| GenBank top hits | e value | %identity | Alignment |
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| ADN33807.1 ty1-copia retrotransposon protein [Cucumis melo subsp. melo] | 4.4e-110 | 90.27 | Show/hide |
Query: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
M NS TAGVI KGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNR GLKIVLEGDKVVLTKNG+FVGKGYLSNGLFVLNTISMNANASSS Y+IESA
Subjt: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
Query: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
NLWHGRLGHVNFASIR+LKD+RLINTSE+HETGKCP+C+ESKFHKKPFKP+EYRTT+LLELIYSDLADFRTT SRGGKNYYVSFVDDYSRFTKIYLIKTK
Subjt: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
Query: NEASSMFLKFKAESENHLGKKIKKIK
NEA SMF+KFKAESEN LGK+IK+++
Subjt: NEASSMFLKFKAESENHLGKKIKKIK
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| KAA0044881.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 5.2e-111 | 92.04 | Show/hide |
Query: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
M NS TAGVIRKGKVILKLTSGKTLSL+NVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSS Y+IESA
Subjt: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
Query: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
NLWHGRLGHVNFASIR+LKDLRLINTSESHE+GKCPICVESKFHKK FKP+EYRTT+LLELI+SDLADFRTTTS+GGKNYYVSFVDDYSRFTKIYLIKTK
Subjt: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
Query: NEASSMFLKFKAESENHLGKKIKKIK
NEA SMFLKFKAESEN LGK+IK+++
Subjt: NEASSMFLKFKAESENHLGKKIKKIK
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| KAA0066784.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.4e-110 | 90.27 | Show/hide |
Query: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
M NS TAGVI KGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNR GLKIVLEGDKVVLTKNG+FVGKGYLSNGLFVLNTISMNANASSS Y+IESA
Subjt: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
Query: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
NLWHGRLGHVNFASIR+LKD+RLINTSE+HETGKCP+C+ESKFHKKPFKP+EYRTT+LLELIYSDLADFRTT SRGGKNYYVSFVDDYSRFTKIYLIKTK
Subjt: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
Query: NEASSMFLKFKAESENHLGKKIKKIK
NEA SMF+KFKAESEN LGK+IK+++
Subjt: NEASSMFLKFKAESENHLGKKIKKIK
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| TYK04394.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 7.4e-110 | 90.27 | Show/hide |
Query: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
M NS TAGVI KGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNR GLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSS Y+IESA
Subjt: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
Query: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
NLWHGRLGHVNFASIR+LKD+RLINTSE+HETGKCPIC+ESKFHKKPFKP+EYRTT+LLELI+SDLADFRTT SRGGKNYYVSFVDDYSRFTKIYLI+TK
Subjt: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
Query: NEASSMFLKFKAESENHLGKKIKKIK
NEA SMF+KFKAESEN LGK+IK+++
Subjt: NEASSMFLKFKAESENHLGKKIKKIK
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| TYK12114.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 9.7e-110 | 90.71 | Show/hide |
Query: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
M NS TAGVI KGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSS Y+IESA
Subjt: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
Query: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
NLWHGRLGHVNFASIR+LKD+RLINTSE+HETGKC IC+ESKFHKKPFKP+EYRTT+LLELI+SDLADFRTT SRGGKNYYVSFVDDYSRFTKIYLIKTK
Subjt: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
Query: NEASSMFLKFKAESENHLGKKIKKIK
NEA SMF+KFKAESEN LGK+IK+++
Subjt: NEASSMFLKFKAESENHLGKKIKKIK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTN4 Ty1-copia retrotransposon protein | 2.5e-111 | 92.04 | Show/hide |
Query: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
M NS TAGVIRKGKVILKLTSGKTLSL+NVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSS Y+IESA
Subjt: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
Query: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
NLWHGRLGHVNFASIR+LKDLRLINTSESHE+GKCPICVESKFHKK FKP+EYRTT+LLELI+SDLADFRTTTS+GGKNYYVSFVDDYSRFTKIYLIKTK
Subjt: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
Query: NEASSMFLKFKAESENHLGKKIKKIK
NEA SMFLKFKAESEN LGK+IK+++
Subjt: NEASSMFLKFKAESENHLGKKIKKIK
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| A0A5A7VHG8 Ty1-copia retrotransposon protein | 2.1e-110 | 90.27 | Show/hide |
Query: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
M NS TAGVI KGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNR GLKIVLEGDKVVLTKNG+FVGKGYLSNGLFVLNTISMNANASSS Y+IESA
Subjt: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
Query: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
NLWHGRLGHVNFASIR+LKD+RLINTSE+HETGKCP+C+ESKFHKKPFKP+EYRTT+LLELIYSDLADFRTT SRGGKNYYVSFVDDYSRFTKIYLIKTK
Subjt: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
Query: NEASSMFLKFKAESENHLGKKIKKIK
NEA SMF+KFKAESEN LGK+IK+++
