.1 pol protein [Cucumis melo var. makuwa] | 4.5e-84 | 85.71 | Show/hide |
Query: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
MRLCIDYRELNKV VKNRYPLP IDDLFDQLQGA VFSKI L SGY +LRIRDSDIPK AF RY HYEFIVMSFGLTN PAVFMDLMNRVFKD LD+FV
Subjt: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
Query: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
IVFIDDIL+YSK EAEH EHLHQV ETLRANKLYAKFSKCE WL+K +FL HVVSSEGVSVDP KIEAVT+ PRPSTVSE+RSFLGLAG
Subjt: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
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| TYK05193.1 pol protein [Cucumis melo var. makuwa] | 7.6e-84 | 85.19 | Show/hide |
Query: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
MRLCIDYRELNKV VKNRYPLP IDDLFDQLQGA VFSKI L SGY +LRIRD DIPK AF RY HYEF+VMSFGLTN PAVFMDLMNRVFKD LD+FV
Subjt: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
Query: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
IVFIDDIL+YSK EAEH EHLHQV ETLRANKLYAKFSKCE WL+K +FL HVVSSEGVSVDPTKIEAVT+ PRPSTVSE+RSFLGLAG
Subjt: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7T6U3 Reverse transcriptase | 5.7e-85 | 85.19 | Show/hide |
Query: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
MRLCIDYRELNKV VKNRYPLP IDDLFDQLQGA VFSKI L SGY +LRIRD DIPK AFC RY HYEF+VMSFGLTN PAVFMDLMNRVFKD LD+FV
Subjt: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
Query: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
IVFIDDIL+YSK EAEH EHLHQV ETLRANKLYAKFSKCE WL+K +FL HVVSSEGVSVDP KIEAVT+ PRPSTVSE+RSFLGLAG
Subjt: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
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| A0A5A7UPX4 Pol protein | 1.7e-84 | 85.71 | Show/hide |
Query: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
M LCIDYRELNKV VKNRYPLP IDDLFDQLQGAIVFSKI L SGY +LRIRDSDIPK FC RY HYEFIVMSFGLTN PAVFMDLMNRVFKD LD+FV
Subjt: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
Query: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
IVFIDDIL+YSK EAEH EHL QV ETLRAN+LYAKFSKCE WLKK SFL HVVSSEGVSVDP KIEAVT+ PRPSTVSE+RSFLGLAG
Subjt: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
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| A0A5A7V4N7 Ty3-gypsy retrotransposon protein | 8.5e-89 | 93.89 | Show/hide |
Query: ELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFVIVFIDDIL
ELNKVIVKN YPLPIIDDLFDQLQGA VFSK LGSGYDRLRIRDSDIPKIAFCFRY+HYEFIVMSFGLTN PAVFMDLMNRVFKD LDTFVIVFIDDIL
Subjt: ELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFVIVFIDDIL
Query: VYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLA
VYSKKEAEHGEHLH VWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEA TS PRPSTVSEV SFLGLA
Subjt: VYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLA
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| A0A5D3BSV9 Reverse transcriptase | 2.2e-84 | 85.71 | Show/hide |
Query: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
MRLCIDYRELNKV VKNRYPLP IDDLFDQLQGA VFSKI L SGY +LRIRDSDIPK AF RY HYEFIVMSFGLTN PAVFMDLMNRVFKD LD+FV
Subjt: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
Query: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
IVFIDDIL+YSK EAEH EHLHQV ETLRANKLYAKFSKCE WL+K +FL HVVSSEGVSVDP KIEAVT+ PRPSTVSE+RSFLGLAG
Subjt: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
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| A0A5D3BZN1 Reverse transcriptase | 3.7e-84 | 85.19 | Show/hide |
Query: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
MRLCIDYRELNKV VKNRYPLP IDDLFDQLQGA VFSKI L SGY +LRIRD DIPK AF RY HYEF+VMSFGLTN PAVFMDLMNRVFKD LD+FV
Subjt: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
Query: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
IVFIDDIL+YSK EAEH EHLHQV ETLRANKLYAKFSKCE WL+K +FL HVVSSEGVSVDPTKIEAVT+ PRPSTVSE+RSFLGLAG
Subjt: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 4.9e-33 | 36.17 | Show/hide |
Query: RLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFVI
R+ IDYR+LN++ V +R+P+P +D++ +L F+ I L G+ ++ + + K AF ++ HYE++ M FGL N PA F MN + + +L+ +
Subjt: RLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFVI
Query: VFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
V++DDI+V+S EH + L V+E L L + KCE ++ +FL HV++ +G+ +P KIEA+ P P+ E+++FLGL G
Subjt: VFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
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| P0CT41 Transposon Tf2-12 polyprotein | 4.3e-29 | 33.33 | Show/hide |
Query: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
+R+ +DY+ LNK + N YPLP+I+ L ++QG+ +F+K+ L S Y +R+R D K+AF +E++VM +G++ PA F +N + + ++ V
Subjt: MRLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFV
Query: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLG
+ ++DDIL++SK E+EH +H+ V + L+ L +KCE + F+ + +S +G + I+ V +P E+R FLG
Subjt: IVFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLG
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 3.4e-34 | 36.17 | Show/hide |
Query: RLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFVI
R+ IDYR+LN++ + +RYP+P +D++ +L F+ I L G+ ++ + + I K AF + HYE++ M FGL N PA F MN + + +L+ +
Subjt: RLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFVI
Query: VFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
V++DDI+++S EH + V+ L L + KCE K+A+FL H+V+ +G+ +P K++A+ S P P+ E+R+FLGL G
Subjt: VFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGLAG
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 3.3e-29 | 36.56 | Show/hide |
Query: RLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFVI
RLC+DYR LNK + + +PLP ID+L ++ A +F+ + L SGY ++ + D K AF YE+ VM FGL N P+ F M F+D+ FV
Subjt: RLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFVI
Query: VFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGL
V++DDIL++S+ EH +HL V E L+ L K KC+ ++ FL + + + ++ K A+ P P TV + + FLG+
Subjt: VFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 3.3e-29 | 36.56 | Show/hide |
Query: RLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFVI
RLC+DYR LNK + + +PLP ID+L ++ A +F+ + L SGY ++ + D K AF YE+ VM FGL N P+ F M F+D+ FV
Subjt: RLCIDYRELNKVIVKNRYPLPIIDDLFDQLQGAIVFSKICLGSGYDRLRIRDSDIPKIAFCFRYKHYEFIVMSFGLTNVPAVFMDLMNRVFKDVLDTFVI
Query: VFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGL
V++DDIL++S+ EH +HL V E L+ L K KC+ ++ FL + + + ++ K A+ P P TV + + FLG+
Subjt: VFIDDILVYSKKEAEHGEHLHQVWETLRANKLYAKFSKCEVWLKKASFLSHVVSSEGVSVDPTKIEAVTSLPRPSTVSEVRSFLGL
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