| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032541.1 pol protein [Cucumis melo var. makuwa] | 1.8e-103 | 88.68 | Show/hide |
Query: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
M LCIDYRELNKV VKNRYPLPRIDDLFDQLQGAT F+KI+LR GY+QLRIRD DIPKTAF SRYGHYKF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
IVFIDDILIYSKTEAEHE+HL+QVLETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVS+D +KIEAVT+WPRPSTVSE+RSFLGLA YYRRF EDFSR
Subjt: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
Query: IASPLTQLIRKG
IASPLTQL RKG
Subjt: IASPLTQLIRKG
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| KAA0035890.1 pol protein [Cucumis melo var. makuwa] | 4.0e-103 | 88.21 | Show/hide |
Query: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
M LCIDYRELNKV VKNRYPLPRIDDLFDQLQGAT F+KINLR GY+QLRIRD DIPKTAFHSRYGHY+F+VMSFGLTNAPAV MDLMNRVFKDFLD+FV
Subjt: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
IVFIDDILIYSK EAEHE+HL+QVLETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVS+D +KIEAVT+WPRPSTVSE+RSFLGLA YYRRF EDFSR
Subjt: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
Query: IASPLTQLIRKG
IASPLTQL RKG
Subjt: IASPLTQLIRKG
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| KAA0054634.1 pol protein [Cucumis melo var. makuwa] | 6.2e-104 | 88.21 | Show/hide |
Query: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MCLCIDYRELNKV VKNRYPLPRIDDLFDQLQGAT F+KI+LR GY+QLRIRD DIPKT F SRYGHY+F+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
IVFIDDILIYSKTEAEHE+HL+QVLETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVS+D +KIEAVT+WPRPSTVSE+RSFLGLA YYRRF EDFSR
Subjt: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
Query: IASPLTQLIRKG
IASPLTQL RKG
Subjt: IASPLTQLIRKG
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| KAA0055583.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 7.3e-113 | 97.2 | Show/hide |
Query: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFH RY HYKFIVMSFGLTNAPAVFMDLM RVFKDFLDTFV
Subjt: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
IVFIDDILIYSKT AEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVS+DQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRF EDFSR
Subjt: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
Query: IASPLTQLIRKGLL
IASPLTQLIRKGLL
Subjt: IASPLTQLIRKGLL
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| KAA0058812.1 pol protein [Cucumis melo var. makuwa] | 1.4e-103 | 87.74 | Show/hide |
Query: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
M LCIDYRELNKV +KNRYPLPRIDDLFDQLQGAT F+KI+LR GY+QLRIRD DIPKTAFHSRYGHY+F+VMSFGLTNAPAVFMDLMNRVFKDF+D+FV
Subjt: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
IVFIDDILIYSKTEAEHE+HL+QVLETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVS+D +KIEAVT+WPRPSTVSE+RSFLGLA YYRRF EDFSR
Subjt: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
Query: IASPLTQLIRKG
IASPLTQL RKG
Subjt: IASPLTQLIRKG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SSL3 Reverse transcriptase | 8.7e-104 | 88.68 | Show/hide |
Query: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
M LCIDYRELNKV VKNRYPLPRIDDLFDQLQGAT F+KI+LR GY+QLRIRD DIPKTAF SRYGHYKF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
IVFIDDILIYSKTEAEHE+HL+QVLETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVS+D +KIEAVT+WPRPSTVSE+RSFLGLA YYRRF EDFSR
Subjt: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
Query: IASPLTQLIRKG
IASPLTQL RKG
Subjt: IASPLTQLIRKG
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| A0A5A7SXW6 Reverse transcriptase | 1.9e-103 | 88.21 | Show/hide |
Query: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
M LCIDYRELNKV VKNRYPLPRIDDLFDQLQGAT F+KINLR GY+QLRIRD DIPKTAFHSRYGHY+F+VMSFGLTNAPAV MDLMNRVFKDFLD+FV
Subjt: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
IVFIDDILIYSK EAEHE+HL+QVLETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVS+D +KIEAVT+WPRPSTVSE+RSFLGLA YYRRF EDFSR
Subjt: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
Query: IASPLTQLIRKG
IASPLTQL RKG
Subjt: IASPLTQLIRKG
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| A0A5A7UHL7 Reverse transcriptase | 3.0e-104 | 88.21 | Show/hide |
Query: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MCLCIDYRELNKV VKNRYPLPRIDDLFDQLQGAT F+KI+LR GY+QLRIRD DIPKT F SRYGHY+F+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
