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Cmc05g0143261 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0143261
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBarwin domain-containing protein
Genome locationCMiso1.1chr05:26967602..26968311
RNA-Seq ExpressionCmc05g0143261
SyntenyCmc05g0143261
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063600.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa]4.0e-5077.93Show/hide
Query:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ
        METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWD    L       W       G        L    LVTNVQ G Q
Subjt:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ

Query:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
Subjt:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

KAE8651558.1 hypothetical protein Csa_019464 [Cucumis sativus]7.3e-4474.81Show/hide
Query:  MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WNGVANMDGLPFVALLDLMAK------TLVTNVQIGAQETVRIVDQCS
        MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWD    L W   +      F   L  + +       LVTNVQ GAQ+TVRIVDQCS
Subjt:  MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WNGVANMDGLPFVALLDLMAK------TLVTNVQIGAQETVRIVDQCS

Query:  NGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        NGGLDLDVGVFQSLDTDGNG ANGFLT+NYDFVNC
Subjt:  NGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

KAG6599313.1 Wound-induced protein WIN1, partial [Cucurbita argyrosperma subsp. sororia]6.4e-4064.83Show/hide
Query:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ
        MET+ ++  + L C CLVM+SKAQS SNVRATFNLYNAP+INWD NAVSAFCSTWD    L       W       G        L    LVTN + GAQ
Subjt:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ

Query:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        +TVRIVDQC+NGGLDLDVGVF+SLDTDGNGNANGFLTV+YDFVNC
Subjt:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

XP_004139240.1 pathogenesis-related protein PR-4 [Cucumis sativus]2.4e-4773.79Show/hide
Query:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WNGVANMDGLPFVALLDLMAK------TLVTNVQIGAQ
        ME +S+V+FVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWD    L W   +      F   L  + +       LVTNVQ GAQ
Subjt:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WNGVANMDGLPFVALLDLMAK------TLVTNVQIGAQ

Query:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        +TVRIVDQCSNGGLDLDVGVFQSLDTDGNG ANGFLT+NYDFVNC
Subjt:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

XP_022946139.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]8.4e-4065.52Show/hide
Query:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ
        MET+ ++  + L C CLVM+SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWD    L       W       G        L    LVTN + GAQ
Subjt:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ

Query:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        + VRIVDQC+NGGLDLDVGVFQSLDTDGNGNANGFLTV+YDFVNC
Subjt:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LG74 Barwin domain-containing protein2.6e-3973.02Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WNGVANMDGLPFVALLDLMAK------TLVTNVQIGAQETVRIVDQCSNGGLDLDVG
        MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWD    L W   +      F   L  + +       LVTNVQ GAQ+TVRIVDQCSNGGLDLDVG
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WNGVANMDGLPFVALLDLMAK------TLVTNVQIGAQETVRIVDQCSNGGLDLDVG

Query:  VFQSLDTDGNGNANGFLTVNYDFVNC
        VFQSLDTDGNG ANGFLT+NYDFVNC
Subjt:  VFQSLDTDGNGNANGFLTVNYDFVNC

A0A5D3D4F5 Pathogenesis-related protein PR-4-like1.9e-5077.93Show/hide
Query:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ
        METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWD    L       W       G        L    LVTNVQ G Q
Subjt:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ

Query:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
Subjt:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

A0A6J1CMK0 pathogenesis-related protein PR-4-like2.0e-3965.52Show/hide
Query:  METRS--MVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WN---GVANMDGLPFVALLDLMAK-TLVTNVQIGAQ
        MET+S  M+  +ML C  ++ +S+ QSGSNVRAT+NLYNAPQINWDLNAVSAFC+TWD    L W    G     G       D   +  LVTN + GAQ
Subjt:  METRS--MVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WN---GVANMDGLPFVALLDLMAK-TLVTNVQIGAQ

Query:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        +TVRIVDQCSNGGLDLDVGVFQSLDT+GNGNANGFLTVNYDFVNC
Subjt:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

A0A6J1G2Y5 pathogenesis-related protein PR-4-like4.1e-4065.52Show/hide
Query:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ
        MET+ ++  + L C CLVM+SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWD    L       W       G        L    LVTN + GAQ
Subjt:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ

Query:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        + VRIVDQC+NGGLDLDVGVFQSLDTDGNGNANGFLTV+YDFVNC
Subjt:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

A0A6J1KG47 pathogenesis-related protein PR-4-like9.0e-4064.83Show/hide
Query:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ
        MET+ ++  + L C CLVM+SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWD    L       W       G        L    LVTN + GAQ
Subjt:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ

Query:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        +TVRIVDQC+NGGLDLDVGVFQSLDTDGNGNANGFL V+YDFV C
Subjt:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN11.3e-2757.14Show/hide
Query:  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WN---GVANMDGLPFVALLDLMAKTL-VTNVQIGAQETVRIVDQCSNGGLDLDVGVFQSLDT
        S  NVRAT+++YN   + WDLNAVSA+CSTWD    L W    G     G       D   K L VTN + GAQ TVRIVDQCSNGGLDLDV VF+ +DT
Subjt:  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WN---GVANMDGLPFVALLDLMAKTL-VTNVQIGAQETVRIVDQCSNGGLDLDVGVFQSLDT

