| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036644.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.1e-83 | 94.44 | Show/hide |
Query: MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNP
MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDS DVSPVRTPFDASKHLK+NKGDSVSQPEYAKIIGSVMYLMNYTRP+IAYAVSRLSRYTHNP
Subjt: MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNP
Query: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAI
+RYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDNDEVNS SGY+FLL G AI
Subjt: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAI
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| KAA0047579.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.9e-86 | 98.75 | Show/hide |
Query: LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRY
L EADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKII SVMYLMNYTRPNIAYAVSRLSRYTHNPDRY
Subjt: LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRY
Query: HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAIF
HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAIF
Subjt: HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAIF
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| KAA0049695.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.1e-91 | 93.26 | Show/hide |
Query: MELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRP
MEL+TDTKFFL SHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFD DVSPVRTPFDASKHL +NKGDSVSQPEYAKIIGSVMYLMNYTRP
Subjt: MELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRP
Query: NIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAI
+IAYAVSRLSRYTHNPDRYHWD LRHLLRYLKGTIDYCL+FNKFPAVLEGYCDANWVTDNDEVNS SGY+FLL GGAI
Subjt: NIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAI
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| TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.4e-106 | 95 | Show/hide |
Query: MVGADCILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDS
MVGADCILICLYVDDMLIFGTNMELITDTK+FL SHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDS DVSPVRTPFDASKHLK+NKGDS
Subjt: MVGADCILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDS
Query: VSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAI
VSQPEYAKIIGSVMYLMNYTRP+IAYAVSRLSRYTHNP+RYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDNDEVNS SGY+FLL GGAI
Subjt: VSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAI
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| TYK08238.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.9e-86 | 98.75 | Show/hide |
Query: LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRY
L EADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKII SVMYLMNYTRPNIAYAVSRLSRYTHNPDRY
Subjt: LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRY
Query: HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAIF
HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAIF
Subjt: HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAIF
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7SZD1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.1e-84 | 94.44 | Show/hide |
Query: MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNP
MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDS DVSPVRTPFDASKHLK+NKGDSVSQPEYAKIIGSVMYLMNYTRP+IAYAVSRLSRYTHNP
Subjt: MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNP
Query: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAI
+RYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDNDEVNS SGY+FLL G AI
Subjt: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAI
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| A0A5A7U281 Ty1-copia retrotransposon protein | 1.9e-86 | 98.75 | Show/hide |
Query: LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRY
L EADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKII SVMYLMNYTRPNIAYAVSRLSRYTHNPDRY
Subjt: LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRY
Query: HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAIF
HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAIF
Subjt: HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAIF
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| A0A5A7U7W6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.1e-92 | 93.26 | Show/hide |
Query: MELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRP
MEL+TDTKFFL SHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFD DVSPVRTPFDASKHL +NKGDSVSQPEYAKIIGSVMYLMNYTRP
Subjt: MELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRP
Query: NIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAI
+IAYAVSRLSRYTHNPDRYHWD LRHLLRYLKGTIDYCL+FNKFPAVLEGYCDANWVTDNDEVNS SGY+FLL GGAI
Subjt: NIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAI
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| A0A5D3C5T2 Ty1-copia retrotransposon protein | 1.6e-106 | 95 | Show/hide |
Query: MVGADCILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDS
MVGADCILICLYVDDMLIFGTNMELITDTK+FL SHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDS DVSPVRTPFDASKHLK+NKGDS
Subjt: MVGADCILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDS
Query: VSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAI
VSQPEYAKIIGSVMYLMNYTRP+IAYAVSRLSRYTHNP+RYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDNDEVNS SGY+FLL GGAI
Subjt: VSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAI
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| A0A5D3CAN6 Ty1-copia retrotransposon protein | 1.9e-86 | 98.75 | Show/hide |
Query: LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRY
L EADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKII SVMYLMNYTRPNIAYAVSRLSRYTHNPDRY
Subjt: LGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRY
Query: HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAIF
HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAIF
Subjt: HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFLLEGGAIF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.0e-25 | 35.79 | Show/hide |
Query: ILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEY
I + LYVDD++I +M + + K +L F M DL E +G++I + + L QS YV+KIL KF+ + + V TP + + + D
Subjt: ILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEY
Query: AKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNK---FPAVLEGYCDANWVTDNDEVNSISGYIF
+IG +MY+M TRP++ AV+ LSRY+ + W L+ +LRYLKGTID L F K F + GY D++W + S +GY+F
Subjt: AKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNK---FPAVLEGYCDANWVTDNDEVNSISGYIF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.5e-37 | 43.2 | Show/hide |
Query: ILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTS--LSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLK----------
I++ LYVDDMLI G + LI K L F+MKDLG A ILG+KI + +TS L L Q Y+E++L++F+ + PV TP + HLK
Subjt: ILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTS--LSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLK----------
Query: QNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFL
+ KG+ P Y+ +GS+MY M TRP+IA+AV +SR+ NP + HW+A++ +LRYL+GT CL F +L+GY DA+ D D S +GY+F
Subjt: QNKGDSVSQPEYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSISGYIFL
Query: LEGGAI
GGAI
Subjt: LEGGAI
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 4.8e-23 | 32.45 | Show/hide |
Query: ICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAK
+ LYVDD+L+ G++ L+ F L S F MKDLG LG++I+ + + L L Q+ Y E+IL +D P+ TP + + ++
Subjt: ICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAK
Query: IIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSISGYIFLL
I+G++ YL TRP+I+YAV+ + + H P +D L+ +LRY+KGTI + L+ +K + ++ +CD++W S +G+ L
Subjt: IIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSISGYIFLL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.0e-28 | 36.92 | Show/hide |
Query: GADCILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVS
G + + +YVDD+LI G + L+ +T L F +KD E LG++ ++ T L L Q Y+ +L + + + PV TP S L G ++
Subjt: GADCILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVS
Query: QP-EYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSISGYIFLL
P EY I+GS+ YL +TRP+I+YAV+RLS++ H P H AL+ +LRYL GT ++ + K + L Y DA+W D D+ S +GYI L
Subjt: QP-EYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSISGYIFLL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.8e-28 | 36.92 | Show/hide |
Query: GADCILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVS
G I + +YVDD+LI G + L+ T L F +K+ + LG++ ++ L L Q Y +L + + + PV TP S L + G +
Subjt: GADCILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVS
Query: QP-EYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSISGYIFLL
P EY I+GS+ YL +TRP+++YAV+RLS+Y H P HW+AL+ +LRYL GT D+ + K + L Y DA+W D D+ S +GYI L
Subjt: QP-EYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSISGYIFLL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.4e-20 | 30.73 | Show/hide |
Query: CILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNK-GDSVSQP
C+L+ YVDD++I N + + K L S F+++DLG LG++I ++ +++CQ Y +L + + P P D S + GD V
Subjt: CILICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNK-GDSVSQP
Query: EYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSISGYIFLL
Y ++IG +MYL TR +I++AV++LS+++ P H A+ +L Y+KGT+ L ++ + L+ + DA++ + D S +GY L
Subjt: EYAKIIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSISGYIFLL
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 2.7e-05 | 30.12 | Show/hide |
Query: MYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSISGYIFLL
MYL TRP++ +AV+RLS+++ A+ +L Y+KGT+ L ++ + L+ + D++W + D S++G+ L+
Subjt: MYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSISGYIFLL
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 3.4e-24 | 32.45 | Show/hide |
Query: ICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAK
+ LYVDD+L+ G++ L+ F L S F MKDLG LG++I+ + + L L Q+ Y E+IL +D P+ TP + + ++
Subjt: ICLYVDDMLIFGTNMELITDTKFFLFSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSVDVSPVRTPFDASKHLKQNKGDSVSQPEYAK
Query: IIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSISGYIFLL
I+G++ YL TRP+I+YAV+ + + H P +D L+ +LRY+KGTI + L+ +K + ++ +CD++W S +G+ L
Subjt: IIGSVMYLMNYTRPNIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNSISGYIFLL
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