IVFIDDILIYSKTEAEHE+HL+QVLETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVS+D +KIEAVT+WPRPSTVSE+RSFLGLA YYRRF EDFSR
Subjt: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
Query: IASPLTQLIRKG
IASPLTQL RKG
Subjt: IASPLTQLIRKG
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| A0A5A7UI28 Ty3-gypsy retrotransposon protein | 3.5e-113 | 97.2 | Show/hide |
Query: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFH RY HYKFIVMSFGLTNAPAVFMDLM RVFKDFLDTFV
Subjt: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
IVFIDDILIYSKT AEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVS+DQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRF EDFSR
Subjt: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
Query: IASPLTQLIRKGLL
IASPLTQLIRKGLL
Subjt: IASPLTQLIRKGLL
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| A0A5A7USG7 Reverse transcriptase | 6.7e-104 | 87.74 | Show/hide |
Query: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
M LCIDYRELNKV +KNRYPLPRIDDLFDQLQGAT F+KI+LR GY+QLRIRD DIPKTAFHSRYGHY+F+VMSFGLTNAPAVFMDLMNRVFKDF+D+FV
Subjt: MCLCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
IVFIDDILIYSKTEAEHE+HL+QVLETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVS+D +KIEAVT+WPRPSTVSE+RSFLGLA YYRRF EDFSR
Subjt: IVFIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSR
Query: IASPLTQLIRKG
IASPLTQL RKG
Subjt: IASPLTQLIRKG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 7.5e-44 | 37.91 | Show/hide |
Query: LCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIV
+ IDYR+LN++ V +R+P+P +D++ +L FT I+L G++Q+ + + KTAF +++GHY+++ M FGL NAPA F MN + + L+ +V
Subjt: LCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIV
Query: FIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSRIA
++DDI+++S + EH + L V E L L + KCEF ++ +FLGHV++ +G+ + KIEA+ +P P+ E+++FLGL YYR+F +F+ IA
Subjt: FIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSRIA
Query: SPLTQLIRKGL
P+T+ ++K +
Subjt: SPLTQLIRKGL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 7.5e-44 | 38.65 | Show/hide |
Query: IDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFI
IDYR+LN++ + +RYP+P +D++ +L FT I+L G++Q+ + + I KTAF ++ GHY+++ M FGL NAPA F MN + + L+ +V++
Subjt: IDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFI
Query: DDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSRIASP
DDI+I+S + EH + V L L + KCEF K+ +FLGH+V+ +G+ + K++A+ S+P P+ E+R+FLGL YYR+F +++ IA P
Subjt: DDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSRIASP
Query: LTQLIRK
+T ++K
Subjt: LTQLIRK
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.6e-41 | 42.03 | Show/hide |
Query: LCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIV
LC+DYR LNK + + +PLPRID+L ++ A FT ++L GY+Q+ + D KTAF + G Y++ VM FGL NAP+ F M F+D FV V
Subjt: LCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIV
Query: FIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSRIA
++DDILI+S++ EH KHL VLE L+ L K KC+F ++ FLG+ + + ++ Q K A+ +P P TV + + FLG+ +YYRRF + S+IA
Subjt: FIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSRIA
Query: SPLTQLI
P+ I
Subjt: SPLTQLI
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.2e-41 | 37.02 | Show/hide |
Query: LCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIV
+ +D++ LN V + + YP+P I+ L A FT ++L G++Q+ +++SDIPKTAF + G Y+F+ + FGL NAPA+F +++ + ++ + V
Subjt: LCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIV
Query: FIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSRIA
+IDDI+++S+ H K+L VL +L L K F +V FLG++V+++G+ D K+ A++ P P++V E++ FLG+ SYYR+F +D++++A
Subjt: FIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSRIA
Query: SPLTQLIR
PLT L R
Subjt: SPLTQLIR
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.6e-41 | 42.03 | Show/hide |
Query: LCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIV
LC+DYR LNK + + +PLPRID+L ++ A FT ++L GY+Q+ + D KTAF + G Y++ VM FGL NAP+ F M F+D FV V
Subjt: LCIDYRELNKVAVKNRYPLPRIDDLFDQLQGATSFTKINLRLGYYQLRIRDSDIPKTAFHSRYGHYKFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIV
Query: FIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSRIA
++DDILI+S++ EH KHL VLE L+ L K KC+F ++ FLG+ + + ++ Q K A+ +P P TV + + FLG+ +YYRRF + S+IA
Subjt: FIDDILIYSKTEAEHEKHLYQVLETLRANQLYAKFSKCEFWLKKVSFLGHVVSSEGVSIDQSKIEAVTSWPRPSTVSEVRSFLGLASYYRRFGEDFSRIA
Query: SPLTQLI
P+ I
Subjt: SPLTQLI
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