CuGenDBv2

Gene ID	Cmc06g0148961
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protein PAIR1 isoform X1
Genome location	CMiso1.1chr06:1100184..1112635
RNA-Seq Expression	Cmc06g0148961
Synteny	Cmc06g0148961
Gene Ontology terms	GO:0048236 - plant-type sporogenesis (biological process) GO:0070192 - chromosome organization involved in meiotic cell cycle (biological process)
InterPro domains	IPR034546 - Protein PAIR1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134325.2 putative recombination initiation defects 3 [Cucumis sativus]

2.5e-209

94.65

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQA QLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPP+SYSKED Q
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ

Query:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
        LG+SKSSTSLTQKWRPSPL DSKCQVGEELDRRLGTIENS+NKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKML+NSS LQSMNKDHDDMKAIIDGG
Subjt:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMI TLK PLQKFPPHSIQSPE  ACLDVPKQK+ RCKIQSA+PNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ

Query:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSE-QQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQ
        AT VQKEEVGMWKSVKVGKAFCTSSVV RDDPNKVIPFSE QQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDV YYSIEEAK+ET+RILRKARRQ
Subjt:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSE-QQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQ

Query:  KRKYSNPIIIN
        KRKYSN IIIN
Subjt:  KRKYSNPIIIN

XP_008438046.1 PREDICTED: protein PAIR1 isoform X1 [Cucumis melo]

9.9e-222

99.76

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ

Query:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
        LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
Subjt:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ

Query:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSE-QQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQ
        ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSE QQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQ
Subjt:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSE-QQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQ

Query:  KRKYSNPIIIN
        KRKYSNPIIIN
Subjt:  KRKYSNPIIIN

XP_008438047.1 PREDICTED: protein PAIR1 isoform X2 [Cucumis melo]

4.0e-223

100

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ

Query:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
        LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
Subjt:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ

Query:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK
        ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK
Subjt:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK

Query:  RKYSNPIIIN
        RKYSNPIIIN
Subjt:  RKYSNPIIIN

XP_008438048.1 PREDICTED: protein PAIR1 isoform X3 [Cucumis melo]

3.8e-221

99.76

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ

Query:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
        LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
Subjt:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ

Query:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK
        ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK
Subjt:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK

Query:  RKYSNPIIIN
        RKYSNPIIIN
Subjt:  RKYSNPIIIN

XP_038882627.1 putative recombination initiation defects 3 isoform X1 [Benincasa hispida]

5.7e-201

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Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
        MRLKINKACDLSSISVLPP SRR NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYS+EDCQ
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ

Query:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
        L LSKSSTSLTQ+W+P+PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQ+SLDVE IWQKMLVNSS LQSMNKDHDDMKA +DGG
Subjt:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
        FKLIS+QLKKDAYQERL+EIS+ LSSLEKQVQASQLKLKNDFISTFT+E+KAM+ TLK PLQKFPPHSIQSPE TACLDVP+QKRHRCKIQSASPNVC +
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ

Query:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK
        AT VQKEEVG WKSVKVGK FCT SV  +DDP KVIPFSEQQ LVLEREYRVIVDSDEEIERSFSCLIEEKKTG+DVRYYSIE+AK+E+ARILRKARRQK
Subjt:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK

Query:  RKYSNPIIIN
        RKY NPIIIN
Subjt:  RKYSNPIIIN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AV35 protein PAIR1 isoform X2

1.9e-223

100

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ

Query:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
        LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
Subjt:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ

Query:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK
        ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK
Subjt:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK

Query:  RKYSNPIIIN
        RKYSNPIIIN
Subjt:  RKYSNPIIIN

A0A1S3AVJ5 protein PAIR1 isoform X3

1.8e-221

99.76

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ

Query:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
        LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
Subjt:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ

Query:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK
        ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK
Subjt:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK

Query:  RKYSNPIIIN
        RKYSNPIIIN
Subjt:  RKYSNPIIIN

A0A1S4DSK1 protein PAIR1 isoform X1

4.8e-222

99.76

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
        MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ

Query:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
        LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
Subjt:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
        FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ

Query:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSE-QQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQ
        ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSE QQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQ
Subjt:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSE-QQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQ

Query:  KRKYSNPIIIN
        KRKYSNPIIIN
Subjt:  KRKYSNPIIIN

A0A6J1FTV4 protein PAIR1 isoform X2

2.8e-185

84.63

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
        MRLKINKACDLSSISVLPPQSR  NALTTGQQAPQLRSQPSQQSFSQGLSS HG  SQ SQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYS+E+CQ
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ

Query:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
        L LSKSSTSLTQ+W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL  DIL LN+GMKQ+SLDVE IWQK++VNSSLLQSMNK+HDDMK+ +DGG
Subjt:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
        FKLISDQLKKDAYQERLHEISD LS+LEKQVQASQLKL+NDFISTFT+EMKAM+ TLKKPLQKFP   I+SPE TA LDVP+QKR RCKIQSASP+VC +
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ

Query:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK
        ATAVQ EEVG WKSVKVGK FCTS+V  ++D  K IPFSEQ+ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+DVR+YSIE+AK+ET RILRKARRQK
Subjt:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK

Query:  RKYSNPIIIN
        RKY NPIIIN
Subjt:  RKYSNPIIIN

A0A6J1FY69 protein PAIR1 isoform X1

1.9e-186

84.63

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ
        MRLKINKACDLSSISVLPPQS R NALTTGQQAPQLRSQPSQQSFSQGLSS HG  SQ SQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYS+E+CQ
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQ

Query:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG
        L LSKSSTSLTQ+W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL  DIL LN+GMKQ+SLDVE IWQK++VNSSLLQSMNK+HDDMK+ +DGG
Subjt:  LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGG

Query:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ
        FKLISDQLKKDAYQERLHEISD LS+LEKQVQASQLKL+NDFISTFT+EMKAM+ TLKKPLQKFP   I+SPE TA LDVP+QKR RCKIQSASP+VC +
Subjt:  FKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQ

Query:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK
        ATAVQ EEVG WKSVKVGK FCTS+V  ++D  K IPFSEQ+ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+DVR+YSIE+AK+ET RILRKARRQK
Subjt:  ATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQK

Query:  RKYSNPIIIN
        RKY NPIIIN
Subjt:  RKYSNPIIIN

SwissProt top hits

e value

%identity

Alignment

Q0WWX5 Putative recombination initiation defects 3

3.0e-64

36.62

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSK
        M++ INKACDL SISV PP  RR       Q + QLRSQ SQQSFSQG SS     G +SQ++Q+S DE++ N+QRFSSQ+R+ S+KK +S  PP+++ +
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSK

Query:  EDCQLGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAI
        ED QL  S+SS+ L+++W  + + +SK Q+ EEL++R G +E SL++FG +LDS+ SDI+Q N+G K+V L+ E I QK+ +  + LQ + K+  D KA 
Subjt:  EDCQLGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAI

Query:  IDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMIS-TLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSA--
        +DGG K I ++  KD  QE+L +I   L+++ +QV+ +  K++ +   TFT+E++ + S    +P  + P     +P+  A  ++P+Q+    K+ ++  
Subjt:  IDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMIS-TLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSA--

Query:  --SPNVCTQATAVQKE-----------------------------------------------EVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCL
           P V   A    KE                                               +VG WK+VK  K+        +   ++      +QC 
Subjt:  --SPNVCTQATAVQKE-----------------------------------------------EVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCL

Query:  VLEREYRVIVDSDEE-IERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQKRKYSNPIIIN
               V++DSDEE I+  FSCLI E   G +  +    +A++ET RILR ARR KRK+ NPIIIN
Subjt:  VLEREYRVIVDSDEE-IERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQKRKYSNPIIIN

Q75RY2 Protein PAIR1

7.8e-28

36.81

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Query:  MRLKINKACDLSSISVLPPQ--SRRLNALTTGQQAPQLRSQP-------SQQSFSQGLSSQ--HGMYSQLSQNSFDEVV-------TNEQRFSSQDRENS
        M+LK+NKACD++SISVLPP+       A  +G  A  + SQP       SQQSFSQG S+   H   SQ SQ S D+ +       T +QRF   D  +S
Subjt:  MRLKINKACDLSSISVLPPQ--SRRLNALTTGQQAPQLRSQP-------SQQSFSQGLSSQ--HGMYSQLSQNSFDEVV-------TNEQRFSSQDRENS

Query:  IKKNSFFPPLSYS--KEDCQLGLSKSSTSLTQKWRPSPLTDSKCQV-GEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVN
         K+ S  P  S S  +E+ QL L+K  ++   +W PS       QV  E+++R+   + +S++K G ++DS+ SD++QLN+ MK+ SLD  SI QK+ V 
Subjt:  IKKNSFFPPLSYS--KEDCQLGLSKSSTSLTQKWRPSPLTDSKCQV-GEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVN

Query:  SSLLQSMNKDHDDMKAIIDGGFKLISDQLK-KDAYQERLHEISDFLSSLEKQVQASQLKLKNDFI----STFTKEMKAMISTLKKPLQ
         S LQ + K  DD+KA+     K   DQ    ++   +L+EIS  L++L+ Q+QA QL+     +    ++ + E+ + ++TL+  +Q
Subjt:  SSLLQSMNKDHDDMKAIIDGGFKLISDQLK-KDAYQERLHEISDFLSSLEKQVQASQLKLKNDFI----STFTKEMKAMISTLKKPLQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G01690.1 putative recombination initiation defects 3

2.2e-65

36.62

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSK
        M++ INKACDL SISV PP  RR       Q + QLRSQ SQQSFSQG SS     G +SQ++Q+S DE++ N+QRFSSQ+R+ S+KK +S  PP+++ +
Subjt:  MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSK

Query:  EDCQLGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAI
        ED QL  S+SS+ L+++W  + + +SK Q+ EEL++R G +E SL++FG +LDS+ SDI+Q N+G K+V L+ E I QK+ +  + LQ + K+  D KA 
Subjt:  EDCQLGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAI

Query:  IDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMIS-TLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSA--
        +DGG K I ++  KD  QE+L +I   L+++ +QV+ +  K++ +   TFT+E++ + S    +P  + P     +P+  A  ++P+Q+    K+ ++  
Subjt:  IDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMIS-TLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSA--

Query:  --SPNVCTQATAVQKE-----------------------------------------------EVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCL
           P V   A    KE                                               +VG WK+VK  K+        +   ++      +QC 
Subjt:  --SPNVCTQATAVQKE-----------------------------------------------EVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCL

Query:  VLEREYRVIVDSDEE-IERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQKRKYSNPIIIN
               V++DSDEE I+  FSCLI E   G +  +    +A++ET RILR ARR KRK+ NPIIIN
Subjt:  VLEREYRVIVDSDEE-IERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQKRKYSNPIIIN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAGTCCAGAAGGTTAAATGCGTTAACGACTGGGCAGCAAGCACCACAGTTGCG
ATCACAACCTTCGCAACAATCCTTTTCTCAGGGATTGTCGTCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGAT
TTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCTTTTTTTCCTCCTCTAAGTTACTCCAAAGAAGATTGTCAATTGGGACTCTCAAAATCTTCAACCAGTTTA
ACACAAAAATGGAGACCTAGTCCTCTTACGGATTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAGAT
CTTGGATTCTCTTCTCAGTGACATCTTACAACTAAACAAAGGAATGAAGCAAGTTTCTCTGGATGTGGAAAGCATATGGCAAAAGATGCTTGTTAACAGTAGCTTGCTGC
AATCCATGAACAAAGACCACGATGACATGAAAGCTATCATCGATGGAGGCTTCAAATTGATATCCGATCAACTTAAGAAGGATGCATACCAAGAAAGGCTGCATGAGATT
TCCGATTTTCTTTCTTCATTGGAAAAGCAAGTACAAGCGTCTCAACTTAAATTAAAAAATGACTTCATCAGCACATTCACCAAAGAAATGAAGGCAATGATCTCTACCTT
GAAGAAACCCTTGCAAAAATTTCCACCTCACTCTATTCAATCTCCCGAGCGTACAGCATGTTTGGATGTTCCAAAGCAGAAGCGACATCGATGTAAAATTCAATCTGCGT
CTCCAAATGTTTGCACTCAAGCAACTGCAGTACAAAAGGAGGAAGTAGGAATGTGGAAATCAGTAAAAGTGGGAAAGGCGTTTTGCACTAGTAGTGTGGTGACAAGGGAT
GATCCAAATAAAGTAATTCCATTTTCTGAACAGCAGTGCCTGGTGCTAGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCCT
AATTGAAGAGAAGAAAACAGGAAAAGATGTACGTTACTATTCCATAGAAGAGGCCAAGCAAGAAACTGCCAGAATTTTAAGGAAAGCAAGAAGGCAGAAAAGAAAATACA
GCAATCCTATAATTATTAATTGA

mRNA sequence

Show/hide mRNA sequence

GTTCTCTTCATACTACTTATTCCCATATTTTGTCATTTGAGCTTTAACAACCTTCAAGCTTGGAAATCCTTCTCATTTCAATACTGCAAGCAAAACAATATAGTTGGTTG
CGATTGATCCACAATCGTTCTTTCATAGCTCGATTACGCTGGCAGTTTCGATCGACCAGTCGAAGAGTATTTGGCTTCTCAGTCCTCGCTCAGAGAGCGTTTCTATCAAA
TGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAGTCCAGAAGGTTAAATGCGTTAACGACTGGGCAGCAAGCACCACAGTTGCGA
TCACAACCTTCGCAACAATCCTTTTCTCAGGGATTGTCGTCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATT
TAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCTTTTTTTCCTCCTCTAAGTTACTCCAAAGAAGATTGTCAATTGGGACTCTCAAAATCTTCAACCAGTTTAA
CACAAAAATGGAGACCTAGTCCTCTTACGGATTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAGATC
TTGGATTCTCTTCTCAGTGACATCTTACAACTAAACAAAGGAATGAAGCAAGTTTCTCTGGATGTGGAAAGCATATGGCAAAAGATGCTTGTTAACAGTAGCTTGCTGCA
ATCCATGAACAAAGACCACGATGACATGAAAGCTATCATCGATGGAGGCTTCAAATTGATATCCGATCAACTTAAGAAGGATGCATACCAAGAAAGGCTGCATGAGATTT
CCGATTTTCTTTCTTCATTGGAAAAGCAAGTACAAGCGTCTCAACTTAAATTAAAAAATGACTTCATCAGCACATTCACCAAAGAAATGAAGGCAATGATCTCTACCTTG
AAGAAACCCTTGCAAAAATTTCCACCTCACTCTATTCAATCTCCCGAGCGTACAGCATGTTTGGATGTTCCAAAGCAGAAGCGACATCGATGTAAAATTCAATCTGCGTC
TCCAAATGTTTGCACTCAAGCAACTGCAGTACAAAAGGAGGAAGTAGGAATGTGGAAATCAGTAAAAGTGGGAAAGGCGTTTTGCACTAGTAGTGTGGTGACAAGGGATG
ATCCAAATAAAGTAATTCCATTTTCTGAACAGCAGTGCCTGGTGCTAGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCCTA
ATTGAAGAGAAGAAAACAGGAAAAGATGTACGTTACTATTCCATAGAAGAGGCCAAGCAAGAAACTGCCAGAATTTTAAGGAAAGCAAGAAGGCAGAAAAGAAAATACAG
CAATCCTATAATTATTAATTGAAGGTGCAAGATGGGTCAGAACGATCAGTATGTAGAGAAGCCTTTCTTCTAGGGTTTGGCTTGAAAGTTCCATAATGTAATATCAAAAA
TCTATCATTAATGGGGAACCCAATGCCTTGACGCAAGTGCCTACCAACCCACCCCACATAAAAGAAAAAAAGGTTTGGCTCTCTCAGCTGGATCCATGAGATCCTAAGCT
TCATTATTTTCTGCTTCTCTCTGCATTTTCTCAATGGAATATTTTAGAATTTCTTTTATGGATTTTGCTTTTGAAATATACTGTTTGTTCTTTCTTCTTTTCCCCCAACT
TTGTATACAAAAAGAAACATAGGATATAAGTTTAGGTGAGTTTTGATTACTTGGAAAAACTACATTTTTAGTCCTATTTTTTAAAACAGGTATGTTGGTTTTCTGAATTT
TCTAAACATACTTTTTTTATCTATAAACTTTTTAGATTTGGT

Protein sequence

Show/hide protein sequence

MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSL
TQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEI
SDFLSSLEKQVQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKIQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCTSSVVTRD
DPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGKDVRYYSIEEAKQETARILRKARRQKRKYSNPIIIN

Cmc06g0148961 (gene) of Melon (Charmono) v1.1 genome