; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc05g0140971 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0140971
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description60S ribosomal protein L18
Genome locationCMiso1.1chr05:25186754..25187630
RNA-Seq ExpressionCmc05g0140971
SyntenyCmc05g0140971
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000039 - Ribosomal protein L18e
IPR021131 - Ribosomal protein L18e/L15P
IPR036227 - Ribosomal L18e/L15P superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586240.1 60S ribosomal protein L18-3, partial [Cucurbita argyrosperma subsp. sororia]2.5e-6598.51Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNKPPISLSRLIK+MKGKE KIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

KAG7021075.1 60S ribosomal protein L18-3 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-6597.76Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNKPPISLSRLIK+MKGKE KIAV+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

KAG7030228.1 60S ribosomal protein L18-2 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-6597.76Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNKPPISLSRLIK+MKGKE KIAV+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

XP_008454015.1 PREDICTED: 60S ribosomal protein L18-3 [Cucumis melo]1.7e-66100Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

XP_022937764.1 60S ribosomal protein L18-3-like [Cucurbita moschata]3.3e-6597.76Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNKPPISLSRLIK+MKGKE KIAV+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

TrEMBL top hitse value%identityAlignment
A0A1S3BYV3 60S ribosomal protein L18-38.4e-67100Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

A0A5A7U3L4 60S ribosomal protein L18-38.4e-67100Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

A0A6J1FC57 60S ribosomal protein L18-3-like1.6e-6597.76Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNKPPISLSRLIK+MKGKE KIAV+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

A0A6J1HQ85 60S ribosomal protein L18-31.6e-6597.76Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNKPPISLSRLIK+MKGKE KIAV+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

A0A6J1KGZ8 60S ribosomal protein L18-21.6e-6597.76Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNKPPISLSRLIK+MKGKE KIAV+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

SwissProt top hitse value%identityAlignment
O22254 Putative 60S ribosomal protein L18-13.9e-5377.04Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFG
        MSKVNK P+SLSRL++YM GK+ KIAV+VGTVTDD+R+ +VPAL VTALRFTE+ARARI KAGGECLTFDQLAL  P   +NTVLLRGPKN+REAVKHFG
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFG

Query:  PAPGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        PAPGVPHSHTKPYVR  G+K E ARG+R SRG++V
Subjt:  PAPGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

O65729 60S ribosomal protein L18 (Fragment)6.2e-5985.07Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVN+PP+SLSRLIKYM+GKE KI VVVG VTDDIRVY+VP +KVTAL+FTETARARI+KAGGECLTFDQLALR PL  +TVLLRGPKN+REAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHSHTKPYVRSKGRKFE+ARG+R SRG+RV
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

P42791 60S ribosomal protein L18-28.7e-6185.07Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNK P+SLSRL+++M GKE KIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHSH+KPYVR+KGRKFE+ARGKR SRG++V
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

Q4PM04 60S ribosomal protein L182.2e-4871.85Show/hide
Query:  MSKVNKPPISLSRLIKYMK--GKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHF
        MS++NKP ISL+R+ ++MK  G+E  IAVVVGTVTDD+R+Y+VP L++ ALR TE ARARI KAGGE LTFDQLA++AP G+ TVL++GP+NSREA +HF
Subjt:  MSKVNKPPISLSRLIKYMK--GKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHF

Query:  GPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGYR
        GPAPGVPHSHTKPYVRSKGRKFERARG+R SR Y+
Subjt:  GPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGYR

Q940B0 60S ribosomal protein L18-37.4e-6084.33Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNK P+SLSRL+++M GK+ KIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHS+TKPYVR KGRKFE+ARGKR SRG++V
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

Arabidopsis top hitse value%identityAlignment
AT2G47570.1 Ribosomal protein L18e/L15 superfamily protein2.8e-5477.04Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFG
        MSKVNK P+SLSRL++YM GK+ KIAV+VGTVTDD+R+ +VPAL VTALRFTE+ARARI KAGGECLTFDQLAL  P   +NTVLLRGPKN+REAVKHFG
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFG

Query:  PAPGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        PAPGVPHSHTKPYVR  G+K E ARG+R SRG++V
Subjt:  PAPGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

AT2G47570.2 Ribosomal protein L18e/L15 superfamily protein2.8e-5477.04Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFG
        MSKVNK P+SLSRL++YM GK+ KIAV+VGTVTDD+R+ +VPAL VTALRFTE+ARARI KAGGECLTFDQLAL  P   +NTVLLRGPKN+REAVKHFG
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFG

Query:  PAPGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        PAPGVPHSHTKPYVR  G+K E ARG+R SRG++V
Subjt:  PAPGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

AT3G05590.1 ribosomal protein L186.2e-6285.07Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNK P+SLSRL+++M GKE KIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHSH+KPYVR+KGRKFE+ARGKR SRG++V
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV

AT5G27850.1 Ribosomal protein L18e/L15 superfamily protein5.2e-6184.33Show/hide
Query:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
        MSKVNK P+SLSRL+++M GK+ KIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP
Subjt:  MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGP

Query:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
        APGVPHS+TKPYVR KGRKFE+ARGKR SRG++V
Subjt:  APGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAGGTGAACAAGCCGCCAATTTCACTATCCAGACTTATCAAGTACATGAAGGGAAAGGAAGCGAAAATTGCTGTCGTTGTTGGAACCGTGACAGATGACATTCG
CGTTTACGAAGTCCCAGCATTGAAAGTTACAGCCTTGAGGTTCACTGAGACCGCAAGAGCCAGGATTGAGAAGGCAGGTGGTGAGTGTTTGACATTCGACCAGCTTGCCT
TGAGGGCTCCTCTTGGCCAGAATACGGTTCTTCTTCGTGGACCAAAGAACTCTCGTGAGGCCGTGAAGCACTTCGGTCCTGCTCCTGGTGTGCCTCACAGCCACACGAAA
CCATACGTGAGGTCGAAGGGAAGGAAGTTCGAGAGAGCCAGAGGAAAGAGAAACAGCAGGGGATACCGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
CTGTACCGGTTTCTTGTTCGAAGAACTGGAAGCAATTTCAATGCAGTGATCCTCAAGCGCTTGTTCATGAGCAAGGTGAACAAGCCGCCAATTTCACTATCCAGACTTAT
CAAGTACATGAAGGGAAAGGAAGCGAAAATTGCTGTCGTTGTTGGAACCGTGACAGATGACATTCGCGTTTACGAAGTCCCAGCATTGAAAGTTACAGCCTTGAGGTTCA
CTGAGACCGCAAGAGCCAGGATTGAGAAGGCAGGTGGTGAGTGTTTGACATTCGACCAGCTTGCCTTGAGGGCTCCTCTTGGCCAGAATACGGTTCTTCTTCGTGGACCA
AAGAACTCTCGTGAGGCCGTGAAGCACTTCGGTCCTGCTCCTGGTGTGCCTCACAGCCACACGAAACCATACGTGAGGTCGAAGGGAAGGAAGTTCGAGAGAGCCAGAGG
AAAGAGAAACAGCAGGGGATACCGAGTTTAATTTGTTCAACCCTTTTTGTGAGACAAAAATTCACGTTTTGCTAGACTTGAAGAAATATTATTATGTGAGACTCTATCAT
GTCTTAGTACAAGTTTTTCTTCTTATATAAACCAAAATCGGATCCGGTGATAGATATTGTTTCAAGACTTTGCAATTTTCCCCCCTCGATTATCTTCATCTGGCT
Protein sequenceShow/hide protein sequence
MSKVNKPPISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTK
PYVRSKGRKFERARGKRNSRGYRV