CuGenDBv2

Gene ID	Cmc05g0136151
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr05:19038348..19040871
RNA-Seq Expression	Cmc05g0136151
Synteny	Cmc05g0136151
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025917.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.58

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
        TAFRS                          RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
Subjt:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
        VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASK GL
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT
        LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT
Subjt:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF

Query:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        EKKGKLSPRFVGPFEILER+GPVAYRLALPPSLSAVHDVFHVSMLRR V
Subjt:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV

KAA0025998.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.64

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
        TAFRS                          RVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEG
Subjt:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
        VSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GL
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        G VLMQQGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT
        LSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKT
Subjt:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        K+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF

Query:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV
         KKGKLSPRFVGPFEILER+GPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV

TYK01576.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.64

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
        TAFRS                          RVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEG
Subjt:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
        VSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GL
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        G VLMQQGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT
        LSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKT
Subjt:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        K+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF

Query:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV
         KKGKLSPRFVGPFEILER+GPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV

TYK06888.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.64

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
        TAFRS                          RVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEG
Subjt:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
        VSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GL
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        G VLMQQGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT
        LSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKT
Subjt:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        K+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF

Query:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV
         KKGKLSPRFVGPFEILER+GPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV

TYK20443.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.64

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
        TAFRS                          RVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEG
Subjt:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
        VSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GL
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        G VLMQQGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT
        LSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKT
Subjt:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        K+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF

Query:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV
         KKGKLSPRFVGPFEILER+GPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIJ5 Reverse transcriptase

0.0e+00

93.64

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
        TAFRS                          RVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEG
Subjt:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
        VSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GL
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        G VLMQQGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT
        LSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKT
Subjt:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        K+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF

Query:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV
         KKGKLSPRFVGPFEILER+GPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5A7TP01 Reverse transcriptase

0.0e+00

96.58

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
        TAFRS                          RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
Subjt:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
        VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASK GL
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT
        LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT
Subjt:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF

Query:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        EKKGKLSPRFVGPFEILER+GPVAYRLALPPSLSAVHDVFHVSMLRR V
Subjt:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5A7V2A0 Reverse transcriptase

0.0e+00

93.64

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
        TAFRS                          RVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEG
Subjt:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
        VSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GL
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        G VLMQQGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT
        LSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKT
Subjt:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        K+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF

Query:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV
         KKGKLSPRFVGPFEILER+GPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5D3BTN0 Reverse transcriptase

0.0e+00

93.64

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
        TAFRS                          RVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEG
Subjt:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
        VSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GL
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        G VLMQQGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT
        LSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKT
Subjt:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        K+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF

Query:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV
         KKGKLSPRFVGPFEILER+GPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5D3C6W3 Reverse transcriptase

0.0e+00

93.64

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
        TAFRS                          RVFKDFLD FVIVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEG
Subjt:  TAFRS--------------------------RVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
        VSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASK GL
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        G VLMQQGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT
        LSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQL DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKT
Subjt:  LSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKT

Query:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
        ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT
Subjt:  ELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLT

Query:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
        K+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH
Subjt:  KTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF

Query:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV
         KKGKLSPRFVGPFEILER+GPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  EKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSV

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.7e-127

31.82

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFR--------------------------SRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
         AFR                          + +  +  +  V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G
Subjt:  TAFR--------------------------SRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
         +     ++ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGK-----VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GGVLMQQGK-----VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--
        G AN +ADALSR       ++ +  P+ +D E   I          + Q+++    + +++    +D  L     +   ++  E +I   DGL+   +  
Subjt:  GKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--

Query:  LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY
        + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY
Subjt:  LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY

Query:  TVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVL
          ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVL

Query:  EFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMV
            +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V
Subjt:  EFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMV

Query:  FLKVAPMKGVLRFEKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAV-HDVFHVSMLRR
         +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  FLKVAPMKGVLRFEKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT35 Transposon Tf2-2 polyprotein

1.7e-127

31.82

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFR--------------------------SRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
         AFR                          + +  +  +  V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G
Subjt:  TAFR--------------------------SRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
         +     ++ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGK-----VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GGVLMQQGK-----VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--
        G AN +ADALSR       ++ +  P+ +D E   I          + Q+++    + +++    +D  L     +   ++  E +I   DGL+   +  
Subjt:  GKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--

Query:  LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY
        + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY
Subjt:  LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY

Query:  TVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVL
          ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVL

Query:  EFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMV
            +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V
Subjt:  EFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMV

Query:  FLKVAPMKGVLRFEKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAV-HDVFHVSMLRR
         +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  FLKVAPMKGVLRFEKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT36 Transposon Tf2-3 polyprotein

1.7e-127

31.82

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFR--------------------------SRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
         AFR                          + +  +  +  V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G
Subjt:  TAFR--------------------------SRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
         +     ++ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGK-----VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GGVLMQQGK-----VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--
        G AN +ADALSR       ++ +  P+ +D E   I          + Q+++    + +++    +D  L     +   ++  E +I   DGL+   +  
Subjt:  GKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--

Query:  LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY
        + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY
Subjt:  LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY

Query:  TVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVL
          ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVL

Query:  EFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMV
            +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V
Subjt:  EFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMV

Query:  FLKVAPMKGVLRFEKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAV-HDVFHVSMLRR
         +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  FLKVAPMKGVLRFEKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT37 Transposon Tf2-4 polyprotein

1.7e-127

31.82

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFR--------------------------SRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
         AFR                          + +  +  +  V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G
Subjt:  TAFR--------------------------SRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
         +     ++ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGK-----VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GGVLMQQGK-----VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--
        G AN +ADALSR       ++ +  P+ +D E   I          + Q+++    + +++    +D  L     +   ++  E +I   DGL+   +  
Subjt:  GKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--

