| GenBank top hits | e value | %identity | Alignment |
|---|
| TYJ96309.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.6e-68 | 87.25 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
YSQRK IDYDEVFAPVARL+TIRLLI LAAQNNWKIFQMDVKS+FLNGYLEEE+YLEQ GYSVKGQEDKVLKLKKALY LKQAPR WNS INKYFLDNG
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
Y+RCPYEHSLYIK + HGDI V+ LY+DDLIFTGNC SMFEDLKKAMTQ
Subjt: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
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| TYK03241.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.6e-68 | 87.25 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
YSQRK IDYDEVFAPVARL+TIRLLI LAAQNNWKIFQMDVKS+FLNGYLEEE+YLEQ GYSVKGQEDKVLKLKKALY LKQAPR WNS INKYFLDNG
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
Y+RCPYEHSLYIK + HGDI V+ LY+DDLIFTGNC SMFEDLKKAMTQ
Subjt: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
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| TYK06895.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.6e-68 | 87.25 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
YSQRK IDYDEVFAPVARL+TIRLLI LAAQNNWKIFQMDVKS+FLNGYLEEE+YLEQ GYSVKGQEDKVLKLKKALY LKQAPR WNS INKYFLDNG
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
Y+RCPYEHSLYIK + HGDI V+ LY+DDLIFTGNC SMFEDLKKAMTQ
Subjt: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
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| TYK08113.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.6e-68 | 87.25 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
YSQRK IDYDEVFAPVARL+TIRLLI LAAQNNWKIFQMDVKS+FLNGYLEEE+YLEQ GYSVKGQEDKVLKLKKALY LKQAPR WNS INKYFLDNG
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
Y+RCPYEHSLYIK + HGDI V+ LY+DDLIFTGNC SMFEDLKKAMTQ
Subjt: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
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| TYK18362.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.6e-68 | 87.25 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
YSQRK IDYDEVFAPVARL+TIRLLI LAAQNNWKIFQMDVKS+FLNGYLEEE+YLEQ GYSVKGQEDKVLKLKKALY LKQAPR WNS INKYFLDNG
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
Y+RCPYEHSLYIK + HGDI V+ LY+DDLIFTGNC SMFEDLKKAMTQ
Subjt: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SJX6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-68 | 87.25 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
YSQRK IDYDEVFAPVARL+TIRLLI LAAQNNWKIFQMDVKS+FLNGYLEEE+YLEQ GYSVKGQEDKVLKLKKALY LKQAPR WNS INKYFLDNG
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
Y+RCPYEHSLYIK + HGDI V+ LY+DDLIFTGNC SMFEDLKKAMTQ
Subjt: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
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| A0A5A7SRM0 Copia protein | 1.7e-68 | 87.25 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
YSQRK IDYDEVFAPVARL+TIRLLI LAAQNNWKIFQMDVKS+FLNGYLEEE+YLEQ GYSVKGQEDKVLKLKKALY LKQAPR WNS INKYFLDNG
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
Y+RCPYEHSLYIK + HGDI V+ LY+DDLIFTGNC SMFEDLKKAMTQ
Subjt: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
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| A0A5A7V308 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-68 | 87.25 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
YSQRK IDYDEVFAPVARL+TIRLLI LAAQNNWKIFQMDVKS+FLNGYLEEE+YLEQ GYSVKGQEDKVLKLKKALY LKQAPR WNS INKYFLDNG
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
Y+RCPYEHSLYIK + HGDI V+ LY+DDLIFTGNC SMFEDLKKAMTQ
Subjt: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
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| A0A5A7V3X9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-68 | 87.25 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
YSQRK IDYDEVFAPVARL+TIRLLI LAAQNNWKIFQMDVKS+FLNGYLEEE+YLEQ GYSVKGQEDKVLKLKKALY LKQAPR WNS INKYFLDNG
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
Y+RCPYEHSLYIK + HGDI V+ LY+DDLIFTGNC SMFEDLKKAMTQ
Subjt: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
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| A0A5D3D497 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-68 | 87.25 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
YSQRK IDYDEVFAPVARL+TIRLLI LAAQNNWKIFQMDVKS+FLNGYLEEE+YLEQ GYSVKGQEDKVLKLKKALY LKQAPR WNS INKYFLDNG
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
Y+RCPYEHSLYIK + HGDI V+ LY+DDLIFTGNC SMFEDLKKAMTQ
Subjt: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.0e-21 | 40.85 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
++Q+ +IDY+E FAPVAR+ + R ++ L Q N K+ QMDVK++FLNG L+EEIY+ G S D V KL KA+Y LKQA R W + + +
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYI--KTDSHGDIFVIYLYMDDLIF-TGNCTSM
++ + +YI K + + +I+V+ LY+DD++ TG+ T M
Subjt: YIRCPYEHSLYI--KTDSHGDIFVIYLYMDDLIF-TGNCTSM
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-25 | 38.89 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
+ Q+K ID+DE+F+PV ++ +IR ++ LAA + ++ Q+DVK++FL+G LEEEIY+EQ G+ V G++ V KL K+LY LKQAPR W + +
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLK
Y++ + +Y K S + ++ LY+DD++ G + LK
Subjt: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLK
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.7e-12 | 36.04 | Show/hide |
Query: MDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNGYIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTS
MDV ++FLN ++E IY++Q G+ + D V +L +Y LKQAP WN IN G+ R EH LY ++ S G I+ I +Y+DDL+
Subjt: MDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNGYIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTS
Query: MFEDLKKAMTQ
+++ +K+ +T+
Subjt: MFEDLKKAMTQ
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.1e-22 | 34.23 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Y+QR +DY E F+PV + +IR+++ +A +W I Q+DV ++FL G L +++Y+ Q G+ K + + V KL+KALY LKQAPR W + Y L G
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
++ + SL++ ++++ +Y+DD++ TGN ++ + ++Q
Subjt: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.6e-23 | 36.24 | Show/hide |
Query: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Y+QR +DY E F+PV + +IR+++ +A +W I Q+DV ++FL G L +E+Y+ Q G+ K + D V +L+KA+Y LKQAPR W + Y L G
Subjt: YSQRKEIDYDEVFAPVARLKTIRLLIVLAAQNNWKIFQMDVKSSFLNGYLEEEIYLEQHLGYSVKGQEDKVLKLKKALYRLKQAPRTWNSIINKYFLDNG
Query: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
++ + SL++ I+++ +Y+DD++ TGN T + + A++Q
Subjt: YIRCPYEHSLYIKTDSHGDIFVIYLYMDDLIFTGNCTSMFEDLKKAMTQ
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