CuGenDBv2

Gene ID	Cmc05g0135751
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr05:18266008..18268470
RNA-Seq Expression	Cmc05g0135751
Synteny	Cmc05g0135751
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR036397 - Ribonuclease H superfamily IPR021109 - Aspartic peptidase domain superfamily IPR012337 - Ribonuclease H-like superfamily IPR001584 - Integrase, catalytic core

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031931.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.02

Show/hide

Query:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKE+VKACQIEIAGHVIEVTLLVLDML+FDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCI
Subjt:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
        DYRELNKVTV NRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Subjt:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID

Query:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL
        DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR FVENFSRIA PL
Subjt:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL

Query:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
        TQLTRKGAPFVWSKA                          FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
Subjt:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY

Query:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
        GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP K NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVT QLAQLTVQ TL
Subjt:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL

Query:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
        RQRII AQ NDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDSA+KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVC
Subjt:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC

Query:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
        QQVKAPRQKPAGLLQPLSIPEWKWEN+SMDFITGLPRTLRGF VIWVVVDRLTKSAHFV GKSTYTASKWAQLYMSEIVRLHGVPVSIV DRDARFTSKF
Subjt:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF

Query:  WKGLQTAMGTRLDFSTAFHP
        WKGLQTAMGTRLDFSTAFHP
Subjt:  WKGLQTAMGTRLDFSTAFHP

KAA0040188.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.63

Show/hide

Query:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKE+VKACQIEIA HVIEVTLLVLDML+FDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
        DYRELNKVTV NRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF+EFLDTFVIVFID
Subjt:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID

Query:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL
        DILIYSK EAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR FVENFSRIATPL
Subjt:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL

Query:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
        TQLTRKGAPFVWSKA                          FVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV+FALKIWRHYLY
Subjt:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY

Query:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
        GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITR APLHRDLERAEIAVSVGA+TMQLAQLTVQPTL
Subjt:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL

Query:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
        RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIK ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
Subjt:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC

Query:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
        QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTY ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTS+F
Subjt:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF

Query:  WKGLQTAMGTRLDFSTAFHP
        WKGLQTAMGTRLDFSTAFHP
Subjt:  WKGLQTAMGTRLDFSTAFHP

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.02

Show/hide

Query:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKE+VK CQIEIAGHVIEVTLLVLDML+FDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
        DYRELNKVTV NRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Subjt:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID

Query:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL
        DILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR FVENFSRIATPL
Subjt:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL

Query:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
        TQLTRKGAPFVWSKA                          FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
Subjt:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY

Query:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
        GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
Subjt:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL

Query:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
        RQRII AQSNDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDS +KTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVC
Subjt:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC

Query:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
        QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Subjt:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF

Query:  WKGLQTAMGTRLDFSTAFHP
        WK LQTAMGTRLDFSTAFHP
Subjt:  WKGLQTAMGTRLDFSTAFHP

KAA0053368.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.88

Show/hide

Query:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKERVKACQIEIAGHVIEVTLLVLDML+FDVILGMDWLAANHASIDCSRK VTFNPPSMASFKFKGGGSRSLPQVISAIRASKL SQGTWGILASVVD
Subjt:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
        DYRELNKVTV NRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM+LMNRVFREFLDTFVIVFID
Subjt:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID

Query:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL
        DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR FVENFSRIATPL
Subjt:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL

Query:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
        TQLTRKGAPFVWSKA                          FVIYSDASKKGLGCVLMQQ KVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
Subjt:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY

Query:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
        GEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TL
Subjt:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL

Query:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
        RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGL FERRLCVPSDS IKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
Subjt:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC

Query:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
        QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKS HFV GKST TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Subjt:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF

Query:  WKGLQTAMGTRLDFSTAFHP
        WKGLQTAMGTRLDFSTAFHP
Subjt:  WKGLQTAMGTRLDFSTAFHP

TYK01613.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.39

Show/hide

Query:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKE+VKACQIEIAGHVIEVTL+VLDML+FDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
        DYRELNKVTV NRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Subjt:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID

Query:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL
        DILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR FVENFSRIATPL
Subjt:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL

Query:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
        TQLTRKGAPFVWSKA                          FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
Subjt:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY

Query:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
        GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
Subjt:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL

Query:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
        RQRII AQSNDPYLVEKRGLAEAGQ   FS+SSDGGL+FERRLCVPSDSA+KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVC
Subjt:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC

Query:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
        QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Subjt:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF

Query:  WKGLQTAMGTRLDFSTAFHP
        WKGLQTAMGTRLDFSTAFHP
Subjt:  WKGLQTAMGTRLDFSTAFHP

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SQU8 Reverse transcriptase

0.0e+00

94.02

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Query:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKE+VKACQIEIAGHVIEVTLLVLDML+FDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCI
Subjt:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
        DYRELNKVTV NRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Subjt:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID

Query:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL
        DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR FVENFSRIA PL
Subjt:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL

Query:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
        TQLTRKGAPFVWSKA                          FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
Subjt:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY

Query:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
        GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP K NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVT QLAQLTVQ TL
Subjt:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL

Query:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
        RQRII AQ NDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDSA+KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVC
Subjt:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC

Query:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
        QQVKAPRQKPAGLLQPLSIPEWKWEN+SMDFITGLPRTLRGF VIWVVVDRLTKSAHFV GKSTYTASKWAQLYMSEIVRLHGVPVSIV DRDARFTSKF
Subjt:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF

Query:  WKGLQTAMGTRLDFSTAFHP
        WKGLQTAMGTRLDFSTAFHP
Subjt:  WKGLQTAMGTRLDFSTAFHP

A0A5A7TB42 Reverse transcriptase

0.0e+00

94.63

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Query:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKE+VKACQIEIA HVIEVTLLVLDML+FDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
        DYRELNKVTV NRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF+EFLDTFVIVFID
Subjt:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID

Query:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL
        DILIYSK EAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR FVENFSRIATPL
Subjt:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL

Query:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
        TQLTRKGAPFVWSKA                          FVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV+FALKIWRHYLY
Subjt:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY

Query:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
        GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITR APLHRDLERAEIAVSVGA+TMQLAQLTVQPTL
Subjt:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL

Query:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
        RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIK ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
Subjt:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC

Query:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
        QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTY ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTS+F
Subjt:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF

Query:  WKGLQTAMGTRLDFSTAFHP
        WKGLQTAMGTRLDFSTAFHP
Subjt:  WKGLQTAMGTRLDFSTAFHP

A0A5A7U330 Reverse transcriptase

0.0e+00

94.02

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Query:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKE+VK CQIEIAGHVIEVTLLVLDML+FDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
        DYRELNKVTV NRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Subjt:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID

Query:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL
        DILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR FVENFSRIATPL
Subjt:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL

Query:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
        TQLTRKGAPFVWSKA                          FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
Subjt:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY

Query:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
        GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
Subjt:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL

Query:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
        RQRII AQSNDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDS +KTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVC
Subjt:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC

Query:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
        QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Subjt:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF

Query:  WKGLQTAMGTRLDFSTAFHP
        WK LQTAMGTRLDFSTAFHP
Subjt:  WKGLQTAMGTRLDFSTAFHP

A0A5A7UE75 Reverse transcriptase

0.0e+00

94.88

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Query:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKERVKACQIEIAGHVIEVTLLVLDML+FDVILGMDWLAANHASIDCSRK VTFNPPSMASFKFKGGGSRSLPQVISAIRASKL SQGTWGILASVVD
Subjt:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
        DYRELNKVTV NRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM+LMNRVFREFLDTFVIVFID
Subjt:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID

Query:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL
        DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR FVENFSRIATPL
Subjt:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL

Query:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
        TQLTRKGAPFVWSKA                          FVIYSDASKKGLGCVLMQQ KVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
Subjt:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY

Query:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
        GEKIQI TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TL
Subjt:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL

Query:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
        RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGL FERRLCVPSDS IKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
Subjt:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC

Query:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
        QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKS HFV GKST TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Subjt:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF

Query:  WKGLQTAMGTRLDFSTAFHP
        WKGLQTAMGTRLDFSTAFHP
Subjt:  WKGLQTAMGTRLDFSTAFHP

A0A5D3BPI1 Reverse transcriptase

0.0e+00

94.39

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Query:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD
        MLSKE+VKACQIEIAGHVIEVTL+VLDML+FDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLLSQGTWGILASVVD
Subjt:  MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD

Query:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
        TRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Subjt:  TREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI

Query:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
        DYRELNKVTV NRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Subjt:  DYRELNKVTVNNRYPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID

Query:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL
        DILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR FVENFSRIATPL
Subjt:  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL

Query:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
        TQLTRKGAPFVWSKA                          FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
Subjt:  TQLTRKGAPFVWSKA--------------------------FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY

Query:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
        GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
Subjt:  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL

Query:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC
        RQRII AQSNDPYLVEKRGLAEAGQ   FS+SSDGGL+FERRLCVPSDSA+KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVC
Subjt:  RQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVC

Query:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
        QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Subjt:  QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF

Query:  WKGLQTAMGTRLDFSTAFHP
        WKGLQTAMGTRLDFSTAFHP
Subjt:  WKGLQTAMGTRLDFSTAFHP

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.4e-105

31.64

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Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVNNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVNNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVW----------
        L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R F+   S++  PL  L +K   + W          
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVW----------

Query:  ----------------SKAFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
                        SK  ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  ----------------SKAFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPY
          T +    N R  RW   ++D++ EI Y PG  N +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPY

Query:  LVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAG
        L+      +    E   +  DG L+  + ++ +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G
Subjt:  LVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAG

Query:  LLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRL
         LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  V    + TA + A+++   ++   G P  I++D D  FTS+ WK         +
Subjt:  LLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRL

Query:  DFSTAFHP
         FS  + P
Subjt:  DFSTAFHP

P0CT35 Transposon Tf2-2 polyprotein

1.4e-105

31.64

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Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVNNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVNNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVW----------
        L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R F+   S++  PL  L +K   + W          
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVW----------

Query:  ----------------SKAFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
                        SK  ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  ----------------SKAFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPY
          T +    N R  RW   ++D++ EI Y PG  N +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPY

Query:  LVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAG
        L+      +    E   +  DG L+  + ++ +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G
Subjt:  LVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAG

Query:  LLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRL
         LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  V    + TA + A+++   ++   G P  I++D D  FTS+ WK         +
Subjt:  LLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRL

Query:  DFSTAFHP
         FS  + P
Subjt:  DFSTAFHP

P0CT41 Transposon Tf2-12 polyprotein

1.4e-105

31.64

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Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVNNRYPLPRIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVNNRYPLPRIDDL

Query:  FDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVW----------
        L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R F+   S++  PL  L +K   + W          
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVW----------

Query:  ----------------SKAFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
                        SK  ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  ----------------SKAFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPY
          T +    N R  RW   ++D++ EI Y PG  N +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPY

Query:  LVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAG
        L+      +    E   +  DG L+  + ++ +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G
Subjt:  LVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAG

Query:  LLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRL
         LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  V    + TA + A+++   ++   G P  I++D D  FTS+ WK         +
Subjt:  LLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRL

Query:  DFSTAFHP
         FS  + P
Subjt:  DFSTAFHP

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein

1.5e-107

34.18

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Query:  YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVNNR
        Y ++   +LP  P    +  V+  IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+++ 
Subjt:  YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVNNR

Query:  YPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE
        +PLPRID+L  ++  A +F+ +DL S YHQ+ ++  D  KTAF +  G YE+ VM FGL NAP+ F   M   FR+    FV V++DDILI+S++  EH 
Subjt:  YPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE

Query:  EHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL-------TQLTRK
        +HL  VL+ L++  L  K  KC+F  ++  FLG+ +    ++    K  A+  +  P TV + + FLG+  YYR F+ N S+IA P+       +Q T K
Subjt:  EHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL-------TQLTRK

Query:  G-----------------APFVWSKAFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTD
                           PF     + + +DASK G+G VL +         VV Y S+ L+S ++NYP  +LEL  ++ AL  +R+ L+G+   + TD
Subjt:  G-----------------APFVWSKAFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTD

Query:  HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQS
        H SL     + E   R +RWL+ +  YD  + Y  G  NVVADA+SR +       +R           +      AV + + +LT      + +   +S
Subjt:  HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQS

Query:  NDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQK
              +K  L+E  + + +S+  D  + ++ RL VP         L   H+  F  H G T     +  +Y+W  ++  + +++  C+ CQ +K+ R +
Subjt:  NDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQK

Query:  PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG
          GLLQPL I E +W ++SMDF+TGLP T     +I VVVDR +K AHF+  + T  A++   L    I   HG P +I SDRD R T+  ++ L   +G
Subjt:  PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG

Query:  TRLDFSTAFHP
         +   S+A HP
Subjt:  TRLDFSTAFHP

Q99315 Transposon Ty3-G Gag-Pol polyprotein

1.1e-107

34.32

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Query:  YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVNNR
        Y ++   +LP  P    +  V+  IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+++ 
Subjt:  YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVNNR

Query:  YPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE
        +PLPRID+L  ++  A +F+ +DL S YHQ+ ++  D  KTAF +  G YE+ VM FGL NAP+ F   M   FR+    FV V++DDILI+S++  EH 
Subjt:  YPLPRIDDLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE

Query:  EHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL-------TQLTRK
        +HL  VL+ L++  L  K  KC+F  ++  FLG+ +    ++    K  A+  +  P TV + + FLG+  YYR F+ N S+IA P+       +Q T K
Subjt:  EHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPL-------TQLTRK

Query:  G-----------------APFVWSKAFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTD
                           PF     + + +DASK G+G VL +         VV Y S+ L+S ++NYP  +LEL  ++ AL  +R+ L+G+   + TD
Subjt:  G-----------------APFVWSKAFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTD

Query:  HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQS
        H SL     + E   R +RWL+ +  YD  + Y  G  NVVADA+SR V       +R           +      AV + + +LT      + +   +S
Subjt:  HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQS

Query:  NDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQK
              +K  L+E  + + +S+  D  + ++ RL VP         L   H+  F  H G T     +  +Y+W  ++  + +++  C+ CQ +K+ R +
Subjt:  NDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQK

Query:  PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG
          GLLQPL I E +W ++SMDF+TGLP T     +I VVVDR +K AHF+  + T  A++   L    I   HG P +I SDRD R T+  ++ L   +G
Subjt:  PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG

Query:  TRLDFSTAFHP
         +   S+A HP
Subjt:  TRLDFSTAFHP

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.8e-21

47.92

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Query:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGA
        HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYR FV+N+ +I  PLT+L +K +
Subjt:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGTCGAAGGAAAGGGTGAAAGCATGCCAGATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGTTAGTCCTGGATATGCTCAACTTTGATGTAATCCTGGGTAT
GGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCCCGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAGGTCGT
TGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCA
GAACCGGTGGTGAGGGATTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTAT
ATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTG
CGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAATAACAGATATCCCTTGCCCAGGATCGAC
GATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGAATACCATCAGCTGAGGATTAAGGATGGGGATGTACCGAAGACAGCATTTCG
TTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTT
TTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTGTATGCA
AAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTG
GACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGATGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGA
CCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTAT
GCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTAAAAATATGGAGGCATTATTTATATGGTGAAAA
GATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGA
TACTGTATCATCCAGGCAAGACAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAG
CGGGCCGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTAACGGTACAGCCGACTTTGAGGCAAAGGATCATTGGTGCTCAGAGTAACGATCCTTA
TTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGAGGGGTTCTCCATATCCTCTGATGGTGGACTTGTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTG
CGATTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAAATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATG
AAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAA
GTGGGAAAACGTATCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGGCTTACCAAATCAGCGCACTTCGTTC
TGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCGGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTC
ACTTCCAAATTCTGGAAGGGTTTGCAGACGGCTATGGGAACGAGGTTAGACTTTAGTACAGCTTTCCATCCATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLSKERVKACQIEIAGHVIEVTLLVLDMLNFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSS
EPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVNNRYPLPRID
DLFDQLQGATVFSKIDLRSEYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYA
KFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSKAFVIYSDASKKGLGCVLMQQGKVVAY
ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALITRQAPLHRDLE
RAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNM
KREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARF
TSKFWKGLQTAMGTRLDFSTAFHP

Cmc05g0135751 (gene) of Melon (Charmono) v1.1 genome