Subjt: NEASSMFLKFKAESENHLGKKIKKIK
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| A0A5D3BZI1 Ty1-copia retrotransposon protein | 3.6e-110 | 90.27 | Show/hide |
Query: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
M NS TAGVI KGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNR GLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSS Y+IESA
Subjt: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
Query: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
NLWHGRLGHVNFASIR+LKD+RLINTSE+HETGKCPIC+ESKFHKKPFKP+EYRTT+LLELI+SDLADFRTT SRGGKNYYVSFVDDYSRFTKIYLI+TK
Subjt: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
Query: NEASSMFLKFKAESENHLGKKIKKIK
NEA SMF+KFKAESEN LGK+IK+++
Subjt: NEASSMFLKFKAESENHLGKKIKKIK
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| A0A5D3CLR6 Ty1-copia retrotransposon protein | 4.7e-110 | 90.71 | Show/hide |
Query: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
M NS TAGVI KGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSS Y+IESA
Subjt: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
Query: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
NLWHGRLGHVNFASIR+LKD+RLINTSE+HETGKC IC+ESKFHKKPFKP+EYRTT+LLELI+SDLADFRTT SRGGKNYYVSFVDDYSRFTKIYLIKTK
Subjt: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
Query: NEASSMFLKFKAESENHLGKKIKKIK
NEA SMF+KFKAESEN LGK+IK+++
Subjt: NEASSMFLKFKAESENHLGKKIKKIK
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| E5GBG5 Ty1-copia retrotransposon protein | 2.1e-110 | 90.27 | Show/hide |
Query: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
M NS TAGVI KGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNR GLKIVLEGDKVVLTKNG+FVGKGYLSNGLFVLNTISMNANASSS Y+IESA
Subjt: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
Query: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
NLWHGRLGHVNFASIR+LKD+RLINTSE+HETGKCP+C+ESKFHKKPFKP+EYRTT+LLELIYSDLADFRTT SRGGKNYYVSFVDDYSRFTKIYLIKTK
Subjt: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
Query: NEASSMFLKFKAESENHLGKKIKKIK
NEA SMF+KFKAESEN LGK+IK+++
Subjt: NEASSMFLKFKAESENHLGKKIKKIK
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.6e-17 | 30.56 | Show/hide |
Query: ILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGY-LSNGLFVLNTISMNANASSSVYVIESANLWHGRLGHVNFAS
I++L + ++L +VL+ NL+S L G+ I + V ++KNG V K + N + V+N + + NA + LWH R GH++
Subjt: ILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGY-LSNGLFVLNTISMNANASSSVYVIESANLWHGRLGHVNFAS
Query: IRELK------DLRLINTSESHETGKCPICVESKFHKKPFKPIEYRT--TDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTKNEASSM
+ E+K D L+N E C C+ K + PFK ++ +T L +++SD+ T + KNY+V FVD ++ + YLIK K++ SM
Subjt: IRELK------DLRLINTSESHETGKCPICVESKFHKKPFKPIEYRT--TDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTKNEASSM
Query: FLKFKAESENHLGKKI
F F A+SE H K+
Subjt: FLKFKAESENHLGKKI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.1e-26 | 31.86 | Show/hide |
Query: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
M N+ + + G + +K G TL L +V +VP LR NL+SG L+R G + K LTK + KG L+ N +++ I S
Subjt: MENSVTAGVIRKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSVYVIESA
Query: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
+LWH R+GH++ ++ L LI+ ++ C C+ K H+ F+ R ++L+L+YSD+ S GG Y+V+F+DD SR +Y++KTK
Subjt: NLWHGRLGHVNFASIRELKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTK
Query: NEASSMFLKFKAESENHLGKKIKKIK
++ +F KF A E G+K+K+++
Subjt: NEASSMFLKFKAESENHLGKKIKKIK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-13 | 29.52 | Show/hide |
Query: TSGKTLSLSNVLYVPSLRRNLVSGSLL---NRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLF---VLNTISMNANASSSVYVIESANLWHGRLGHVNFA
T + L+L N+LYVP++ +NL+S L N V ++ +V G + +G + L+ + ++ ++ AS S S+ WH RLGH +
Subjt: TSGKTLSLSNVLYVPSLRRNLVSGSLL---NRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLF---VLNTISMNANASSSVYVIESANLWHGRLGHVNFA
Query: SIRE-LKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTKNEASSMFLKFKA
+ + + L + SH+ C C+ +K +K PF +T LE IYSD+ S YYV FVD ++R+T +Y +K K++ F+ FK
Subjt: SIRE-LKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTKNEASSMFLKFKA
Query: ESENHLGKKI
EN +I
Subjt: ESENHLGKKI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.5e-15 | 30.66 | Show/hide |
Query: TSGKTLSLSNVLYVPSLRRNLVSGSLL---NRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLF-----VLNTISMNANASSSVYVIESANLWHGRLGHVN
TS ++L L+ VLYVP++ +NL+S L NRV ++ +V G + +G + L+ +SM A+ S + + WH RLGH +
Subjt: TSGKTLSLSNVLYVPSLRRNLVSGSLL---NRVGLKIVLEGDKVVLTKNGDFVGKGYLSNGLF-----VLNTISMNANASSSVYVIESANLWHGRLGHVN
Query: FASIRE-LKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTKNEASSMFLKF
A + + + L + SH+ C C +K HK PF ++ LE IYSD+ S YYV FVD ++R+T +Y +K K++ F+ F
Subjt: FASIRE-LKDLRLINTSESHETGKCPICVESKFHKKPFKPIEYRTTDLLELIYSDLADFRTTTSRGGKNYYVSFVDDYSRFTKIYLIKTKNEASSMFLKF
Query: KAESENHLGKKI
K+ EN +I
Subjt: KAESENHLGKKI
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