; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc05g0139111 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0139111
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr05:23643378..23644442
RNA-Seq ExpressionCmc05g0139111
SyntenyCmc05g0139111
Gene Ontology termsGO:0006488 - dolichol-linked oligosaccharide biosynthetic process (biological process)
GO:0006886 - intracellular protein transport (biological process)
GO:0007033 - vacuole organization (biological process)
GO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025139.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]5.5e-16093.29Show/hide
Query:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
        MRYCEECAICQRNKSSALSP GLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFV+EVIRLHG PRSIVSD
Subjt:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD

Query:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET
        RDKVFLSHFWKELF LAGTKLNRSSSYHPQSDGQTEV NKS ETYLRCF GERPHEWSQWIHW +YWYNTTYH SIGITPFQAVYG LPPPLVYYGDMET
Subjt:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI
        PNSTLDQ LKDRD+ALGALKEHLKLAQERMKKQADTKRREV+FQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYF PYRILERI +VAY LELP DA I
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI

KAA0037196.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.1e-15991.61Show/hide
Query:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
        MRYCEECAICQRNKSSAL+PAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEV+RLHGYPRSIVSD
Subjt:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD

Query:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET
        RDKVFLSHFWKELF LAGTKLNRSSSYHPQSDGQTEV NKS ETYLRCF GE+P EWSQW+HW +YWYNTTYHSSIGITPFQAVYG LPPPL+Y+GDMET
Subjt:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI
        PNSTLDQQLKDRDI LGALKEHLKLAQERMKKQAD+KRREV+FQEGD VFLKLRPYRQ S+RKKRNEKLSPKYFGPYR+LERI KVAY LELP +AAI
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI

KAA0052373.1 peroxidase 64 [Cucumis melo var. makuwa]1.0e-16193.96Show/hide
Query:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
        MRYCEECAICQRNK+SALSPAGLLMPLEIPDAIWSDISMDFIEGLPKS+GWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
Subjt:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD

Query:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET
        RDKVFLSHFWKELF LAGTKLNRSSSYHPQSDGQTEV NKS ETYLRCF GERPHEWSQWIHW KYWYNTTYHSSIGITPFQAVYG LPPPL+YYGDMET
Subjt:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI
        PNSTL+QQLKDRD+ALGALKEHLKLAQERMKKQADTKRREV+FQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPY ILERI +VAY LELP  AAI
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI

KAA0067255.1 peroxidase 64 [Cucumis melo var. makuwa]1.1e-20398.59Show/hide
Query:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
        MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
Subjt:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD

Query:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET
        RDKVFLSHFWKELF LAGTKLNRSSSYHPQSDGQTEVANKS ETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET
Subjt:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAICH
        PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAICH
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAICH

Query:  NRNFSTRLCGTCLTRSTSQLFEIRNPRTNSRYDVASLLVLGKMFLKNGREKVNS
        N NFSTRLCGTCLTRSTSQLFEIRNP+TNS YDVASLLVLGKMFLKNGREKVNS
Subjt:  NRNFSTRLCGTCLTRSTSQLFEIRNPRTNSRYDVASLLVLGKMFLKNGREKVNS

TYK13876.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.1e-15991.61Show/hide
Query:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
        MRYCEECAICQRNKSSAL+PAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEV+RLHGYPRSIVSD
Subjt:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD

Query:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET
        RDKVFLSHFWKELF LAGTKLNRSSSYHPQSDGQTEV NKS ETYLRCF GE+P EWSQW+HW +YWYNTTYHSSIGITPFQAVYG LPPPL+Y+GDMET
Subjt:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI
        PNSTLDQQLKDRDI LGALKEHLKLAQERMKKQAD+KRREV+FQEGD VFLKLRPYRQ S+RKKRNEKLSPKYFGPYR+LERI KVAY LELP +AAI
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI

TrEMBL top hitse value%identityAlignment
A0A5A7T4Y0 Ty3/gypsy retrotransposon protein1.0e-15991.61Show/hide
Query:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
        MRYCEECAICQRNKSSAL+PAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEV+RLHGYPRSIVSD
Subjt:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD

Query:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET
        RDKVFLSHFWKELF LAGTKLNRSSSYHPQSDGQTEV NKS ETYLRCF GE+P EWSQW+HW +YWYNTTYHSSIGITPFQAVYG LPPPL+Y+GDMET
Subjt:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI
        PNSTLDQQLKDRDI LGALKEHLKLAQERMKKQAD+KRREV+FQEGD VFLKLRPYRQ S+RKKRNEKLSPKYFGPYR+LERI KVAY LELP +AAI
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI

A0A5A7VNF4 Peroxidase 645.1e-20498.59Show/hide
Query:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
        MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
Subjt:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD

Query:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET
        RDKVFLSHFWKELF LAGTKLNRSSSYHPQSDGQTEVANKS ETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET
Subjt:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAICH
        PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAICH
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAICH

Query:  NRNFSTRLCGTCLTRSTSQLFEIRNPRTNSRYDVASLLVLGKMFLKNGREKVNS
        N NFSTRLCGTCLTRSTSQLFEIRNP+TNS YDVASLLVLGKMFLKNGREKVNS
Subjt:  NRNFSTRLCGTCLTRSTSQLFEIRNPRTNSRYDVASLLVLGKMFLKNGREKVNS

A0A5D3CD19 Peroxidase 644.8e-16293.96Show/hide
Query:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
        MRYCEECAICQRNK+SALSPAGLLMPLEIPDAIWSDISMDFIEGLPKS+GWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
Subjt:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD

Query:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET
        RDKVFLSHFWKELF LAGTKLNRSSSYHPQSDGQTEV NKS ETYLRCF GERPHEWSQWIHW KYWYNTTYHSSIGITPFQAVYG LPPPL+YYGDMET
Subjt:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI
        PNSTL+QQLKDRD+ALGALKEHLKLAQERMKKQADTKRREV+FQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPY ILERI +VAY LELP  AAI
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI

A0A5D3CU05 Ty3/gypsy retrotransposon protein1.0e-15991.61Show/hide
Query:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
        MRYCEECAICQRNKSSAL+PAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEV+RLHGYPRSIVSD
Subjt:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD

Query:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET
        RDKVFLSHFWKELF LAGTKLNRSSSYHPQSDGQTEV NKS ETYLRCF GE+P EWSQW+HW +YWYNTTYHSSIGITPFQAVYG LPPPL+Y+GDMET
Subjt:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI
        PNSTLDQQLKDRDI LGALKEHLKLAQERMKKQAD+KRREV+FQEGD VFLKLRPYRQ S+RKKRNEKLSPKYFGPYR+LERI KVAY LELP +AAI
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI

A0A5D3DIM6 Transposon Ty3-G Gag-Pol polyprotein2.6e-16093.29Show/hide
Query:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD
        MRYCEECAICQRNKSSALSP GLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFV+EVIRLHG PRSIVSD
Subjt:  MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSD

Query:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET
        RDKVFLSHFWKELF LAGTKLNRSSSYHPQSDGQTEV NKS ETYLRCF GERPHEWSQWIHW +YWYNTTYH SIGITPFQAVYG LPPPLVYYGDMET
Subjt:  RDKVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI
        PNSTLDQ LKDRD+ALGALKEHLKLAQERMKKQADTKRREV+FQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYF PYRILERI +VAY LELP DA I
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAI

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.7e-3933.67Show/hide
Query:  YCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSDRD
        Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ + VVVDR SK    +      TA+  A  F + VI   G P+ I++D D
Subjt:  YCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSDRD

Query:  KVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLP--PPLVYYGDMET
         +F S  WK+        +  S  Y PQ+DGQTE  N++ E  LRC     P+ W   I   +  YN   HS+  +TPF+ V+   P   PL    ++ +
Subjt:  KVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLP--PPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREV-KFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELP
         +   D+  ++       +KEHL     +MKK  D K +E+ +FQ GD V +K    R  +    ++ KL+P + GP+ +L++     Y L+LP
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREV-KFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELP

P0CT35 Transposon Tf2-2 polyprotein1.7e-3933.67Show/hide
Query:  YCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSDRD
        Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ + VVVDR SK    +      TA+  A  F + VI   G P+ I++D D
Subjt:  YCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSDRD

Query:  KVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLP--PPLVYYGDMET
         +F S  WK+        +  S  Y PQ+DGQTE  N++ E  LRC     P+ W   I   +  YN   HS+  +TPF+ V+   P   PL    ++ +
Subjt:  KVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLP--PPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREV-KFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELP
         +   D+  ++       +KEHL     +MKK  D K +E+ +FQ GD V +K    R  +    ++ KL+P + GP+ +L++     Y L+LP
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREV-KFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELP

P0CT36 Transposon Tf2-3 polyprotein1.7e-3933.67Show/hide
Query:  YCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSDRD
        Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ + VVVDR SK    +      TA+  A  F + VI   G P+ I++D D
Subjt:  YCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSDRD

Query:  KVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLP--PPLVYYGDMET
         +F S  WK+        +  S  Y PQ+DGQTE  N++ E  LRC     P+ W   I   +  YN   HS+  +TPF+ V+   P   PL    ++ +
Subjt:  KVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLP--PPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREV-KFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELP
         +   D+  ++       +KEHL     +MKK  D K +E+ +FQ GD V +K    R  +    ++ KL+P + GP+ +L++     Y L+LP
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREV-KFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELP

P0CT41 Transposon Tf2-12 polyprotein1.7e-3933.67Show/hide
Query:  YCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSDRD
        Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ + VVVDR SK    +      TA+  A  F + VI   G P+ I++D D
Subjt:  YCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSDRD

Query:  KVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLP--PPLVYYGDMET
         +F S  WK+        +  S  Y PQ+DGQTE  N++ E  LRC     P+ W   I   +  YN   HS+  +TPF+ V+   P   PL    ++ +
Subjt:  KVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLP--PPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREV-KFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELP
         +   D+  ++       +KEHL     +MKK  D K +E+ +FQ GD V +K    R  +    ++ KL+P + GP+ +L++     Y L+LP
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREV-KFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELP

Q9UR07 Transposon Tf2-11 polyprotein1.7e-3933.67Show/hide
Query:  YCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSDRD
        Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ + VVVDR SK    +      TA+  A  F + VI   G P+ I++D D
Subjt:  YCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSDRD

Query:  KVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLP--PPLVYYGDMET
         +F S  WK+        +  S  Y PQ+DGQTE  N++ E  LRC     P+ W   I   +  YN   HS+  +TPF+ V+   P   PL    ++ +
Subjt:  KVFLSHFWKELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLP--PPLVYYGDMET

