CuGenDBv2

Gene ID	Cmc05g0144351
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Genome location	CMiso1.1chr05:27662823..27667816
RNA-Seq Expression	Cmc05g0144351
Synteny	Cmc05g0144351
Gene Ontology terms	NA
InterPro domains	IPR019188 - Small nuclear RNA activating complex (SNAPc), subunit SNAP43

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0063525.1 putative mediator of RNA polymerase II transcription subunit 26 isoform X1 [Cucumis melo var. makuwa]

2.3e-153

98.94

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELV+DAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV
        KKLALY ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDV+FDKELERMLTDV
Subjt:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV

KAE8651536.1 hypothetical protein Csa_019424 [Cucumis sativus]

6.5e-148

95.77

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHM S ASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELV+DAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAY KLFNDTPI NYIHMDLGMEVGSN+LTKMSTDYSEA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV
        KKLALY ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQ +PVEADQQLLEDH DV+FDKELERMLTDV
Subjt:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV

XP_008457139.1 PREDICTED: uncharacterized protein LOC103496883 isoform X1 [Cucumis melo]

4.7e-154

99.65

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV
        KKLALY ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV
Subjt:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV

XP_008457155.1 PREDICTED: uncharacterized protein LOC103496883 isoform X2 [Cucumis melo]

1.9e-155

100

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV
        KKLALYASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV
Subjt:  KKLALYASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV

XP_031737111.1 uncharacterized protein LOC101216308 isoform X1 [Cucumis sativus]

6.5e-148

95.77

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHM S ASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELV+DAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAY KLFNDTPI NYIHMDLGMEVGSN+LTKMSTDYSEA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV
        KKLALY ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQ +PVEADQQLLEDH DV+FDKELERMLTDV
Subjt:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LL25 Uncharacterized protein

3.2e-148

95.77

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHM S ASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELV+DAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAY KLFNDTPI NYIHMDLGMEVGSN+LTKMSTDYSEA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV
        KKLALY ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQ +PVEADQQLLEDH DV+FDKELERMLTDV
Subjt:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV

A0A1S3C4E1 uncharacterized protein LOC103496883 isoform X1

2.3e-154

99.65

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV
        KKLALY ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV
Subjt:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV

A0A1S3C4X9 uncharacterized protein LOC103496883 isoform X2

9.2e-156

100

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALYASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV
        KKLALYASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV
Subjt:  KKLALYASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV

A0A5A7VCA1 Putative mediator of RNA polymerase II transcription subunit 26 isoform X1

1.1e-153

98.94

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELV+DAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV
        KKLALY ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDV+FDKELERMLTDV
Subjt:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV

A0A6J1CN36 uncharacterized protein LOC111013003

1.3e-125

82.17

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPFRLDIDELI E+AE G+TSF DMK VW GRKFTYIFEAAPS NLAFFMQS++AQSI HM   ASL  RLGG YCLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        ELKKLKELV+DAKE NVKV S V KRMLEKNMFLFGSVDMNES+ALETVNQLTELQNAR+QVAYNKLF+DTPIE+YIHMDLGMEVG N+L KMSTDYSEA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEA--DQQLLEDHTDVDFDKELERMLTDV
        KKLALY AS I+DVQDIKHI+ED++LIGDTVE+IAE+WNVQRGVFYEQTGLD+QL+PVEA  + QLL  H D +FDKELERMLTD+
Subjt:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEA--DQQLLEDHTDVDFDKELERMLTDV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G53270.1 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

9.0e-79

52.08

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        EL K ++LV++AK+  V++ + V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVDFDKELERMLT
        KK A+  A +I+++ DIKHI+E+++L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE D+       D  FD EL+R+L+
Subjt:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVDFDKELERMLT

AT3G53270.2 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

9.0e-79

52.08

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        EL K ++LV++AK+  V++ + V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVDFDKELERMLT
        KK A+  A +I+++ DIKHI+E+++L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE D+       D  FD EL+R+L+
Subjt:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVDFDKELERMLT

AT3G53270.3 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

9.0e-79

52.08

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        EL K ++LV++AK+  V++ + V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVDFDKELERMLT
        KK A+  A +I+++ DIKHI+E+++L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE D+       D  FD EL+R+L+
Subjt:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVDFDKELERMLT

AT3G53270.4 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

9.0e-79

52.08

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        EL K ++LV++AK+  V++ + V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVDFDKELERMLT
        KK A+  A +I+++ DIKHI+E+++L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE D+       D  FD EL+R+L+
Subjt:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVDFDKELERMLT

AT3G53270.5 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

9.0e-79

52.08

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Query:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P++NLAFFMQS++  +I HM S  S   RLGGLYCLYCL+E QPF+P ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIG

Query:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA
        EL K ++LV++AK+  V++ + V K+ML++NM +FG+VD  E++A +T++QLTELQNARV+ AY KL  DT I  +IH+D+G EV  N L KMS +Y+EA
Subjt:  ELKKLKELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEA

Query:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVDFDKELERMLT
        KK A+  A +I+++ DIKHI+E+++L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE D+       D  FD EL+R+L+
Subjt:  KKLALY-ASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLIPVEADQQLLEDHTDVDFDKELERMLT

Sequences

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CDS sequence

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ATGGATCTCTCTCCATTCAGGCTTGATATTGATGAGTTGATCAATGAATTTGCAGAGTGTGGATTCACATCTTTTGGTGATATGAAGAAAGTATGGATTGGAAGA
AAATTCACTTACATATTTGAGGCTGCTCCTTCTACCAACTTGGCCTTCTTTATGCAATCAATCTTTGCCCAATCAATTAGTCACATGCGCAGTGCTGCTTCTTTG
CCACACAGATTAGGTGGCCTTTATTGCCTTTACTGCCTTTATGAGACACAGCCCTTTAGACCCCCTTACAAAATCTACCTGTCTATTGGAGAGTTGAAGAAACTG
AAGGAACTTGTTATTGATGCAAAAGAAAATAATGTAAAAGTGGTATCTTTTGTGGTGAAAAGAATGTTAGAAAAGAACATGTTTCTCTTTGGATCTGTGGACATG
AATGAGAGTGCTGCTTTGGAAACGGTGAATCAACTAACAGAATTGCAAAATGCTCGCGTTCAAGTAGCCTATAATAAGTTGTTTAATGATACTCCAATTGAAAAT
TATATCCATATGGACTTGGGGATGGAAGTTGGTTCAAATTTATTAACAAAGATGTCAACAGATTATTCAGAGGCCAAGAAACTTGCATTATATGCAAGTAAGATA
GTGGATGTTCAGGACATAAAGCACATAGCAGAAGATGAGAAATTGATTGGAGATACGGTTGAAAAGATTGCTGAGGACTGGAACGTTCAGAGAGGAGTTTTTTAT
GAACAAACCGGACTCGACCAACAGCTTATTCCAGTCGAGGCAGACCAGCAGTTACTTGAAGATCACACCGATGTAGATTTTGATAAGGAACTCGAAAGAATGCTA
ACTGATGTTTAA

