; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc05g0143251 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0143251
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationCMiso1.1chr05:26963752..26964717
RNA-Seq ExpressionCmc05g0143251
SyntenyCmc05g0143251
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063601.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa]4.7e-5397.96Show/hide
Query:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        MTASVFCATWDANKPLNWRKHYGWTAFCG VGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLD+NGNGFARGHLIVDYHFVNC
Subjt:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

TYK18426.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa]4.7e-5397.96Show/hide
Query:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        MTASVFCATWDANKPLNWRKHYGWTAFCG VGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLD+NGNGFARGHLIVDYHFVNC
Subjt:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

XP_004139241.1 pathogenesis-related protein PR-4 [Cucumis sativus]7.0e-4990.82Show/hide
Query:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        MTASVFC+TWDANKPLNWRKHYGWTAFCG VGP+GR+SCGRCLRVRNTETGDEETVRIVDQCSNGGLDLD+ VF+KLD NGNGFARGHLIVDY FVNC
Subjt:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

XP_008456038.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]3.3e-54100Show/hide
Query:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
Subjt:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

XP_038891021.1 pathogenesis-related protein PR-4-like [Benincasa hispida]3.5e-4888.78Show/hide
Query:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        +TASV+CATWDANKPLNWR HYGWTAFCG  GPTGRDSCG CLRVRNTETGDEETVRIVDQCSNGGLDLDY VF+KLD NGNGFA GHL+VDYHFVNC
Subjt:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LJA9 Barwin domain-containing protein3.4e-4990.82Show/hide
Query:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        MTASVFC+TWDANKPLNWRKHYGWTAFCG VGP+GR+SCGRCLRVRNTETGDEETVRIVDQCSNGGLDLD+ VF+KLD NGNGFARGHLIVDY FVNC
Subjt:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

A0A1S3C2E2 pathogenesis-related protein PR-4-like1.6e-54100Show/hide
Query:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
Subjt:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

A0A5A7VCZ9 Pathogenesis-related protein PR-4-like2.3e-5397.96Show/hide
Query:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        MTASVFCATWDANKPLNWRKHYGWTAFCG VGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLD+NGNGFARGHLIVDYHFVNC
Subjt:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

A0A5D3D4G1 Pathogenesis-related protein PR-4-like2.3e-5397.96Show/hide
Query:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        MTASVFCATWDANKPLNWRKHYGWTAFCG VGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLD+NGNGFARGHLIVDYHFVNC
Subjt:  MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

I3SZI9 Barwin domain-containing protein2.2e-4077.08Show/hide
Query:  ASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        ASV+CATWDAN+PL WRK YGWTAFCG  GP GRDSCG+CLRV+NT TG +ETVRIVDQC+NGGLDLD DVFK++D NG G+ +GHLIVDY FVNC
Subjt:  ASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN11.1e-3972.63Show/hide
Query:  SVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        S +C+TWDANKPL+WRK YGWTAFCG VGP GRDSCG+CLRV NT TG + TVRIVDQCSNGGLDLD +VF+++D +GNG  +GHLIV+Y FV+C
Subjt:  SVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

P29062 Pathogenesis-related protein PR-4A4.0e-3972.92Show/hide
Query:  ASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        AS FCATWDA+KPL WR+ YGWTAFCG  GP G+DSCGRCLRV NT TG + TVRIVDQCSNGGLDLD +VF +LD NG G+ +GHL V+Y FVNC
Subjt:  ASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

P29063 Pathogenesis-related protein PR-4B1.1e-3973.96Show/hide
Query:  ASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        AS FCATWDA+KPL WR+ YGWTAFCG  GP G+DSCGRCLRV NT TG + TVRIVDQCSNGGLDLD +VF +LD NG G+ +GHLIV+Y FVNC
Subjt:  ASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

P32045 Pathogenesis-related protein P21.1e-3973.2Show/hide
Query:  TASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        TASV+CATWDA+KPL WR+ YGWTAFCG  GPTG+ SCGRCLRV NT TG +ETVRIVDQC NGGLDLD +VF +LD NG G+ RG+L V+Y FVNC
Subjt:  TASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

P83343 Pathogenesis-related protein PR-4 (Fragment)6.2e-4074.23Show/hide
Query:  TASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        TASVFCATWDA+KPL+WR  YGWTAFCG VGPTG+DSCG+CL V NT TG + TVRIVDQCSNGGLDLD +VF ++D NG G A+GHLIV+Y FV+C
Subjt:  TASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 41.6e-3564.21Show/hide
Query:  SVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC
        S +C+TWDA+KP  WR  YGWTAFCG  GP G+ SCG+CLRV+NT T    TVRIVDQCSNGGLDLD  +F ++D +G G+ +GHLIVDY FV+C
Subjt:  SVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGCCAGTGTGTTTTGTGCAACTTGGGATGCTAATAAGCCCTTGAATTGGCGTAAACACTACGGTTGGACTGCCTTTTGCGGCTCCGTCGGTCCGACTGGCCGAGA
TTCTTGCGGTCGATGCCTTAGGGTGAGAAACACAGAAACTGGAGATGAAGAAACAGTAAGAATTGTGGATCAATGCAGCAACGGTGGGTTAGATTTGGACTATGATGTTT
TCAAAAAATTGGACAATAATGGAAATGGCTTTGCTCGTGGTCATCTTATAGTTGATTACCACTTTGTTAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
AAGAAAAGAATGAAGAGAGGAAGTTTGATTGTTTTTGCTTTGGCCTTGTGAGCAAGCCTTCTTGGCAGTGGCAAGGGCCAAAGCGCAAGCAATGTGATAGCAACCTATAA
TTTTTACAATCCTCAAACCATAGGCTGGAATTATATGACAGCCAGTGTGTTTTGTGCAACTTGGGATGCTAATAAGCCCTTGAATTGGCGTAAACACTACGGTTGGACTG
CCTTTTGCGGCTCCGTCGGTCCGACTGGCCGAGATTCTTGCGGTCGATGCCTTAGGGTGAGAAACACAGAAACTGGAGATGAAGAAACAGTAAGAATTGTGGATCAATGC
AGCAACGGTGGGTTAGATTTGGACTATGATGTTTTCAAAAAATTGGACAATAATGGAAATGGCTTTGCTCGTGGTCATCTTATAGTTGATTACCACTTTGTTAATTGCTA
A
Protein sequenceShow/hide protein sequence
MTASVFCATWDANKPLNWRKHYGWTAFCGSVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKKLDNNGNGFARGHLIVDYHFVNC