; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc05g0141741 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0141741
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase
Genome locationCMiso1.1chr05:25779959..25781521
RNA-Seq ExpressionCmc05g0141741
SyntenyCmc05g0141741
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ95504.1 integrase [Cucumis melo var. makuwa]4.7e-29396.54Show/hide
Query:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM
        MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI FGNFFKEQGIHHQMTARMT QQNGVAERKNRTIM
Subjt:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM

Query:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS
        EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWC EKPSVSHL+VF SIAYSHIPNQLRGKLDDKSEKCIMVGY+ENSKAYRLYNPVS
Subjt:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS

Query:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG
        RKIII+RDVIFSEDESWNWNDDVDEAKSPFHVNI+ENEVAQELEQA+IQAVESSSSSTSSSTSNDEISPRRMRSIQEIYN TNRIN DHFANFALFAGV 
Subjt:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG

Query:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
        PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVE YKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
Subjt:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ

Query:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
        NGWKV+QMD+KSAFLNGHLK+EIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
Subjt:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL

Query:  FIGNDKFLCDDFKNSMKKEF
        F GNDKFLCDDFKNSMK EF
Subjt:  FIGNDKFLCDDFKNSMKKEF

TYJ98761.1 integrase [Cucumis melo var. makuwa]4.7e-29396.54Show/hide
Query:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM
        MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI FGNFFKEQGIHHQMTARMT QQNGVAERKNRTIM
Subjt:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM

Query:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS
        EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWC EKPSVSHL+VF SIAYSHIPNQLRGKLDDKSEKCIMVGY+ENSKAYRLYNPVS
Subjt:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS

Query:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG
        RKIII+RDVIFSEDESWNWNDDVDEAKSPFHVNI+ENEVAQELEQA+IQAVESSSSSTSSSTSNDEISPRRMRSIQEIYN TNRIN DHFANFALFAGV 
Subjt:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG

Query:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
        PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVE YKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
Subjt:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ

Query:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
        NGWKV+QMD+KSAFLNGHLK+EIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
Subjt:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL

Query:  FIGNDKFLCDDFKNSMKKEF
        F GNDKFLCDDFKNSMK EF
Subjt:  FIGNDKFLCDDFKNSMKKEF

TYK08724.1 integrase [Cucumis melo var. makuwa]2.7e-29396.54Show/hide
Query:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM
        MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI FGNFFKEQGIHHQMTARMT QQNGVAERKNRTIM
Subjt:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM

Query:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS
        EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWC EKPSVSHL+VF SIAYSHIPNQLRGKLDDKSEKCIMVGY+ENSKAYRLYNPVS
Subjt:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS

Query:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG
        RKIII+RDVIFSEDESWNWNDDVDEAKSPFHVNI+ENEVAQELEQA+IQA+ESSSSSTSSSTSNDEISPRRMRSIQEIYN TNRIN DHFANFALFAGV 
Subjt:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG

Query:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
        PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVE YKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
Subjt:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ

Query:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
        NGWKV+QMD+KSAFLNGHLK+EIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
Subjt:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL

Query:  FIGNDKFLCDDFKNSMKKEF
        F GNDKFLCDDFKNSMKKEF
Subjt:  FIGNDKFLCDDFKNSMKKEF

TYK24556.1 integrase [Cucumis melo var. makuwa]4.7e-29396.54Show/hide
Query:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM
        MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI FGNFFKEQGIHHQMTARMT QQNGVAERKNRTIM
Subjt:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM

Query:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS
        EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWC EKPSVSHL+VF SIAYSHIPNQLRGKLDDKSEKCIMVGY+ENSKAYRLYNPVS
Subjt:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS

Query:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG
        RKIII+RDVIFSEDESWNWNDDVDEAKSPFHVNI+ENEVAQELEQA+IQAVESSSSSTSSSTSNDEISPRRMRSIQEIYN TNRIN DHFANFALFAGV 
Subjt:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG

Query:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
        PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVE YKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
Subjt:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ

Query:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
        NGWKV+QMD+KSAFLNGHLK+EIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
Subjt:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL

Query:  FIGNDKFLCDDFKNSMKKEF
        F GNDKFLCDDFKNSMK EF
Subjt:  FIGNDKFLCDDFKNSMKKEF

TYK30104.1 integrase [Cucumis melo var. makuwa]1.2e-29396.73Show/hide
Query:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM
        MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI FGNFFKEQGIHHQMTARMT QQNGVAERKNRTIM
Subjt:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM

Query:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS
        EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWC EKPSVSHL+VF SIAYSHIPNQLRGKLDDKSEKCIMVGY+ENSKAYRLYNPVS
Subjt:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS

Query:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG
        RKIII+RDVIFSEDESWNWNDDVDEAKSPFHVNI+ENEVAQELEQA+IQAVESSSSSTSSSTSNDEISPRRMRSIQEIYN TNRIN DHFANFALFAGV 
Subjt:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG

Query:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
        PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVE YKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
Subjt:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ

Query:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
        NGWKV+QMD+KSAFLNGHLK+EIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
Subjt:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL

Query:  FIGNDKFLCDDFKNSMKKEF
        F GNDKFLCDDFKNSMKKEF
Subjt:  FIGNDKFLCDDFKNSMKKEF

TrEMBL top hitse value%identityAlignment
A0A5D3BJ80 Integrase2.3e-29396.54Show/hide
Query:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM
        MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI FGNFFKEQGIHHQMTARMT QQNGVAERKNRTIM
Subjt:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM

Query:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS
        EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWC EKPSVSHL+VF SIAYSHIPNQLRGKLDDKSEKCIMVGY+ENSKAYRLYNPVS
Subjt:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS

Query:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG
        RKIII+RDVIFSEDESWNWNDDVDEAKSPFHVNI+ENEVAQELEQA+IQAVESSSSSTSSSTSNDEISPRRMRSIQEIYN TNRIN DHFANFALFAGV 
Subjt:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG

Query:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
        PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVE YKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
Subjt:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ

Query:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
        NGWKV+QMD+KSAFLNGHLK+EIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
Subjt:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL

Query:  FIGNDKFLCDDFKNSMKKEF
        F GNDKFLCDDFKNSMK EF
Subjt:  FIGNDKFLCDDFKNSMKKEF

A0A5D3CBW3 Integrase1.3e-29396.54Show/hide
Query:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM
        MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI FGNFFKEQGIHHQMTARMT QQNGVAERKNRTIM
Subjt:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM

Query:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS
        EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWC EKPSVSHL+VF SIAYSHIPNQLRGKLDDKSEKCIMVGY+ENSKAYRLYNPVS
Subjt:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS

Query:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG
        RKIII+RDVIFSEDESWNWNDDVDEAKSPFHVNI+ENEVAQELEQA+IQA+ESSSSSTSSSTSNDEISPRRMRSIQEIYN TNRIN DHFANFALFAGV 
Subjt:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG

Query:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
        PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVE YKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
Subjt:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ

Query:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
        NGWKV+QMD+KSAFLNGHLK+EIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
Subjt:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL

Query:  FIGNDKFLCDDFKNSMKKEF
        F GNDKFLCDDFKNSMKKEF
Subjt:  FIGNDKFLCDDFKNSMKKEF

A0A5D3CLV1 Integrase2.3e-29396.54Show/hide
Query:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM
        MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI FGNFFKEQGIHHQMTARMT QQNGVAERKNRTIM
Subjt:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM

Query:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS
        EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWC EKPSVSHL+VF SIAYSHIPNQLRGKLDDKSEKCIMVGY+ENSKAYRLYNPVS
Subjt:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS

Query:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG
        RKIII+RDVIFSEDESWNWNDDVDEAKSPFHVNI+ENEVAQELEQA+IQAVESSSSSTSSSTSNDEISPRRMRSIQEIYN TNRIN DHFANFALFAGV 
Subjt:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG

Query:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
        PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVE YKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
Subjt:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ

Query:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
        NGWKV+QMD+KSAFLNGHLK+EIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
Subjt:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL

Query:  FIGNDKFLCDDFKNSMKKEF
        F GNDKFLCDDFKNSMK EF
Subjt:  FIGNDKFLCDDFKNSMKKEF

A0A5D3DLN8 Integrase2.3e-29396.54Show/hide
Query:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM
        MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI FGNFFKEQGIHHQMTARMT QQNGVAERKNRTIM
Subjt:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM

Query:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS
        EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWC EKPSVSHL+VF SIAYSHIPNQLRGKLDDKSEKCIMVGY+ENSKAYRLYNPVS
Subjt:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS

Query:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG
        RKIII+RDVIFSEDESWNWNDDVDEAKSPFHVNI+ENEVAQELEQA+IQAVESSSSSTSSSTSNDEISPRRMRSIQEIYN TNRIN DHFANFALFAGV 
Subjt:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG

Query:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
        PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVE YKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
Subjt:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ

Query:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
        NGWKV+QMD+KSAFLNGHLK+EIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
Subjt:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL

Query:  FIGNDKFLCDDFKNSMKKEF
        F GNDKFLCDDFKNSMK EF
Subjt:  FIGNDKFLCDDFKNSMKKEF

A0A5D3E2J1 Integrase6.0e-29496.73Show/hide
Query:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM
        MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI FGNFFKEQGIHHQMTARMT QQNGVAERKNRTIM
Subjt:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIM

Query:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS
        EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWC EKPSVSHL+VF SIAYSHIPNQLRGKLDDKSEKCIMVGY+ENSKAYRLYNPVS
Subjt:  EMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVS

Query:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG
        RKIII+RDVIFSEDESWNWNDDVDEAKSPFHVNI+ENEVAQELEQA+IQAVESSSSSTSSSTSNDEISPRRMRSIQEIYN TNRIN DHFANFALFAGV 
Subjt:  RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVG

Query:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
        PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVE YKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
Subjt:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ

Query:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
        NGWKV+QMD+KSAFLNGHLK+EIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL
Subjt:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLL

Query:  FIGNDKFLCDDFKNSMKKEF
        F GNDKFLCDDFKNSMKKEF
Subjt:  FIGNDKFLCDDFKNSMKKEF

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.8e-7032.41Show/hide
Query:  YFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI--VFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIMEMARSMLK
        YF+ F+D F+     Y +K KS+    F+ F A +E     K+  L  D G EY+      F  ++GI + +T   T Q NGV+ER  RTI E AR+M+ 
Subjt:  YFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI--VFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIMEMARSMLK

Query:  AKNLPNEFWGDAVACTVYILNRAPTKSV--PGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVSRKIIIN
           L   FWG+AV    Y++NR P++++     TPYE W ++KP + HL+VF +  Y HI N+ +GK DDKS K I VGY  N   ++L++ V+ K I+ 
Subjt:  AKNLPNEFWGDAVACTVYILNRAPTKSV--PGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVSRKIIIN

Query:  RDVIFSE-------------------DESWNWNDDVDEAK---SPFHVNINENEVAQELEQAK----------------------------IQAVESSSS
        RDV+  E                    ES N N   D  K   + F     E +  Q L+ +K                            IQ ++ S  
Subjt:  RDVIFSE-------------------DESWNWNDDVDEAK---SPFHVNINENEVAQELEQAK----------------------------IQAVESSSS

Query:  ST------------------------------------------SSSTSND--EISPRRMRSI----QEIYN-NTNRINVDHFANFALFAGVGPVTFDE-
        S                                            + T ND  EI  RR   +    Q  YN   N +N        +F  V P +FDE 
Subjt:  ST------------------------------------------SSSTSND--EISPRRMRSI----QEIYN-NTNRINVDHFANFALFAGVGPVTFDE-

Query:  AIQDEK--WKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQNGWK
          +D+K  W+ A++ E++A + N TW + + P NK  +  +WV+  K    GN   YKARLV +G+ Q+Y +DYEE FAPV RI + R ILSL  Q   K
Subjt:  AIQDEK--WKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQNGWK

Query:  VHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYV-KEDKYGKFLIVSLYVDDLLFIG
        VHQMD+K+AFLNG LK+EI++  P G       + V KL KA+YGLKQA R W+   +    +  F     +  +Y+  +    + + V LYVDD++   
Subjt:  VHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYV-KEDKYGKFLIVSLYVDDLLFIG

Query:  NDKFLCDDFKNSMKKEF
         D    ++FK  + ++F
Subjt:  NDKFLCDDFKNSMKKEF

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.0e-10438.6Show/hide
Query:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI--VFGNFFKEQGIHHQMTARMTTQQNGVAERKNRT
        M   + GGN+YF+TFIDD SRKLW+Y LK K +    F+ F A  E ++G K+K LRSD GGEY    F  +    GI H+ T   T Q NGVAER NRT
Subjt:  MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI--VFGNFFKEQGIHHQMTARMTTQQNGVAERKNRT

Query:  IMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNP
        I+E  RSML+   LP  FWG+AV    Y++NR+P+  +    P   W +++ S SHLKVF   A++H+P + R KLDDKS  CI +GY +    YRL++P
Subjt:  IMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNP

Query:  VSRKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMR-------------SIQEIYNNTN--
        V +K+I +RDV+F E E     D  ++ K+    N              +    +S++ TS+ ++ DE+S +  +              ++E+ + T   
Subjt:  VSRKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMR-------------SIQEIYNNTN--

Query:  ------------RINVDHF--ANFALFA-GVGPVTFDEAI-QDEKWKI--AMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEI--YKA
                    R+    +    + L +    P +  E +   EK ++  AM +E++++++N T++L+ELP  K+ L  KWV+  KLK DG+ ++  YKA
Subjt:  ------------RINVDHF--ANFALFA-GVGPVTFDEAI-QDEKWKI--AMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEI--YKA

Query:  RLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQNGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDS
        RLVVKG++Q+ G+D++EIF+PV ++ +IR ILSLAA    +V Q+D+K+AFL+G L++EI++ QP G+   G++  V KL K+LYGLKQAPR WY + DS
Subjt:  RLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQNGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDS

Query:  FFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFIGNDKFLCDDFKNSMKKEF
        F     + +   +  +Y K      F+I+ LYVDD+L +G DK L    K  + K F
Subjt:  FFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFIGNDKFLCDDFKNSMKKEF

P92520 Uncharacterized mitochondrial protein AtMg008205.8e-2042.37Show/hide
Query:  NRINVDHFANFALFAGVGPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIF
        N++N  +           P +   A++D  W  AM +E+DA+ RN+TW L+  P N+  LG KWV++TKL SDG ++  KARLV KG+ QE G+ + E +
Subjt:  NRINVDHFANFALFAGVGPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIF

Query:  APVTRIETIRLILSLAAQ
        +PV R  TIR IL++A Q
Subjt:  APVTRIETIRLILSLAAQ

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.4e-7429.29Show/hide
Query:  RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIMEMARSMLKA
        RY++ F+D F+R  W+Y LK+KS+    F +FK   EN+   +I T  SD GGE++    +F + GI H  +   T + NG++ERK+R I+E   ++L  
Subjt:  RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIMEMARSMLKA

Query:  KNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVSRKIIINRDV
         ++P  +W  A A  VY++NR PT  +   +P++      P+   L+VF    Y  +    + KLDDKS +C+ +GY+    AY   +  + ++ I+R V
Subjt:  KNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVSRKIIINRDV

Query:  IFSE--------------------DESWNWND-----------DVDEAKSPFHV----------------------------------------------
         F E                    + S  W+                   P H                                               
Subjt:  IFSE--------------------DESWNWND-----------DVDEAKSPFHV----------------------------------------------

