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Cmc05g0138341 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0138341
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein
Genome locationCMiso1.1chr05:22621812..22622256
RNA-Seq ExpressionCmc05g0138341
SyntenyCmc05g0138341
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016787 - hydrolase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026210.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.2e-1676.56Show/hide
Query:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLK---TITSNKPCTDPQ
        MVAMFLHILVHDVKNCVIQREF+RS ETISRHFNL+LL V RLHDEL+K    +T+N  CTDP+
Subjt:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLK---TITSNKPCTDPQ
KAA0042272.1 retrotransposon protein [Cucumis melo var. makuwa]4.6e-1476.67Show/hide
Query:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLKTITS-NKPCTD
        MVAMFLHI+ HDVKN VI++EFMRSDETISRHFN+VLLAV RLHDELLK     N  CTD
Subjt:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLKTITS-NKPCTD
KAA0045061.1 retrotransposon protein [Cucumis melo var. makuwa]4.6e-1472.58Show/hide
Query:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLK---TITSNKPCTD
        MVAMFLH+L +DVKNCVIQREF+RS ET+SRHFNLVLLAV RL+DEL+K   ++T+N  CTD
Subjt:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLK---TITSNKPCTD
KAA0065653.1 retrotransposon protein [Cucumis melo var. makuwa]2.7e-1470.31Show/hide
Query:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLK---TITSNKPCTDPQ
        MVAMFLH+L HDVKNCVIQREF+RS ET+SRHFN+VLLAV RL++EL+K   ++TSN  C D Q
Subjt:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLK---TITSNKPCTDPQ
TYK05473.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-1474.19Show/hide
Query:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLKT---ITSNKPCTD
        MVAMFLH+L HDVKNCVIQREF+RS ET+SRHFN+VLLAV RL++EL+KT   ITSN  C D
Subjt:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLKT---ITSNKPCTD
TrEMBL top hitse value%identityAlignment
A0A5A7TFS1 Retrotransposon protein2.2e-1476.67Show/hide
Query:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLKTITS-NKPCTD
        MVAMFLHI+ HDVKN VI++EFMRSDETISRHFN+VLLAV RLHDELLK     N  CTD
Subjt:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLKTITS-NKPCTD
A0A5D3BBK6 Retrotransposon protein2.2e-1472.58Show/hide
Query:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLK---TITSNKPCTD
        MVAMFLH+L +DVKNCVIQREF+RS ET+SRHFNLVLLAV RL+DEL+K   ++T+N  CTD
Subjt:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLK---TITSNKPCTD
A0A5D3BTL9 Retrotransposon protein1.3e-1470.31Show/hide
Query:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLK---TITSNKPCTDPQ
        MVAMFLH+L HDVKNCVIQREF+RS ET+SRHFN+VLLAV RL++EL+K   ++TSN  C D Q
Subjt:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLK---TITSNKPCTDPQ
A0A5D3C0H4 Retrotransposon protein9.9e-1574.19Show/hide
Query:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLKT---ITSNKPCTD
        MVAMFLH+L HDVKNCVIQREF+RS ET+SRHFN+VLLAV RL++EL+KT   ITSN  C D
Subjt:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLKT---ITSNKPCTD
A0A5D3E4K4 Putative nuclease HARBI11.1e-1676.56Show/hide
Query:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLK---TITSNKPCTDPQ
        MVAMFLHILVHDVKNCVIQREF+RS ETISRHFNL+LL V RLHDEL+K    +T+N  CTDP+
Subjt:  MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLK---TITSNKPCTDPQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCAATGTTCCTGCACATACTAGTGCATGACGTGAAGAATTGTGTTATCCAAAGGGAGTTCATGCGATCCGATGAGACAATTTCCCGACATTTCAACCTAGTCTT
GTTGGCTGTGCCACGACTACATGACGAGTTATTGAAAACCATAACCAGTAACAAACCATGCACAGATCCCCAATGA
mRNA sequenceShow/hide mRNA sequence
GATGGTTGCAATGTTCCTGCACATACTAGTGCATGACGTGAAGAATTGTGTTATCCAAAGGGAGTTCATGCGATCCGATGAGACAATTTCCCGACATTTCAACCTAGTCT
TGTTGGCTGTGCCACGACTACATGACGAGTTATTGAAAACCATAACCAGTAACAAACCATGCACAGATCCCCAATGAAGGTGGTTTGAGATGACACATACATAAAGGTGA
ACATGATGGCAATTGGTCGATCGAGATATAGAATGCAAAAAGTCGAAGTTGTCACAAATGTTCTGGGAGTATGTGTTACAAAAAGGCGATTTTGTGTTCGTCTTAGCCGA
CTGAGAAGGATCCA
Protein sequenceShow/hide protein sequence
MVAMFLHILVHDVKNCVIQREFMRSDETISRHFNLVLLAVPRLHDELLKTITSNKPCTDPQ