Query:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREV-KFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELP
         +   D+  ++       +KEHL     +MKK  D K +E+ +FQ GD V +K    R  +    ++ KL+P + GP+ +L++     Y L+LP
Subjt:  PNSTLDQQLKDRDIALGALKEHLKLAQERMKKQADTKRREV-KFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTATTGTGAAGAGTGCGCGATATGCCAGCGAAATAAGTCGTCAGCATTGTCACCGGCAGGGCTACTGATGCCATTGGAAATTCCAGACGCGATATGGAGTGACAT
CTCCATGGACTTCATCGAAGGTCTGCCAAAATCCAAGGGATGGGATGTGATACTAGTGGTGGTGGATAGGCTGAGTAAATATGGCCATTTTCTGTTACTGAAGCATCCTT
TCACAGCCAAGATGGTGGCTGAAACGTTTGTAAAGGAAGTGATCCGGCTTCATGGGTATCCGAGGTCGATAGTGTCCGACAGGGACAAGGTTTTCCTAAGTCATTTCTGG
AAGGAACTCTTCTGTTTAGCAGGCACTAAGCTGAACCGGAGCTCCTCATATCACCCTCAATCGGATGGTCAGACCGAGGTGGCGAACAAGAGCTTTGAAACATATTTGAG
GTGTTTTTATGGGGAAAGACCACACGAATGGAGCCAGTGGATACATTGGACAAAATATTGGTACAATACTACCTATCACAGTTCGATCGGAATCACTCCTTTCCAAGCTG
TCTATGGATGCCTACCCCCTCCACTGGTGTACTATGGAGACATGGAGACACCAAATTCAACACTGGACCAGCAATTGAAAGACAGAGATATAGCACTGGGGGCGTTGAAA
GAACACCTGAAATTAGCTCAAGAAAGGATGAAGAAACAGGCTGATACCAAGAGAAGGGAAGTAAAATTCCAAGAAGGGGATTTTGTGTTCCTCAAATTGCGACCTTATCG
ACAGGTATCCCTCAGAAAGAAAAGGAATGAAAAGTTGTCACCAAAGTACTTCGGGCCTTATCGGATCTTAGAAAGAATCGAAAAAGTGGCATACGGACTTGAACTCCCTG
GGGATGCTGCTATCTGTCACAATCGTAACTTCTCAACACGATTGTGCGGCACTTGTTTAACTCGATCAACAAGTCAGCTGTTTGAAATTCGGAATCCGCGGACAAACTCG
CGGTATGATGTAGCCTCCCTCCTCGTTCTTGGGAAAATGTTTTTAAAAAACGGGAGAGAGAAAGTAAATAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTATTGTGAAGAGTGCGCGATATGCCAGCGAAATAAGTCGTCAGCATTGTCACCGGCAGGGCTACTGATGCCATTGGAAATTCCAGACGCGATATGGAGTGACAT
CTCCATGGACTTCATCGAAGGTCTGCCAAAATCCAAGGGATGGGATGTGATACTAGTGGTGGTGGATAGGCTGAGTAAATATGGCCATTTTCTGTTACTGAAGCATCCTT
TCACAGCCAAGATGGTGGCTGAAACGTTTGTAAAGGAAGTGATCCGGCTTCATGGGTATCCGAGGTCGATAGTGTCCGACAGGGACAAGGTTTTCCTAAGTCATTTCTGG
AAGGAACTCTTCTGTTTAGCAGGCACTAAGCTGAACCGGAGCTCCTCATATCACCCTCAATCGGATGGTCAGACCGAGGTGGCGAACAAGAGCTTTGAAACATATTTGAG
GTGTTTTTATGGGGAAAGACCACACGAATGGAGCCAGTGGATACATTGGACAAAATATTGGTACAATACTACCTATCACAGTTCGATCGGAATCACTCCTTTCCAAGCTG
TCTATGGATGCCTACCCCCTCCACTGGTGTACTATGGAGACATGGAGACACCAAATTCAACACTGGACCAGCAATTGAAAGACAGAGATATAGCACTGGGGGCGTTGAAA
GAACACCTGAAATTAGCTCAAGAAAGGATGAAGAAACAGGCTGATACCAAGAGAAGGGAAGTAAAATTCCAAGAAGGGGATTTTGTGTTCCTCAAATTGCGACCTTATCG
ACAGGTATCCCTCAGAAAGAAAAGGAATGAAAAGTTGTCACCAAAGTACTTCGGGCCTTATCGGATCTTAGAAAGAATCGAAAAAGTGGCATACGGACTTGAACTCCCTG
GGGATGCTGCTATCTGTCACAATCGTAACTTCTCAACACGATTGTGCGGCACTTGTTTAACTCGATCAACAAGTCAGCTGTTTGAAATTCGGAATCCGCGGACAAACTCG
CGGTATGATGTAGCCTCCCTCCTCGTTCTTGGGAAAATGTTTTTAAAAAACGGGAGAGAGAAAGTAAATAGTTGA
Protein sequenceShow/hide protein sequence
MRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSDRDKVFLSHFW
KELFCLAGTKLNRSSSYHPQSDGQTEVANKSFETYLRCFYGERPHEWSQWIHWTKYWYNTTYHSSIGITPFQAVYGCLPPPLVYYGDMETPNSTLDQQLKDRDIALGALK
EHLKLAQERMKKQADTKRREVKFQEGDFVFLKLRPYRQVSLRKKRNEKLSPKYFGPYRILERIEKVAYGLELPGDAAICHNRNFSTRLCGTCLTRSTSQLFEIRNPRTNS
RYDVASLLVLGKMFLKNGREKVNS