mRNA sequence

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TGATTCAAGCCTTATTATCACCCTAGGCTCTCAAATTCAAAATCTAATTCTTTATTTATTGATTCAGTGGAGCCCTAGGAAAGAAGGAAACTTCCAATTTTCGTT
CGTTGTCCGAAGACCTCCCTCCTAAAACTCTCCGGTGGGGCCTTTCTCATAGATGGAAGATTCCCCATTCATTGAAAAAGGTAACCCCAGAGTTTTTTGACGAAG
GTTAGGCCCGATTAGGCGAGGTCGAGTCACTTCGTCCCTCTCCCCGATAGTTGACTTTGACCTATCGCGGAGTGGGCAACTGAGAGCTAACCTAGATTCTTCCCT
CAATGAAAGTTTAGAGACTAAAGTCGACGAAATTATTATTATTATTATTATATTTTTTTTGGTAGCAGAATCGGCTATTCCAAAAAAATCCCCAACCATCCCAGG
GAAGTATTTCCAATTACTATGCATTGAGGTGATGTTCTTTTACTAACTCACATAAAACTCAGAAATTTGTGGATGCAATGGATCTCTCTCCATTCAGGCTTGATA
TTGATGAGTTGATCAATGAATTTGCAGAGTGTGGATTCACATCTTTTGGTGATATGAAGAAAGTATGGATTGGAAGAAAATTCACTTACATATTTGAGGCTGCTC
CTTCTACCAACTTGGCCTTCTTTATGCAATCAATCTTTGCCCAATCAATTAGTCACATGCGCAGTGCTGCTTCTTTGCCACACAGATTAGGTGGCCTTTATTGCC
TTTACTGCCTTTATGAGACACAGCCCTTTAGACCCCCTTACAAAATCTACCTGTCTATTGGAGAGTTGAAGAAACTGAAGGAACTTGTTATTGATGCAAAAGAAA
ATAATGTAAAAGTGGTATCTTTTGTGGTGAAAAGAATGTTAGAAAAGAACATGTTTCTCTTTGGATCTGTGGACATGAATGAGAGTGCTGCTTTGGAAACGGTGA
ATCAACTAACAGAATTGCAAAATGCTCGCGTTCAAGTAGCCTATAATAAGTTGTTTAATGATACTCCAATTGAAAATTATATCCATATGGACTTGGGGATGGAAG
TTGGTTCAAATTTATTAACAAAGATGTCAACAGATTATTCAGAGGCCAAGAAACTTGCATTATATGCAAGTAAGATAGTGGATGTTCAGGACATAAAGCACATAG
CAGAAGATGAGAAATTGATTGGAGATACGGTTGAAAAGATTGCTGAGGACTGGAACGTTCAGAGAGGAGTTTTTTATGAACAAACCGGACTCGACCAACAGCTTA
TTCCAGTCGAGGCAGACCAGCAGTTACTTGAAGATCACACCGATGTAGATTTTGATAAGGAACTCGAAAGAATGCTAACTGATGTTTAAACAAGGTATCTCCACT
GAAAACCGACTCCAATCTAGAACATCGCTGAATGGTAACGAATAGTTATCAGAAATGATCACTGGAACACAACCGCCATAGATGGCTTCCACCACCCTCGGGCTT
GCCACTTCATAGCCACTAGGGCAGAGACAAAACTTGCTTTCTCCAATCAATTTGGTGTAATTTTGGGTCTTAGGAAGGTATTCATGAACTTGAACTTCATTGTCC
TTTTCCTTCCAATGCTTGATCAAAATCTTCCTGATGTATCCATGAGCTCCTCCAGCGAAGAAAGCTAGAATTGGGCGGCGTTCTGGTGGCTGGCCTAAGTCCGGT
GGCCCTAACGTTCCAGGGTGGATGTTGATTTCTGGGAGTGGAATATCTATGTTGGGACGAAAGCCTTCTGTGATGTTCGCATTGCACACTACCCTGATGAAGTTC
TTGAACAGTTGGGGGTTGGCATCTGAGATTTCTGGTGCCTTGAAATCACCGTTAGAAGTTAGGAGGAAGCGTTAGAAAAAGAAGAAACAAAGATTTGATAACTTG
TAGAATCTTAATTCTTACCCAATCATGGCATGAAACCACAAAATGATCAGCACCATTGCTTCGGTTCCAATATGGATACCTGTTGGCAACAACTCGAATGTAATC
AGTTGTCACACGGTGCATCCGATCACGGCTGTAGTCAGTAGGAGAAGTGATTGGCCTATAAATGAAATGAATGATGTTGGTGATACTCAAGGGAAGAAGAAATAC
ATGAGCTTGATCAGGATGGCTGGCTCTAAAAGGACTCTTGCTGCAATCTAACTCATCTATAAATTGGCCTTCAATGGCATATATGCTATTCAATGGACCGTCATG
GAACAGAGGCTGTTCTCCTTCTCTATAACTCCATACCTTGAACCTCTTGACCATTTCTATGTGGCTTCTGCATAACATTTTGGATATACTGTAAAGGAAAACTCA
ACTGATGAAAAGCATAAGGATTTCTGTAAATGGGGCCTCTGGGAATGTAAGTTTCTTTCTTCTCTGATGTGAAGTTTTTCCACAGAACTGCCTTTCGGATGGACG
CTCGAGCTTCAGCCAAGCTTGCTTCAATCATCTTCAAATTCATCTTCTTCTTCTGCTCCATAAACCTCAAAATGAAAACTGAAAAAAAGAAAATTTGACTACAGC
AAAAACACTAAAGAAAGAAAGGAGAGCCTTTTTTTTGTCCATTCTTACTTTGATGATTATAGCTTTCATGGGTTTGTTGCCTTCTCTCATGGAGTTTATGGGAAA
GATAGAAGAAGCTAATGGAAAAGCTTTAGTTGCTTGTGACAGGTCCAACAATGGTGGAACAGAAAAAAACTGAAGGTAAAAAAGAAGAAGAAGACTTGTTGGCAG
TAGCAAGCAATAGAGACGGCAGCTGAAGCTTGCCATGGCCAAACTCTTCCTTTCAAGCTCTTTCTCTTAGCTTTTTTTCCTTTTTTAAGTGCTAAATGAAAGAGA
AACTGAAGAGATTGCCAGTAGAAAAAGGTTTGAATTTCGTCATTGTTCCTCCAAAATCGATGTAATTGAATTCAAAAGAGTTATTAATTAATGCATTTTGTTGAA
TACTATGGTGCAAACGTTGCTTGGAAAAAGTGATGCTTGTAGACACCGGTACCTTAATTATAATTTTCTTGAGTTCTTAGATTTAAAACCTTGGTTTAATGTAAT
TTATAAATTTACGATTATCTAGTTGT

Protein sequence

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MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQSISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIGELKKL
KELVIDAKENNVKVVSFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMDLGMEVGSNLLTKMSTDYSEAKKLALYASKI
VDVQDIKHIAEDEKLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLIPVEADQQLLEDHTDVDFDKELERMLTDV

Cmc05g0144351 (gene) of Melon (Charmono) v1.1 genome