Query:  LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY
        + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY
Subjt:  LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY

Query:  TVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVL
          ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVL

Query:  EFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMV
            +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V
Subjt:  EFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMV

Query:  FLKVAPMKGVLRFEKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAV-HDVFHVSMLRR
         +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  FLKVAPMKGVLRFEKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT41 Transposon Tf2-12 polyprotein

1.7e-127

31.82

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPK

Query:  TAFR--------------------------SRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG
         AFR                          + +  +  +  V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G
Subjt:  TAFR--------------------------SRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEG

Query:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL
         +     ++ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGL

Query:  GGVLMQQGK-----VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GGVLMQQGK-----VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--
        G AN +ADALSR       ++ +  P+ +D E   I          + Q+++    + +++    +D  L     +   ++  E +I   DGL+   +  
Subjt:  GKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--

Query:  LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY
        + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY
Subjt:  LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY

Query:  TVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVL
          ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVL

Query:  EFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMV
            +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V
Subjt:  EFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMV

Query:  FLKVAPMKGVLRFEKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAV-HDVFHVSMLRR
         +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  FLKVAPMKGVLRFEKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAV-HDVFHVSMLRR

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.6e-27

44.27

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Query:  HLHQVLETLRAHKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW
        HL  VL+    H+ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP P   +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W
Subjt:  HLHQVLETLRAHKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW

Query:  SPACESSFQELKQKLVTAPVLTVPDGSGSFV
        +     +F+ LK  + T PVL +PD    FV
Subjt:  SPACESSFQELKQKLVTAPVLTVPDGSGSFV

Sequences

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CDS sequence

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ATGGCCCCAGCCGAGTTAAAGGAGTTGAAAGTCCAGTTACAGGAGCTGTTGGACAAGGGCTTTATCCGGCCCAGTGTATCACCTTGGGGAGCCCCAGTGTTGTTCGTAAA
GAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACCGAGAATTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTACCCAGAATCGAGGACCTGTTCGACCAGTTAC
AGGGGGCCACCGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGATATTCCCAAGACGGCCTTTCGTTCGAGGGTGTTTAAGGAC
TTTCTAGACCAATTCGTCATAGTCTTCATTGACGATATCTTGATCTATTCCAAGACTGAGGCCGAACACGAAGAGCACTTGCACCAAGTCTTGGAGACCCTTCGAGCTCA
TAAGCTATACGCCAAGTTCTCCAAGTGTGAGTTCTGGTTAAAGAAGGTGACATTTTTAGGGCACGTGGTTTCCAGTGAGGGAGTCTCGGTGGACCCAGCTAAGGTCGAAG
CGGTGACCAACTGGCCTCGACCGTCTACAGTCAGTGAGATTCGCAGTTTTCTGGGTCTGGCAGGATACTACAGGAGGTTTGTAGAAGACTTCTCACGCATAGCCAGCCCA
TTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGTGAGAGTAGTTTCCAAGAGCTTAAGCAGAAGCTAGTGACGGCACCAGTCCTGACAGTGCC
TGATGGGTCGGGAAGTTTTGTGATCTATAGTGATGCCTCTAAGAATGGACTGGGAGGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCGTATGCCTCACGCCAGTTGAAGA
ATCATGAGCGGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGAC
CACAAGAGCCTGAAGTATTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAGGACTACGACTGCGAGATCCTGTACCATCCAGGTAA
AGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACGAAGCAGACCCCCTTACTCAGGGATTTGGAGAGAGCCGAGATTGCAGTCT
CAGTAGGTGAGGTTGCCGCACAGTTGGCTCAGTTGACAGTTCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAGTGATCCTTACTTGGCAGAGAAACGTCGT
ATGGTAGAGACGGAGCAAGGTGAAGAGTTCTCTATATCCTCTGATGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACAGAGCTTTT
GACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTAGCAGAGT
TCGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATG
GACTTTATCACGGGACTGCCCAAGACCTTGAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGACAGCCCACTTCGTGCCAGGGAAATCCACGTACAC
TGCCAGCAAGTGGGGGCAGTTATACATGACGGAAATAGTAAGACTGCACGGAGTACCAGTATCCATCGTGTCAGACAGGGATGCCCGTTTCACTTCGAAATTTTGGCAAG
GGCTCCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGACTGAACCAGATTTTGGAGGATATGCTGCGGGCC
TGTGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCACCTGCATCTAATGGAGTTCGCCTATAATAACAGTTACCAGGCCACCATTGGTATGGCTCCGTTTGAGGCTCTGTA
TGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAATGCAGCCATACAGAAGATCCGAGCTC
GTATGCTGACCGCACAGAGCAGACAGAAGAGTTACGCGGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTTTGAAGGTAGCACCGATGAAGGGC
GTTCTGAGGTTCGAGAAGAAGGGGAAGTTGAGTCCACGTTTCGTGGGGCCATTTGAGATACTGGAACGGGTTGGCCCTGTGGCTTATCGTTTGGCCTTGCCCCCATCCCT
CTCAGCAGTGCATGACGTATTCCATGTCTCCATGTTGAGGAGGTCAGTGAGAACTTGA

mRNA sequence

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Protein sequence

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MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRVFKD
FLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP
LTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKNGLGGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTD
HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRR
MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSM
DFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRA
CVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKG
VLRFEKKGKLSPRFVGPFEILERVGPVAYRLALPPSLSAVHDVFHVSMLRRSVRT

Cmc05g0136151 (gene) of Melon (Charmono) v1.1 genome