Query:  DGNGNANGFLTVNYDFVNC
        DGNGN  G L VNY FV+C
Subjt:  DGNGNANGFLTVNYDFVNC

P09762 Wound-induced protein WIN23.8e-2756.3Show/hide
Query:  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDM-QINLWN---GVANMDGLPFVALLDLMAKTL-VTNVQIGAQETVRIVDQCSNGGLDLDVGVFQSLDT
        S  NVRAT+++YN   + WDLNAVSA+CSTWD  +   W    G     G       D   K L VTN + GAQ TVRIVDQCSNGGLDLD+ VFQ +DT
Subjt:  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDM-QINLWN---GVANMDGLPFVALLDLMAKTL-VTNVQIGAQETVRIVDQCSNGGLDLDVGVFQSLDT

Query:  DGNGNANGFLTVNYDFVNC
        DG GN  G L VNY FVNC
Subjt:  DGNGNANGFLTVNYDFVNC

P29062 Pathogenesis-related protein PR-4A1.3e-2753.38Show/hide
Query:  MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WN---GVANMDGLPFVALLDLMAKTL-VTNVQIGAQETVRIVDQCSNG
        +L+ S ++ M+ AQS +NVR+T++LYN   INWDL A SAFC+TWD    L W    G     G       D   + L VTN   G Q TVRIVDQCSNG
Subjt:  MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WN---GVANMDGLPFVALLDLMAKTL-VTNVQIGAQETVRIVDQCSNG

Query:  GLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        GLDLDV VF  LDT+G G   G LTVNY+FVNC
Subjt:  GLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

P29063 Pathogenesis-related protein PR-4B5.0e-2752.63Show/hide
Query:  MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WN---GVANMDGLPFVALLDLMAKTL-VTNVQIGAQETVRIVDQCSNG
        +L+ S ++ M+ AQS +NVR+T++LYN   INWDL A SAFC+TWD    L W    G     G       D   + L VTN   G Q TVRIVDQCSNG
Subjt:  MLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-WN---GVANMDGLPFVALLDLMAKTL-VTNVQIGAQETVRIVDQCSNG

Query:  GLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        GLDLDV VF  LDT+G G   G L VNY+FVNC
Subjt:  GLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

P32045 Pathogenesis-related protein P27.9e-2544.83Show/hide
Query:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ
        ME  + +     + + ++ ++ AQS +NVRAT++LYN   INWDL   S +C+TWD    L       W       G    A      +  VTN   G Q
Subjt:  METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQ

Query:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        ETVRIVDQC NGGLDLDV VF  LDT+G G   G L VNY+FVNC
Subjt:  ETVRIVDQCSNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 42.6e-2348.36Show/hide
Query:  QSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQETVRIVDQCSNGGLDLDVGVFQS
        +S SNVRAT++ YN  Q NWDL AVSA+CSTWD            W       G    A      +  V N +  A  TVRIVDQCSNGGLDLDV +F  
Subjt:  QSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINL-------WNGVANMDGLPFVALLDLMAKTLVTNVQIGAQETVRIVDQCSNGGLDLDVGVFQS

Query:  LDTDGNGNANGFLTVNYDFVNC
        +DTDG G   G L V+Y FV+C
Subjt:  LDTDGNGNANGFLTVNYDFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACAAGAAGTATGGTGACGTTTGTAATGTTGTTGTGTTCATGTCTTGTAATGATGTCCAAAGCTCAAAGTGGGAGTAACGTTAGAGCAACATTTAACTTA
TACAATGCTCCACAAATCAATTGGGATTTGAATGCTGTGAGTGCATTTTGTTCAACTTGGGATATGCAAATAAACCTTTGGAATGGCGTAGCCAATATGGATGGA
CTGCCTTTTGTGGCCCTGTTGGACCTCATGGCCAAGACTCTTGTGACTAATGTTCAAATAGGAGCTCAAGAAACAGTGAGAATTGTAGATCAATGTAGTAATGGA
GGGTTAGATTTGGACGTTGGAGTGTTTCAAAGTCTCGACACCGATGGAAATGGCAATGCTAATGGCTTTCTCACAGTGAACTATGATTTTGTGAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACAAGAAGTATGGTGACGTTTGTAATGTTGTTGTGTTCATGTCTTGTAATGATGTCCAAAGCTCAAAGTGGGAGTAACGTTAGAGCAACATTTAACTTA
TACAATGCTCCACAAATCAATTGGGATTTGAATGCTGTGAGTGCATTTTGTTCAACTTGGGATATGCAAATAAACCTTTGGAATGGCGTAGCCAATATGGATGGA
CTGCCTTTTGTGGCCCTGTTGGACCTCATGGCCAAGACTCTTGTGACTAATGTTCAAATAGGAGCTCAAGAAACAGTGAGAATTGTAGATCAATGTAGTAATGGA
GGGTTAGATTTGGACGTTGGAGTGTTTCAAAGTCTCGACACCGATGGAAATGGCAATGCTAATGGCTTTCTCACAGTGAACTATGATTTTGTGAATTGTTGA
Protein sequenceShow/hide protein sequence
METRSMVTFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDMQINLWNGVANMDGLPFVALLDLMAKTLVTNVQIGAQETVRIVDQCSNG
GLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC