; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc05g0137491 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0137491
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationCMiso1.1chr05:21014639..21015868
RNA-Seq ExpressionCmc05g0137491
SyntenyCmc05g0137491
Gene Ontology termsGO:0006096 - glycolytic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016832 - aldehyde-lyase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0047938 - glucose-6-phosphate 1-epimerase activity (molecular function)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036831.1 peroxidase 64 [Cucumis melo var. makuwa]2.4e-20784.63Show/hide
Query:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL
        MKAD+KKHCEECLT QRSKSLALSPAGLLVPL IPQ +W DISMDFVEGLPK  GFEVILVVVDRLSKY HFLPLKHP+TAK VAELFVKE+VRLHGFPL
Subjt:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL

Query:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY
        SIVSDRDKIFLS FW+E+FRLSGTKLN++TAYHPQSDGQTEVVNRGVETYL CFCNEKPK+W +WLPW EYWYNTTFQR+IGMTPFQ+VYGRQPPT++SY
Subjt:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY

Query:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDS
        GSTLSKNSTVEEMLQERD VL +L EHLRLAQEQMK+YADRKR  VEY VG+YVFLRIRPYRQ ++  +RNEKL+PRFFGPYKIVE++GPVAYRL+LP+S
Subjt:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDS

Query:  SKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSN-VRPL
        SKIHPVFH+SQLRK+VGQHE  QPTIQFV+ENY WKS PE AVEYR+TVAGQWEVLV W+GLPKHEA+WESYDEMQ+KYP FHLEDKVNLKGG   VRPL
Subjt:  SKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSN-VRPL

Query:  IKHVYSRRKK
        IKHVYSRRKK
Subjt:  IKHVYSRRKK

KAA0040118.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.5e-20683.37Show/hide
Query:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL
        MKAD+KKHCEECLT QRSKSL+LSPAGLLVPL IPQ++W DISMDFVEGLPK  GFEV+LVVVDRLSKY HFLPLKHP+TAK VAELFVKE+VRLHGFPL
Subjt:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL

Query:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY
        SIVSDRDKIFLS FW+E+FRLSGTKLN++TAYHPQSDGQTEVVNRGVETYL CFCNEKPK+W +WLPW EYWYNTTFQR+IGMTPFQ+VYGRQPPT++SY
Subjt:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY

Query:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDS
        GSTLSKNSTVEEMLQERD VL++L EHL LAQEQMK YAD+KR  VEY VG+YVFLRIRPYRQ ++  +RNEKL+PRFFGPYKIVE++GPVAYRL+LP+S
Subjt:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDS

Query:  SKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLI
        SKIHPVFH+SQLRK+VG HE  QPTIQFV+ENY WKS PEEAV+YR+TVAGQWEVLV W+GLPKHEA+WESYDEMQ+KYP FHLEDKVNLKG   VRPLI
Subjt:  SKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLI

Query:  KHVYSRRKK
        KHVYSRRKK
Subjt:  KHVYSRRKK

KAA0040882.1 transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]2.9e-23799.75Show/hide
Query:  ECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPLSIVSDRDKIF
        ECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPLSIVSDRDKIF
Subjt:  ECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPLSIVSDRDKIF

Query:  LSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSYGSTLSKNSTV
        LSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKP+EWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSYGSTLSKNSTV
Subjt:  LSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSYGSTLSKNSTV

Query:  EEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDSSKIHPVFHIS
        EEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDSSKIHPVFHIS
Subjt:  EEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDSSKIHPVFHIS

Query:  QLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLIKHVYSRRKK
        QLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLIKHVYSRRKK
Subjt:  QLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLIKHVYSRRKK

TYK03053.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]7.6e-21497.81Show/hide
Query:  MDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPLSIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVV
        MDFVEGLPKFGGFEVILVVVDRLSKY HFLPLKHPFTAKLVAELFVK+V RLHGFPLSIVSDRDKIFLSHFWTELFRLSGTKLNRN AYHPQSDGQTEVV
Subjt:  MDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPLSIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVV

Query:  NRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSYGSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKR
        NRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQ+AIGMTPFQIVYGRQPPTIMSYGSTLSKNST EEMLQERDAVLITLCEHLRLAQEQMKVYADRKR
Subjt:  NRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSYGSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKR

Query:  PNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDSSKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAV
        PNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRF GPYKIVEKVGP+AYRLELPDSSKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAV
Subjt:  PNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDSSKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAV

Query:  EYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLIKHVYSRRKK
        EYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLIKHVYSRRKK
Subjt:  EYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLIKHVYSRRKK

TYK20833.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.7e-20583.13Show/hide
Query:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL
        MKAD+KKHCEECLT QRSKSL+LSPAGLLVPL IPQ++W DISMDFVEGLPK  GFEV+LVVVDRLSKY HFLPLKHP+TAK VAELFVKE+VRLHGFPL
Subjt:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL

Query:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY
        SIVSDRDKIFLS FW+E+FRLSGTKLN++TAYHPQSDGQTEVVNRGVETYL CFCNEKPK+W +WLPW EYWYNTTFQR+IGMTPFQ+VYGRQPPT++SY
Subjt:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY

Query:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDS
        GSTLSKNSTVEEMLQERD VL++L EHL LAQEQMK YAD+KR  VEY VG+YVFL IRPYRQ ++  +RNEKL+PRFFGPYKIVE++GPVAYRL+LP+S
Subjt:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDS

Query:  SKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLI
        SKIHPVFH+SQLRK+VG HE  QPTIQFV+ENY WKS PEEAV+YR+TVAGQWEVLV W+GLPKHEA+WESYDEMQ+KYP FHLEDKVNLKG   VRPLI
Subjt:  SKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLI

Query:  KHVYSRRKK
        KHVYSRRKK
Subjt:  KHVYSRRKK

TrEMBL top hitse value%identityAlignment
A0A5A7TAX4 Ty3/gypsy retrotransposon protein2.2e-20683.37Show/hide
Query:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL
        MKAD+KKHCEECLT QRSKSL+LSPAGLLVPL IPQ++W DISMDFVEGLPK  GFEV+LVVVDRLSKY HFLPLKHP+TAK VAELFVKE+VRLHGFPL
Subjt:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL

Query:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY
        SIVSDRDKIFLS FW+E+FRLSGTKLN++TAYHPQSDGQTEVVNRGVETYL CFCNEKPK+W +WLPW EYWYNTTFQR+IGMTPFQ+VYGRQPPT++SY
Subjt:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY

Query:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDS
        GSTLSKNSTVEEMLQERD VL++L EHL LAQEQMK YAD+KR  VEY VG+YVFLRIRPYRQ ++  +RNEKL+PRFFGPYKIVE++GPVAYRL+LP+S
Subjt:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDS

Query:  SKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLI
        SKIHPVFH+SQLRK+VG HE  QPTIQFV+ENY WKS PEEAV+YR+TVAGQWEVLV W+GLPKHEA+WESYDEMQ+KYP FHLEDKVNLKG   VRPLI
Subjt:  SKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLI

Query:  KHVYSRRKK
        KHVYSRRKK
Subjt:  KHVYSRRKK

A0A5A7TBP9 Transposon Ty3-G Gag-Pol polyprotein1.4e-23799.75Show/hide
Query:  ECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPLSIVSDRDKIF
        ECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPLSIVSDRDKIF
Subjt:  ECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPLSIVSDRDKIF

Query:  LSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSYGSTLSKNSTV
        LSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKP+EWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSYGSTLSKNSTV
Subjt:  LSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSYGSTLSKNSTV

Query:  EEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDSSKIHPVFHIS
        EEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDSSKIHPVFHIS
Subjt:  EEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDSSKIHPVFHIS

Query:  QLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLIKHVYSRRKK
        QLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLIKHVYSRRKK
Subjt:  QLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLIKHVYSRRKK

A0A5D3BC83 Peroxidase 641.1e-20784.63Show/hide
Query:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL
        MKAD+KKHCEECLT QRSKSLALSPAGLLVPL IPQ +W DISMDFVEGLPK  GFEVILVVVDRLSKY HFLPLKHP+TAK VAELFVKE+VRLHGFPL
Subjt:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL

Query:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY
        SIVSDRDKIFLS FW+E+FRLSGTKLN++TAYHPQSDGQTEVVNRGVETYL CFCNEKPK+W +WLPW EYWYNTTFQR+IGMTPFQ+VYGRQPPT++SY
Subjt:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY

Query:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDS
        GSTLSKNSTVEEMLQERD VL +L EHLRLAQEQMK+YADRKR  VEY VG+YVFLRIRPYRQ ++  +RNEKL+PRFFGPYKIVE++GPVAYRL+LP+S
Subjt:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDS

Query:  SKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSN-VRPL
        SKIHPVFH+SQLRK+VGQHE  QPTIQFV+ENY WKS PE AVEYR+TVAGQWEVLV W+GLPKHEA+WESYDEMQ+KYP FHLEDKVNLKGG   VRPL
Subjt:  SKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSN-VRPL

Query:  IKHVYSRRKK
        IKHVYSRRKK
Subjt:  IKHVYSRRKK

A0A5D3BTR1 Transposon Ty3-G Gag-Pol polyprotein3.7e-21497.81Show/hide
Query:  MDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPLSIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVV
        MDFVEGLPKFGGFEVILVVVDRLSKY HFLPLKHPFTAKLVAELFVK+V RLHGFPLSIVSDRDKIFLSHFWTELFRLSGTKLNRN AYHPQSDGQTEVV
Subjt:  MDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPLSIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVV

Query:  NRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSYGSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKR
        NRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQ+AIGMTPFQIVYGRQPPTIMSYGSTLSKNST EEMLQERDAVLITLCEHLRLAQEQMKVYADRKR
Subjt:  NRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSYGSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKR

Query:  PNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDSSKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAV
        PNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRF GPYKIVEKVGP+AYRLELPDSSKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAV
Subjt:  PNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDSSKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAV

Query:  EYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLIKHVYSRRKK
        EYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLIKHVYSRRKK
Subjt:  EYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLIKHVYSRRKK

A0A5D3DT65 Ty3/gypsy retrotransposon protein8.2e-20683.13Show/hide
Query:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL
        MKAD+KKHCEECLT QRSKSL+LSPAGLLVPL IPQ++W DISMDFVEGLPK  GFEV+LVVVDRLSKY HFLPLKHP+TAK VAELFVKE+VRLHGFPL
Subjt:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL

Query:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY
        SIVSDRDKIFLS FW+E+FRLSGTKLN++TAYHPQSDGQTEVVNRGVETYL CFCNEKPK+W +WLPW EYWYNTTFQR+IGMTPFQ+VYGRQPPT++SY
Subjt:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY

Query:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDS
        GSTLSKNSTVEEMLQERD VL++L EHL LAQEQMK YAD+KR  VEY VG+YVFL IRPYRQ ++  +RNEKL+PRFFGPYKIVE++GPVAYRL+LP+S
Subjt:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDS

Query:  SKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLI
        SKIHPVFH+SQLRK+VG HE  QPTIQFV+ENY WKS PEEAV+YR+TVAGQWEVLV W+GLPKHEA+WESYDEMQ+KYP FHLEDKVNLKG   VRPLI
Subjt:  SKIHPVFHISQLRKLVGQHENLQPTIQFVNENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLI

Query:  KHVYSRRKK
        KHVYSRRKK
Subjt:  KHVYSRRKK

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein9.2e-4534.07Show/hide
Query:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL
        ++  ++++ + C T Q +KS    P G L P+   +  W  +SMDF+  LP+  G+  + VVVDR SK    +P     TA+  A +F + V+   G P 
Subjt:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL

Query:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY
         I++D D IF S  W +        +  +  Y PQ+DGQTE  N+ VE  L C C+  P  WV  +   +  YN     A  MTPF+IV+   P   +S 
Subjt:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY

Query:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNV-EYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPD
            S +   +E  QE   V  T+ EHL     +MK Y D K   + E+  GD V ++    R  T +  ++ KL+P F GP+ +++K GP  Y L+LPD
Subjt:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNV-EYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPD

Query:  SSK--IHPVFHISQLRK
        S K      FH+S L K
Subjt:  SSK--IHPVFHISQLRK

P0CT35 Transposon Tf2-2 polyprotein9.2e-4534.07Show/hide
Query:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL
        ++  ++++ + C T Q +KS    P G L P+   +  W  +SMDF+  LP+  G+  + VVVDR SK    +P     TA+  A +F + V+   G P 
Subjt:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL

Query:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY
         I++D D IF S  W +        +  +  Y PQ+DGQTE  N+ VE  L C C+  P  WV  +   +  YN     A  MTPF+IV+   P   +S 
Subjt:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY

Query:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNV-EYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPD
            S +   +E  QE   V  T+ EHL     +MK Y D K   + E+  GD V ++    R  T +  ++ KL+P F GP+ +++K GP  Y L+LPD
Subjt:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNV-EYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPD

Query:  SSK--IHPVFHISQLRK
        S K      FH+S L K
Subjt:  SSK--IHPVFHISQLRK

P0CT36 Transposon Tf2-3 polyprotein9.2e-4534.07Show/hide
Query:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL
        ++  ++++ + C T Q +KS    P G L P+   +  W  +SMDF+  LP+  G+  + VVVDR SK    +P     TA+  A +F + V+   G P 
Subjt:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL

Query:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY
         I++D D IF S  W +        +  +  Y PQ+DGQTE  N+ VE  L C C+  P  WV  +   +  YN     A  MTPF+IV+   P   +S 
Subjt:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY

Query:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNV-EYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPD
            S +   +E  QE   V  T+ EHL     +MK Y D K   + E+  GD V ++    R  T +  ++ KL+P F GP+ +++K GP  Y L+LPD
Subjt:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNV-EYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPD

Query:  SSK--IHPVFHISQLRK
        S K      FH+S L K
Subjt:  SSK--IHPVFHISQLRK

P0CT41 Transposon Tf2-12 polyprotein9.2e-4534.07Show/hide
Query:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL
        ++  ++++ + C T Q +KS    P G L P+   +  W  +SMDF+  LP+  G+  + VVVDR SK    +P     TA+  A +F + V+   G P 
Subjt:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL

Query:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY
         I++D D IF S  W +        +  +  Y PQ+DGQTE  N+ VE  L C C+  P  WV  +   +  YN     A  MTPF+IV+   P   +S 
Subjt:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY

Query:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNV-EYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPD
            S +   +E  QE   V  T+ EHL     +MK Y D K   + E+  GD V ++    R  T +  ++ KL+P F GP+ +++K GP  Y L+LPD
Subjt:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNV-EYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPD

Query:  SSK--IHPVFHISQLRK
        S K      FH+S L K
Subjt:  SSK--IHPVFHISQLRK

Q9UR07 Transposon Tf2-11 polyprotein9.2e-4534.07Show/hide
Query:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL
        ++  ++++ + C T Q +KS    P G L P+   +  W  +SMDF+  LP+  G+  + VVVDR SK    +P     TA+  A +F + V+   G P 
Subjt:  MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPL

Query:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY
         I++D D IF S  W +        +  +  Y PQ+DGQTE  N+ VE  L C C+  P  WV  +   +  YN     A  MTPF+IV+   P   +S 
Subjt:  SIVSDRDKIFLSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSY

Query:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNV-EYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPD
            S +   +E  QE   V  T+ EHL     +MK Y D K   + E+  GD V ++    R  T +  ++ KL+P F GP+ +++K GP  Y L+LPD
Subjt:  GSTLSKNSTVEEMLQERDAVLITLCEHLRLAQEQMKVYADRKRPNV-EYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPD

Query:  SSK--IHPVFHISQLRK
        S K      FH+S L K
Subjt:  SSK--IHPVFHISQLRK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCTGATGTTAAAAAACACTGTGAAGAGTGTTTAACATCCCAAAGAAGTAAATCATTAGCTTTGTCTCCAGCCGGGTTGTTAGTACCGTTATATATTCCTCAATC
CATATGGAGAGATATTTCAATGGATTTTGTGGAAGGTCTTCCAAAATTTGGCGGATTTGAAGTGATTCTGGTCGTGGTGGATAGATTGAGTAAATATGAACATTTTCTTC
CACTTAAACATCCTTTTACTGCTAAGCTGGTGGCAGAATTATTTGTGAAAGAAGTAGTGAGGCTGCATGGTTTTCCTTTGTCCATAGTGTCGGATAGAGACAAGATTTTC
CTTAGTCATTTCTGGACTGAGCTGTTTCGTTTATCGGGCACTAAACTGAATAGAAACACGGCCTATCATCCTCAATCTGACGGCCAAACTGAGGTTGTCAACAGAGGAGT
GGAGACTTACTTATGGTGCTTTTGTAATGAGAAGCCTAAGGAGTGGGTGAGGTGGCTTCCATGGGCGGAATATTGGTATAACACCACTTTCCAACGGGCTATCGGGATGA
CTCCTTTTCAGATTGTTTATGGTCGACAACCTCCTACTATTATGTCTTATGGAAGTACCCTTTCTAAGAATTCAACTGTGGAGGAGATGTTGCAGGAAAGGGATGCGGTT
CTGATTACTTTGTGTGAACATTTGCGCTTAGCACAGGAGCAAATGAAAGTGTATGCGGATCGTAAAAGGCCAAATGTAGAATATTGTGTGGGTGATTATGTGTTTCTGCG
TATTCGTCCTTATCGACAAGCTACTCTGTGGAGGAAACGAAATGAAAAGCTTTCGCCCCGATTTTTTGGTCCTTATAAAATCGTAGAGAAGGTTGGACCTGTTGCTTATC
GCCTTGAGTTACCGGACAGTTCAAAAATTCATCCTGTTTTTCACATTTCACAGTTGAGAAAGTTAGTTGGACAGCATGAGAATTTACAGCCAACTATTCAGTTTGTTAAT
GAGAATTATGAGTGGAAATCCATTCCGGAAGAGGCTGTTGAGTATCGAAAGACTGTGGCTGGACAATGGGAAGTTTTGGTAAGTTGGGAAGGCTTACCTAAGCATGAAGC
TACTTGGGAATCCTATGATGAAATGCAATTAAAATACCCAACTTTTCACCTTGAGGACAAGGTGAATTTGAAAGGGGGGAGTAATGTTAGACCCCTTATTAAGCATGTGT
ATAGTAGAAGGAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCTGATGTTAAAAAACACTGTGAAGAGTGTTTAACATCCCAAAGAAGTAAATCATTAGCTTTGTCTCCAGCCGGGTTGTTAGTACCGTTATATATTCCTCAATC
CATATGGAGAGATATTTCAATGGATTTTGTGGAAGGTCTTCCAAAATTTGGCGGATTTGAAGTGATTCTGGTCGTGGTGGATAGATTGAGTAAATATGAACATTTTCTTC
CACTTAAACATCCTTTTACTGCTAAGCTGGTGGCAGAATTATTTGTGAAAGAAGTAGTGAGGCTGCATGGTTTTCCTTTGTCCATAGTGTCGGATAGAGACAAGATTTTC
CTTAGTCATTTCTGGACTGAGCTGTTTCGTTTATCGGGCACTAAACTGAATAGAAACACGGCCTATCATCCTCAATCTGACGGCCAAACTGAGGTTGTCAACAGAGGAGT
GGAGACTTACTTATGGTGCTTTTGTAATGAGAAGCCTAAGGAGTGGGTGAGGTGGCTTCCATGGGCGGAATATTGGTATAACACCACTTTCCAACGGGCTATCGGGATGA
CTCCTTTTCAGATTGTTTATGGTCGACAACCTCCTACTATTATGTCTTATGGAAGTACCCTTTCTAAGAATTCAACTGTGGAGGAGATGTTGCAGGAAAGGGATGCGGTT
CTGATTACTTTGTGTGAACATTTGCGCTTAGCACAGGAGCAAATGAAAGTGTATGCGGATCGTAAAAGGCCAAATGTAGAATATTGTGTGGGTGATTATGTGTTTCTGCG
TATTCGTCCTTATCGACAAGCTACTCTGTGGAGGAAACGAAATGAAAAGCTTTCGCCCCGATTTTTTGGTCCTTATAAAATCGTAGAGAAGGTTGGACCTGTTGCTTATC
GCCTTGAGTTACCGGACAGTTCAAAAATTCATCCTGTTTTTCACATTTCACAGTTGAGAAAGTTAGTTGGACAGCATGAGAATTTACAGCCAACTATTCAGTTTGTTAAT
GAGAATTATGAGTGGAAATCCATTCCGGAAGAGGCTGTTGAGTATCGAAAGACTGTGGCTGGACAATGGGAAGTTTTGGTAAGTTGGGAAGGCTTACCTAAGCATGAAGC
TACTTGGGAATCCTATGATGAAATGCAATTAAAATACCCAACTTTTCACCTTGAGGACAAGGTGAATTTGAAAGGGGGGAGTAATGTTAGACCCCTTATTAAGCATGTGT
ATAGTAGAAGGAAGAAATAG
Protein sequenceShow/hide protein sequence
MKADVKKHCEECLTSQRSKSLALSPAGLLVPLYIPQSIWRDISMDFVEGLPKFGGFEVILVVVDRLSKYEHFLPLKHPFTAKLVAELFVKEVVRLHGFPLSIVSDRDKIF
LSHFWTELFRLSGTKLNRNTAYHPQSDGQTEVVNRGVETYLWCFCNEKPKEWVRWLPWAEYWYNTTFQRAIGMTPFQIVYGRQPPTIMSYGSTLSKNSTVEEMLQERDAV
LITLCEHLRLAQEQMKVYADRKRPNVEYCVGDYVFLRIRPYRQATLWRKRNEKLSPRFFGPYKIVEKVGPVAYRLELPDSSKIHPVFHISQLRKLVGQHENLQPTIQFVN
ENYEWKSIPEEAVEYRKTVAGQWEVLVSWEGLPKHEATWESYDEMQLKYPTFHLEDKVNLKGGSNVRPLIKHVYSRRKK