Query:  ------------------NINENEVAQELEQAKIQAVESSSSS----TSSSTSNDEISPRRM-----RSIQEIYNNTNRI------------------NV
                          N   NE   +L Q+     +SSSSS    TS+S+S+   +P  +       + +I NN N+                   N 
Subjt:  ------------------NINENEVAQELEQAKIQAVESSSSS----TSSSTSNDEISPRRM-----RSIQEIYNNTNRI------------------NV

Query:  DHFANFALFAGVGPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELM-ELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVT
         +    +L A   P T  +A++DE+W+ AM  EI+A   N TW+L+   P++   +G +W++  K  SDG++  YKARLV KGY Q  G+DY E F+PV 
Subjt:  DHFANFALFAGVGPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELM-ELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVT

Query:  RIETIRLILSLAAQNGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKY
        +  +IR++L +A    W + Q+D+ +AFL G L D+++++QP G++ +     V KL+KALYGLKQAPRAWY  + ++ L  GF     + +L+V +   
Subjt:  RIETIRLILSLAAQNGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKY

Query:  GKFLIVSL-YVDDLLFIGNDKFLCDDFKNSMKKEF
        GK ++  L YVDD+L  GND  L  +  +++ + F
Subjt:  GKFLIVSL-YVDDLLFIGNDKFLCDDFKNSMKKEF

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.5e-7128.79Show/hide
Query:  RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIMEMARSMLKA
        RY++ F+D F+R  W+Y LK+KS+    F  FK+  EN+   +I TL SD GGE++V  ++  + GI H  +   T + NG++ERK+R I+EM  ++L  
Subjt:  RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIMEMARSMLKA

Query:  KNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVSRKIIINRDV
         ++P  +W  A +  VY++NR PT  +   +P++    + P+   LKVF    Y  +    R KL+DKS++C  +GY+    AY   +  + ++  +R V
Subjt:  KNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVSRKIIINRDV

Query:  IFSE--------------------DESWNWNDDVDEAKSPF----------HVNINENEVAQELEQAKIQAVESS--SSSTSSSTSNDEISP--------
         F E                    D + NW        +P           H++ +    +        Q   S+  SSS SS +S++  +P        
Subjt:  IFSE--------------------DESWNWNDDVDEAKSPF----------HVNINENEVAQELEQAKIQAVESS--SSSTSSSTSNDEISP--------

Query:  ------RRMRSIQEIYNNTN----------------------------------------------------------------RINVDHFANFA-----
              +   S   I NN N                                                                 +N    A  A     
Subjt:  ------RRMRSIQEIYNNTN----------------------------------------------------------------RINVDHFANFA-----

Query:  -----------LFAGVGPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELM-ELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIF
                   L A   P T  +A++D++W+ AM  EI+A   N TW+L+   P +   +G +W++  K  SDG++  YKARLV KGY Q  G+DY E F
Subjt:  -----------LFAGVGPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELM-ELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIF

Query:  APVTRIETIRLILSLAAQNGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVK
        +PV +  +IR++L +A    W + Q+D+ +AFL G L DE++++QP G+V +   + V +L+KA+YGLKQAPRAWY  + ++ L  GF     + +L+V 
Subjt:  APVTRIETIRLILSLAAQNGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVK

Query:  EDKYGKFLIVSL-YVDDLLFIGNDKFLCDDFKNSMKKEF
        +   G+ +I  L YVDD+L  GND  L     +++ + F
Subjt:  EDKYGKFLIVSL-YVDDLLFIGNDKFLCDDFKNSMKKEF

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.1e-4541.07Show/hide
Query:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ
        P T++EA +   W  AMD EI A+    TWE+  LP NK+ +G KWVY+ K  SDG +E YKARLV KGY Q+ G+D+ E F+PV ++ +++LIL+++A 
Subjt:  PVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQ

Query:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEE----EKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYV
          + +HQ+DI +AFLNG L +EI++  P GY  R  +      V  LKK++YGLKQA R W+ +     +  GF +   +H  ++K      FL V +YV
Subjt:  NGWKVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEE----EKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYV

Query:  DDLLFIGNDKFLCDDFKNSMKKEF
        DD++   N+    D+ K+ +K  F
Subjt:  DDLLFIGNDKFLCDDFKNSMKKEF

ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.7e-0937.65Show/hide
Query:  NRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEK
        NRTI+E  RSML    LP  F  DA    V+I+N+ P+ ++    P E W    P+ S+L+ F  +AY H      GKL  +++K
Subjt:  NRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEK

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)4.1e-2142.37Show/hide
Query:  NRINVDHFANFALFAGVGPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIF
        N++N  +           P +   A++D  W  AM +E+DA+ RN+TW L+  P N+  LG KWV++TKL SDG ++  KARLV KG+ QE G+ + E +
Subjt:  NRINVDHFANFALFAGVGPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIF

Query:  APVTRIETIRLILSLAAQ
        +PV R  TIR IL++A Q
Subjt:  APVTRIETIRLILSLAAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAACAACAACAAATGGAGGTAATCGATATTTCATAACCTTCATCGATGATTTCAGTAGAAAGTTGTGGATTTATTTTTTGAAAGAAAAGAGTGAAGCACTT
GTATGTTTTAAATCCTTCAAAGCTTTTACTGAAAATCAAAGTGGTTACAAGATAAAAACTTTGAGATCTGACCGTGGTGGAGAATATATAGTTTTTGGTAATTTC
TTCAAGGAGCAAGGAATTCATCATCAAATGACAGCTCGAATGACTACACAGCAAAATGGAGTTGCAGAGAGAAAAAATAGAACAATCATGGAAATGGCGAGAAGT
ATGCTAAAAGCAAAAAATCTGCCAAACGAATTTTGGGGAGATGCTGTTGCATGTACTGTTTACATTCTAAATCGAGCTCCAACAAAGAGTGTTCCAGGTATGACT
CCTTATGAAGCATGGTGTGATGAGAAACCATCTGTTAGTCATTTGAAAGTGTTTAGGAGTATAGCTTATTCTCATATTCCAAATCAGCTAAGAGGCAAGCTTGAT
GATAAATCTGAAAAATGCATTATGGTAGGTTATAATGAAAATTCTAAAGCTTATCGATTGTATAATCCTGTGTCAAGAAAAATTATTATCAACAGAGATGTGATT
TTCAGTGAAGATGAATCATGGAACTGGAATGACGACGTTGATGAAGCTAAAAGTCCATTTCATGTTAATATTAATGAAAATGAAGTTGCTCAAGAATTAGAGCAA
GCGAAAATTCAAGCGGTGGAGTCATCTTCGTCCTCAACGTCATCTTCCACAAGTAATGATGAAATCTCACCAAGGAGAATGAGGAGTATTCAAGAAATTTATAAT
AACACTAACAGGATTAATGTTGATCATTTTGCTAATTTTGCATTATTTGCTGGTGTTGGTCCTGTAACTTTTGATGAAGCCATCCAAGATGAGAAATGGAAGATT
GCAATGGATCAAGAGATTGATGCGATAAGAAGAAATGAAACATGGGAGTTGATGGAGCTTCCGACAAACAAACAAGCGCTTGGAGTAAAATGGGTGTACAGAACA
AAGTTGAAGTCAGATGGTAATGTTGAAATATACAAGGCAAGACTTGTTGTAAAAGGCTACAAGCAGGAATATGGTGTGGATTATGAAGAAATATTTGCCCCTGTG
ACAAGAATTGAGACCATTCGATTGATTTTGTCATTAGCTGCTCAAAATGGATGGAAAGTTCATCAAATGGATATAAAATCCGCTTTTTTGAATGGACACTTGAAG
GACGAGATATTTGTTGCACAACCTTTGGGTTATGTGCAAAGGGGAGAAGAAGAAAAAGTGTACAAGTTGAAAAAAGCTTTGTATGGATTGAAGCAAGCTCCACGA
GCTTGGTACAGTCGTATCGACAGCTTTTTTCTAAAGACAGGATTTCGAAGGTGTCCATATGAGCATGCACTCTATGTCAAAGAAGACAAGTATGGCAAATTTCTC
ATCGTTTCTCTTTACGTTGATGATTTACTTTTTATTGGAAATGATAAATTTTTGTGTGATGATTTTAAGAATTCCATGAAAAAGGAATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGAACAACAACAAATGGAGGTAATCGATATTTCATAACCTTCATCGATGATTTCAGTAGAAAGTTGTGGATTTATTTTTTGAAAGAAAAGAGTGAAGCACTT
GTATGTTTTAAATCCTTCAAAGCTTTTACTGAAAATCAAAGTGGTTACAAGATAAAAACTTTGAGATCTGACCGTGGTGGAGAATATATAGTTTTTGGTAATTTC
TTCAAGGAGCAAGGAATTCATCATCAAATGACAGCTCGAATGACTACACAGCAAAATGGAGTTGCAGAGAGAAAAAATAGAACAATCATGGAAATGGCGAGAAGT
ATGCTAAAAGCAAAAAATCTGCCAAACGAATTTTGGGGAGATGCTGTTGCATGTACTGTTTACATTCTAAATCGAGCTCCAACAAAGAGTGTTCCAGGTATGACT
CCTTATGAAGCATGGTGTGATGAGAAACCATCTGTTAGTCATTTGAAAGTGTTTAGGAGTATAGCTTATTCTCATATTCCAAATCAGCTAAGAGGCAAGCTTGAT
GATAAATCTGAAAAATGCATTATGGTAGGTTATAATGAAAATTCTAAAGCTTATCGATTGTATAATCCTGTGTCAAGAAAAATTATTATCAACAGAGATGTGATT
TTCAGTGAAGATGAATCATGGAACTGGAATGACGACGTTGATGAAGCTAAAAGTCCATTTCATGTTAATATTAATGAAAATGAAGTTGCTCAAGAATTAGAGCAA
GCGAAAATTCAAGCGGTGGAGTCATCTTCGTCCTCAACGTCATCTTCCACAAGTAATGATGAAATCTCACCAAGGAGAATGAGGAGTATTCAAGAAATTTATAAT
AACACTAACAGGATTAATGTTGATCATTTTGCTAATTTTGCATTATTTGCTGGTGTTGGTCCTGTAACTTTTGATGAAGCCATCCAAGATGAGAAATGGAAGATT
GCAATGGATCAAGAGATTGATGCGATAAGAAGAAATGAAACATGGGAGTTGATGGAGCTTCCGACAAACAAACAAGCGCTTGGAGTAAAATGGGTGTACAGAACA
AAGTTGAAGTCAGATGGTAATGTTGAAATATACAAGGCAAGACTTGTTGTAAAAGGCTACAAGCAGGAATATGGTGTGGATTATGAAGAAATATTTGCCCCTGTG
ACAAGAATTGAGACCATTCGATTGATTTTGTCATTAGCTGCTCAAAATGGATGGAAAGTTCATCAAATGGATATAAAATCCGCTTTTTTGAATGGACACTTGAAG
GACGAGATATTTGTTGCACAACCTTTGGGTTATGTGCAAAGGGGAGAAGAAGAAAAAGTGTACAAGTTGAAAAAAGCTTTGTATGGATTGAAGCAAGCTCCACGA
GCTTGGTACAGTCGTATCGACAGCTTTTTTCTAAAGACAGGATTTCGAAGGTGTCCATATGAGCATGCACTCTATGTCAAAGAAGACAAGTATGGCAAATTTCTC
ATCGTTTCTCTTTACGTTGATGATTTACTTTTTATTGGAAATGATAAATTTTTGTGTGATGATTTTAAGAATTCCATGAAAAAGGAATTCTAG
Protein sequenceShow/hide protein sequence
MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHHQMTARMTTQQNGVAERKNRTIMEMARS
MLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVSRKIIINRDVI
FSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVGPVTFDEAIQDEKWKI
AMDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQNGWKVHQMDIKSAFLNGHLK
DEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFIGNDKFLCDDFKNSMKKEF