; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc05g0136621 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0136621
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr05:19887331..19889212
RNA-Seq ExpressionCmc05g0136621
SyntenyCmc05g0136621
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047643.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]0.0e+00100Show/hide
Query:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
        MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
Subjt:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL

Query:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
        GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
Subjt:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET

Query:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
        DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Subjt:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL

Query:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR
        ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR
Subjt:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR

Query:  TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAES
        TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAES
Subjt:  TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAES

Query:  FVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
        FVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
Subjt:  FVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY

TYK02030.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]0.0e+0096.41Show/hide
Query:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
        MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
Subjt:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL

Query:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
        GHIISGEGVE+DSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKK GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
Subjt:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET

Query:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
        D SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYE ELMAVVLSVQRWRPYLLGAKFVVK DQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEV YKPGL
Subjt:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL

Query:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFL
        ENKA DALSRRPPDIQLNSISIPYWMD ETIKEEVE DEKLKKI ASLN+ DE QT+KFTIKNSLLHYKNRLVISKASSLIPAI+NTFHDSVV GHSGFL
Subjt:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFL

Query:  RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAE
        RTYKRLASELYWEGMKSDVKKHCEACVTCQRN SLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFL LKHPYTAKTVAE
Subjt:  RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAE

Query:  SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
        SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI+WLPWAEY
Subjt:  SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY

TYK02195.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]0.0e+0097.44Show/hide
Query:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
        MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
Subjt:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL

Query:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
        GHIISGEGVE+DSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKK GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
Subjt:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET

Query:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
        D SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVK DQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Subjt:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL

Query:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFL
        ENKA DALSRRPPDIQLNSISIPYWMDLETIKEEVE DEKLKKI ASLN+EDE QT+KFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVV GHSGFL
Subjt:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFL

Query:  RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAE
        RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFL LKHPYTAKTVAE
Subjt:  RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAE

Query:  SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
        SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI+WLPWAEY
Subjt:  SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY

TYK08301.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]0.0e+0099.66Show/hide
Query:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
        MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
Subjt:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL

Query:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
        GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
Subjt:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET

Query:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
        DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Subjt:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL

Query:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR
        ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQT+KFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVV GHSGFLR
Subjt:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR

Query:  TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAES
        TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAES
Subjt:  TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAES

Query:  FVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
        FVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
Subjt:  FVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY

TYK23779.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]0.0e+0096.92Show/hide
Query:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
        MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAP TFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
Subjt:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL

Query:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
        GHIISGEGVE+DSEKIK VADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKK GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
Subjt:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET

Query:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
        D SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVK DQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Subjt:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL

Query:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFL
        ENKA DALSRRPPDIQLNSISIPYWMDLETIKEEVE DEKLKKI ASLN+EDE QT+KFTIKNSLLHYKNRLVISKASSLIPAI+NTFHDSVVGGHSGFL
Subjt:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFL

Query:  RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAE
        RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSP GLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFL LKHPYTAKTVAE
Subjt:  RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAE

Query:  SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
        SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI+WLPWAEY
Subjt:  SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY

TrEMBL top hitse value%identityAlignment
A0A5A7TVR3 Putative retroelement pol polyprotein0.0e+00100Show/hide
Query:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
        MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
Subjt:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL

Query:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
        GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
Subjt:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET

Query:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
        DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Subjt:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL

Query:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR
        ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR
Subjt:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR

Query:  TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAES
        TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAES
Subjt:  TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAES

Query:  FVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
        FVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
Subjt:  FVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY

A0A5D3BSD7 Putative retroelement pol polyprotein0.0e+0096.41Show/hide
Query:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
        MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
Subjt:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL

Query:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
        GHIISGEGVE+DSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKK GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
Subjt:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET

Query:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
        D SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYE ELMAVVLSVQRWRPYLLGAKFVVK DQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEV YKPGL
Subjt:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL

Query:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFL
        ENKA DALSRRPPDIQLNSISIPYWMD ETIKEEVE DEKLKKI ASLN+ DE QT+KFTIKNSLLHYKNRLVISKASSLIPAI+NTFHDSVV GHSGFL
Subjt:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFL

Query:  RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAE
        RTYKRLASELYWEGMKSDVKKHCEACVTCQRN SLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFL LKHPYTAKTVAE
Subjt:  RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAE

Query:  SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
        SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI+WLPWAEY
Subjt:  SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY

A0A5D3BSP2 Ty3/gypsy retrotransposon protein0.0e+0097.44Show/hide
Query:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
        MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
Subjt:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL

Query:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
        GHIISGEGVE+DSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKK GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
Subjt:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET

Query:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
        D SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVK DQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Subjt:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL

Query:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFL
        ENKA DALSRRPPDIQLNSISIPYWMDLETIKEEVE DEKLKKI ASLN+EDE QT+KFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVV GHSGFL
Subjt:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFL

Query:  RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAE
        RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFL LKHPYTAKTVAE
Subjt:  RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAE

Query:  SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
        SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI+WLPWAEY
Subjt:  SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY

A0A5D3C8Y2 Putative retroelement pol polyprotein0.0e+0099.66Show/hide
Query:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
        MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
Subjt:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL

Query:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
        GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
Subjt:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET

Query:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
        DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Subjt:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL

Query:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR
        ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQT+KFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVV GHSGFLR
Subjt:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR

Query:  TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAES
        TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAES
Subjt:  TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAES

Query:  FVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
        FVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
Subjt:  FVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY

A0A5D3DKH5 Ty3/gypsy retrotransposon protein0.0e+0096.92Show/hide
Query:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
        MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAP TFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL
Subjt:  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYL

Query:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
        GHIISGEGVE+DSEKIK VADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKK GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET
Subjt:  GHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIET

Query:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
        D SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVK DQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Subjt:  DVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL

Query:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFL
        ENKA DALSRRPPDIQLNSISIPYWMDLETIKEEVE DEKLKKI ASLN+EDE QT+KFTIKNSLLHYKNRLVISKASSLIPAI+NTFHDSVVGGHSGFL
Subjt:  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFL

Query:  RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAE
        RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSP GLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFL LKHPYTAKTVAE
Subjt:  RTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAE

Query:  SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
        SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI+WLPWAEY
Subjt:  SFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.3e-8932.21Show/hide
Query:  DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHII
        D  K AFR   G +E+LVMP+G++ APA FQ  +N+I        V+ + DDILI+SK+E +H++H++ V   L+  +L  N+ KC F Q +V+++G+ I
Subjt:  DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHII

Query:  SGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDVS
        S +G     E I  V  W  P N +E+R FLG   Y R+F+     +  PL  LLKK+  +KW     ++   +K  ++S P L   +F+    +ETD S
Subjt:  SGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDVS

Query:  GFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV
           VGAVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F +  D ++L  +   E      +  +W   L  ++FE+
Subjt:  GFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV

Query:  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLI
         Y+PG  N   DALSR        P D + NSI+    + +      + + E   D KL  +   LN ED+       +K+ LL + K+++++   + L 
Subjt:  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLI

Query:  PAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS
          I+  +H+     H G       +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SMDFI  LP++ G++ + VVVDR S
Subjt:  PAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS

Query:  KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI
        K +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQTDGQTE  N+ +E  LRC CS  P  W+
Subjt:  KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI

P0CT35 Transposon Tf2-2 polyprotein1.3e-8932.21Show/hide
Query:  DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHII
        D  K AFR   G +E+LVMP+G++ APA FQ  +N+I        V+ + DDILI+SK+E +H++H++ V   L+  +L  N+ KC F Q +V+++G+ I
Subjt:  DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHII

Query:  SGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDVS
        S +G     E I  V  W  P N +E+R FLG   Y R+F+     +  PL  LLKK+  +KW     ++   +K  ++S P L   +F+    +ETD S
Subjt:  SGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDVS

Query:  GFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV
           VGAVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F +  D ++L  +   E      +  +W   L  ++FE+
Subjt:  GFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV

Query:  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLI
         Y+PG  N   DALSR        P D + NSI+    + +      + + E   D KL  +   LN ED+       +K+ LL + K+++++   + L 
Subjt:  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLI

Query:  PAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS
          I+  +H+     H G       +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SMDFI  LP++ G++ + VVVDR S
Subjt:  PAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS

Query:  KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI
        K +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQTDGQTE  N+ +E  LRC CS  P  W+
Subjt:  KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI

P0CT36 Transposon Tf2-3 polyprotein1.3e-8932.21Show/hide
Query:  DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHII
        D  K AFR   G +E+LVMP+G++ APA FQ  +N+I        V+ + DDILI+SK+E +H++H++ V   L+  +L  N+ KC F Q +V+++G+ I
Subjt:  DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHII

Query:  SGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDVS
        S +G     E I  V  W  P N +E+R FLG   Y R+F+     +  PL  LLKK+  +KW     ++   +K  ++S P L   +F+    +ETD S
Subjt:  SGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDVS

Query:  GFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV
           VGAVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F +  D ++L  +   E      +  +W   L  ++FE+
Subjt:  GFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV

Query:  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLI
         Y+PG  N   DALSR        P D + NSI+    + +      + + E   D KL  +   LN ED+       +K+ LL + K+++++   + L 
Subjt:  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLI

Query:  PAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS
          I+  +H+     H G       +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SMDFI  LP++ G++ + VVVDR S
Subjt:  PAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS

Query:  KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI
        K +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQTDGQTE  N+ +E  LRC CS  P  W+
Subjt:  KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI

P0CT37 Transposon Tf2-4 polyprotein1.3e-8932.21Show/hide
Query:  DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHII
        D  K AFR   G +E+LVMP+G++ APA FQ  +N+I        V+ + DDILI+SK+E +H++H++ V   L+  +L  N+ KC F Q +V+++G+ I
Subjt:  DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHII

Query:  SGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDVS
        S +G     E I  V  W  P N +E+R FLG   Y R+F+     +  PL  LLKK+  +KW     ++   +K  ++S P L   +F+    +ETD S
Subjt:  SGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDVS

Query:  GFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV
           VGAVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F +  D ++L  +   E      +  +W   L  ++FE+
Subjt:  GFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV

Query:  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLI
         Y+PG  N   DALSR        P D + NSI+    + +      + + E   D KL  +   LN ED+       +K+ LL + K+++++   + L 
Subjt:  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLI

Query:  PAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS
          I+  +H+     H G       +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SMDFI  LP++ G++ + VVVDR S
Subjt:  PAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS

Query:  KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI
        K +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQTDGQTE  N+ +E  LRC CS  P  W+
Subjt:  KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI

P0CT41 Transposon Tf2-12 polyprotein1.3e-8932.21Show/hide
Query:  DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHII
        D  K AFR   G +E+LVMP+G++ APA FQ  +N+I        V+ + DDILI+SK+E +H++H++ V   L+  +L  N+ KC F Q +V+++G+ I
Subjt:  DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHII

Query:  SGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDVS
        S +G     E I  V  W  P N +E+R FLG   Y R+F+     +  PL  LLKK+  +KW     ++   +K  ++S P L   +F+    +ETD S
Subjt:  SGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDVS

Query:  GFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV
           VGAVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F +  D ++L  +   E      +  +W   L  ++FE+
Subjt:  GFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV

Query:  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLI
         Y+PG  N   DALSR        P D + NSI+    + +      + + E   D KL  +   LN ED+       +K+ LL + K+++++   + L 
Subjt:  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLI

Query:  PAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS
          I+  +H+     H G       +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SMDFI  LP++ G++ + VVVDR S
Subjt:  PAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS

Query:  KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI
        K +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQTDGQTE  N+ +E  LRC CS  P  W+
Subjt:  KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein3.0e-3654.2Show/hide
Query:  IEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLG--HIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFK
        + H+  V     +H  +AN+KKC FGQ ++ YLG  HIISGEGV  D  K++A+  WP P N  E+RGFLGLTGYYRRFV++YG I  PLT+LLKK   K
Subjt:  IEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLG--HIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFK

Query:  WNEDAEESFRKLKSAMMSLPTLALPNFTLPF
        W E A  +F+ LK A+ +LP LALP+  LPF
Subjt:  WNEDAEESFRKLKSAMMSLPTLALPNFTLPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGATAAAGATATCCCGAAGACGGCTTTTCGCACTCACGAAGGCCACTACGAATTCCTTGTCATGCCGTTTGGACTAACCAACGCCCCGGCCACTTTCCAAGCCCT
AATGAATAGCATCTTTAGACCATTTTTGAGAAAGTTCGTACTGGTCTTCTTTGATGACATCCTGATCTACAGCAAGAATGAAAAAGACCACATAGAGCATATTGAAAAGG
TCTTTCTTGCACTGAGAAAGCATAGCCTCTTCGCCAATAAAAAGAAGTGCAACTTTGGCCAGAAGAAGGTAGAATACTTGGGACACATCATATCAGGAGAAGGAGTGGAA
ATAGACTCGGAGAAAATAAAAGCTGTGGCAGATTGGCCATGCCCAACAAATATAAGAGAAGTTCGGGGATTCCTTGGATTAACAGGATACTACAGGAGATTTGTCCAACA
TTATGGATCAATAGCAGCCCCATTAACCCAACTACTCAAAAAAGAGGGATTCAAATGGAACGAAGATGCGGAAGAATCGTTTCGAAAGCTAAAGTCTGCAATGATGTCTC
TACCAACGTTAGCCTTACCCAACTTTACACTCCCATTTGAAATAGAGACAGATGTGTCAGGTTTTGGAGTGGGAGCAGTACTAATCCAGGCAAAGAGACCCATTGCCTTC
TACAGCCACACACTATCCATGAGAGATAGAGCTCGGCCAGTATATGAACGAGAGTTGATGGCGGTTGTCCTATCCGTACAAAGATGGAGGCCATACTTGCTTGGGGCAAA
ATTCGTAGTAAAACCGGATCAAAAATCACTGAAATTTTTGCTAGAACAACGGGTCATCCAGCCACAATATCAAAAATGGTTATCTAAACTATTGGGGTACTCATTTGAAG
TGGTGTACAAACCTGGCTTAGAAAATAAAGCAGTCGATGCCTTATCAAGAAGACCACCGGACATACAATTAAACAGTATTTCAATACCATATTGGATGGACTTGGAAACC
ATAAAGGAAGAAGTAGAAGATGAAAAGCTAAAGAAAATAGCAGCAAGCTTAAACAAAGAGGACGAAGGCCAAACCAACAAATTCACAATAAAGAATAGCCTCCTGCATTA
CAAGAATAGACTGGTAATCTCAAAAGCGTCCTCCCTAATCCCAGCCATACTAAATACATTTCATGACTCAGTAGTAGGAGGACACTCCGGATTCTTAAGAACTTATAAAA
GACTAGCAAGCGAGCTATATTGGGAAGGGATGAAATCAGATGTTAAAAAACATTGTGAAGCTTGCGTAACGTGCCAACGCAACAAAAGCTTAGCTCTATCGCCAGCCGGA
CTATTAGTACCACTTGACATACCGCATCAAATTTGGAGCGATATCTCCATGGACTTCATTGATGGTTTACCTAAAGCAAAAGGATGGGACGTAATACTTGTGGTAGTAGA
TCGACTCAGCAAATACAGCCACTTCTTGACCCTTAAACACCCTTACACAGCTAAGACAGTAGCAGAAAGCTTTGTAAAAGAAATAGTACGACTGCACGGCTTCCCTACCT
CCATTGTCTCCGATCGAGACAAAGTTTTTCTCAGCCACTTTTGGAATGAATTGTTCAAAATGGCGGGCACTAAACTCAAGAAAAGCACAGCTTACCACCCACAGACCGAC
GGACAAACAGAGGTAGTCAACAGAGGACTAGAAACCTATCTCAGATGCTTTTGTAGTGAACGCCCAAAGGAATGGATCATGTGGCTACCTTGGGCCGAGTACTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGATAAAGATATCCCGAAGACGGCTTTTCGCACTCACGAAGGCCACTACGAATTCCTTGTCATGCCGTTTGGACTAACCAACGCCCCGGCCACTTTCCAAGCCCT
AATGAATAGCATCTTTAGACCATTTTTGAGAAAGTTCGTACTGGTCTTCTTTGATGACATCCTGATCTACAGCAAGAATGAAAAAGACCACATAGAGCATATTGAAAAGG
TCTTTCTTGCACTGAGAAAGCATAGCCTCTTCGCCAATAAAAAGAAGTGCAACTTTGGCCAGAAGAAGGTAGAATACTTGGGACACATCATATCAGGAGAAGGAGTGGAA
ATAGACTCGGAGAAAATAAAAGCTGTGGCAGATTGGCCATGCCCAACAAATATAAGAGAAGTTCGGGGATTCCTTGGATTAACAGGATACTACAGGAGATTTGTCCAACA
TTATGGATCAATAGCAGCCCCATTAACCCAACTACTCAAAAAAGAGGGATTCAAATGGAACGAAGATGCGGAAGAATCGTTTCGAAAGCTAAAGTCTGCAATGATGTCTC
TACCAACGTTAGCCTTACCCAACTTTACACTCCCATTTGAAATAGAGACAGATGTGTCAGGTTTTGGAGTGGGAGCAGTACTAATCCAGGCAAAGAGACCCATTGCCTTC
TACAGCCACACACTATCCATGAGAGATAGAGCTCGGCCAGTATATGAACGAGAGTTGATGGCGGTTGTCCTATCCGTACAAAGATGGAGGCCATACTTGCTTGGGGCAAA
ATTCGTAGTAAAACCGGATCAAAAATCACTGAAATTTTTGCTAGAACAACGGGTCATCCAGCCACAATATCAAAAATGGTTATCTAAACTATTGGGGTACTCATTTGAAG
TGGTGTACAAACCTGGCTTAGAAAATAAAGCAGTCGATGCCTTATCAAGAAGACCACCGGACATACAATTAAACAGTATTTCAATACCATATTGGATGGACTTGGAAACC
ATAAAGGAAGAAGTAGAAGATGAAAAGCTAAAGAAAATAGCAGCAAGCTTAAACAAAGAGGACGAAGGCCAAACCAACAAATTCACAATAAAGAATAGCCTCCTGCATTA
CAAGAATAGACTGGTAATCTCAAAAGCGTCCTCCCTAATCCCAGCCATACTAAATACATTTCATGACTCAGTAGTAGGAGGACACTCCGGATTCTTAAGAACTTATAAAA
GACTAGCAAGCGAGCTATATTGGGAAGGGATGAAATCAGATGTTAAAAAACATTGTGAAGCTTGCGTAACGTGCCAACGCAACAAAAGCTTAGCTCTATCGCCAGCCGGA
CTATTAGTACCACTTGACATACCGCATCAAATTTGGAGCGATATCTCCATGGACTTCATTGATGGTTTACCTAAAGCAAAAGGATGGGACGTAATACTTGTGGTAGTAGA
TCGACTCAGCAAATACAGCCACTTCTTGACCCTTAAACACCCTTACACAGCTAAGACAGTAGCAGAAAGCTTTGTAAAAGAAATAGTACGACTGCACGGCTTCCCTACCT
CCATTGTCTCCGATCGAGACAAAGTTTTTCTCAGCCACTTTTGGAATGAATTGTTCAAAATGGCGGGCACTAAACTCAAGAAAAGCACAGCTTACCACCCACAGACCGAC
GGACAAACAGAGGTAGTCAACAGAGGACTAGAAACCTATCTCAGATGCTTTTGTAGTGAACGCCCAAAGGAATGGATCATGTGGCTACCTTGGGCCGAGTACTGTTGA
Protein sequenceShow/hide protein sequence
MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVE
IDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAF
YSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAVDALSRRPPDIQLNSISIPYWMDLET
IKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAG
LLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTD
GQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEYC