; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0155341 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0155341
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionE3 ubiquitin-protein ligase RBBP6 isoform X2
Genome locationCMiso1.1chr06:4646795..4648212
RNA-Seq ExpressionCmc06g0155341
SyntenyCmc06g0155341
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134201.1 uncharacterized protein LOC101221899 isoform X2 [Cucumis sativus]2.1e-6895.36Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPK
        EASFDEGESMNS PKKQKKKNKKKKNKNKKNKRQKIVEDSECGVG  P  K
Subjt:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPK

XP_008438870.1 PREDICTED: uncharacterized protein LOC103483832 [Cucumis melo]4.4e-7499.35Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS
        EASFDEGESMNS PKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS
Subjt:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS

XP_022956119.1 uncharacterized protein LOC111457905 isoform X2 [Cucurbita moschata]1.5e-5886.45Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKK-KKNKN---KKNKRQKIVEDSECGVGKNPNPK
        EASFD+GE+MNS PKKQK KNKK KKNKN   KKNKRQKIVEDS CGVGK P  K
Subjt:  EASFDEGESMNSVPKKQKKKNKK-KKNKN---KKNKRQKIVEDSECGVGKNPNPK

XP_022979960.1 uncharacterized protein LOC111479494 [Cucurbita maxima]5.8e-5886.18Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE
        MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDPE
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE

Query:  ASFDEGESMNSVPKKQKKKNK--KKKNKNKKNKRQKIVEDSECGVGKNPNPK
        ASFD+GE+MNS PKKQK KNK  KK  K KKNKRQKIVEDS CGVGK P  K
Subjt:  ASFDEGESMNSVPKKQKKKNK--KKKNKNKKNKRQKIVEDSECGVGKNPNPK

XP_031739377.1 uncharacterized protein LOC101221899 isoform X1 [Cucumis sativus]5.1e-6297.06Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKI
        EASFDEGESMNS PKKQKKKNKKKKNKNKKNKRQK+
Subjt:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKI

TrEMBL top hitse value%identityAlignment
A0A0A0LAK0 Uncharacterized protein1.0e-6895.36Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPK
        EASFDEGESMNS PKKQKKKNKKKKNKNKKNKRQKIVEDSECGVG  P  K
Subjt:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPK

A0A1S3AY37 uncharacterized protein LOC1034838322.1e-7499.35Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS
        EASFDEGESMNS PKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS
Subjt:  EASFDEGESMNSVPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS

A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X11.8e-5785.9Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKK-KKNKN---KKNKRQ-KIVEDSECGVGKNPNPK
        EASFD+GE+MNS PKKQK KNKK KKNKN   KKNKRQ KIVEDS CGVGK P  K
Subjt:  EASFDEGESMNSVPKKQKKKNKK-KKNKN---KKNKRQ-KIVEDSECGVGKNPNPK

A0A6J1GY51 uncharacterized protein LOC111457905 isoform X27.4e-5986.45Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDP

Query:  EASFDEGESMNSVPKKQKKKNKK-KKNKN---KKNKRQKIVEDSECGVGKNPNPK
        EASFD+GE+MNS PKKQK KNKK KKNKN   KKNKRQKIVEDS CGVGK P  K
Subjt:  EASFDEGESMNSVPKKQKKKNKK-KKNKN---KKNKRQKIVEDSECGVGKNPNPK

A0A6J1IUT6 uncharacterized protein LOC1114794942.8e-5886.18Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE
        MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHVDTFDDPE
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVDTFDDPE

Query:  ASFDEGESMNSVPKKQKKKNK--KKKNKNKKNKRQKIVEDSECGVGKNPNPK
        ASFD+GE+MNS PKKQK KNK  KK  K KKNKRQKIVEDS CGVGK P  K
Subjt:  ASFDEGESMNSVPKKQKKKNK--KKKNKNKKNKRQKIVEDSECGVGKNPNPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18540.1 unknown protein1.7e-3156.88Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS  PRLAHPGGPLKTNKAAALAKFL RKL QDPN  +SI+P +++LAV+NAK +V      SSG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF

Query:  DDPEASFDEGESMNS-VPKKQKKKNKKKKNKNKKNK-----RQKIVEDSECGVGKNPNPK
        +D E S D+ +  N+ + KK+KKKN KKK + KK K     +Q+I  D +  + K PN K
Subjt:  DDPEASFDEGESMNS-VPKKQKKKNKKKKNKNKKNK-----RQKIVEDSECGVGKNPNPK

AT5G18540.2 unknown protein9.0e-3358.86Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS  PRLAHPGGPLKTNKAAALAKFL RKL QDPN  +SI+P +++LAV+NAK +V      SSG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVDTF

Query:  DDPEASFDEGESMNS-VPKKQKKKNKKKK---NKNKKNKRQKIVEDSECGVGKNPNPK
        +D E S D+ +  N+ + KK+KKKN KKK    K KKNK+ KI  D +  + K PN K
Subjt:  DDPEASFDEGESMNS-VPKKQKKKNKKKK---NKNKKNKRQKIVEDSECGVGKNPNPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATGGAAGATCTTACCGAAGAAGAAAGACGTGCTCTACGAGGAAGCAAGTTCGCTCCTCTCCCATCGCAATCCACTTCTTCTCGATCTCACCCAAGGTTGGCTCA
TCCAGGTGGACCATTGAAAACCAACAAAGCCGCGGCTCTCGCTAAGTTTCTTCACCGGAAATTGCACCAAGATCCTAATGCTTTCTCTTCTATTAATCCCCAGATTTTGG
ACCTTGCTGTTCGAAATGCCAAAGCCTCTGTTCATTCCAGTGGTACAAATATTCGGCATGTGGACACATTTGATGACCCTGAGGCTTCTTTTGATGAAGGGGAATCTATG
AATTCTGTGCCTAAAAAACAAAAGAAAAAGAACAAGAAGAAGAAAAATAAAAATAAGAAGAACAAAAGGCAAAAGATTGTTGAGGACTCCGAGTGTGGCGTTGGAAAAAA
CCCAAACCCAAAAAGAAGTTGA
mRNA sequenceShow/hide mRNA sequence
GACAAAACGACTTTCCTTTCCATCCCCCAAAGAGAAGAAAGGAAGCGACGGACGACGTCGTAAGATCTGCACAAAGCAAAAAGAGAACAGAATTTAAATTTCTGAGAGAA
TCAAAAACAAAAAAATAGAGAAAATCCATAGCCAATGGTGATGGAAGATCTTACCGAAGAAGAAAGACGTGCTCTACGAGGAAGCAAGTTCGCTCCTCTCCCATCGCAAT
CCACTTCTTCTCGATCTCACCCAAGGTTGGCTCATCCAGGTGGACCATTGAAAACCAACAAAGCCGCGGCTCTCGCTAAGTTTCTTCACCGGAAATTGCACCAAGATCCT
AATGCTTTCTCTTCTATTAATCCCCAGATTTTGGACCTTGCTGTTCGAAATGCCAAAGCCTCTGTTCATTCCAGTGGTACAAATATTCGGCATGTGGACACATTTGATGA
CCCTGAGGCTTCTTTTGATGAAGGGGAATCTATGAATTCTGTGCCTAAAAAACAAAAGAAAAAGAACAAGAAGAAGAAAAATAAAAATAAGAAGAACAAAAGGCAAAAGA
TTGTTGAGGACTCCGAGTGTGGCGTTGGAAAAAACCCAAACCCAAAAAGAAGTTGAGATTGTGAGCTGAAAGGAAAGGAAACAGAGCTGGAGATAATCAGTTTTCAGAAG
ATTGGAGAGTTAACTTGAAAGGATGAACCTTTTTTTGGAAGCAAGGCAGCTAGTAAGCCATACAGGGTTGCTGTTCCTGATGTTTTTGAACGAGAACTATAAAGTCTCAC
ATTCACGAGTCTAAAACAATTTGATTTCTCTAGTGAAAGAATGATGTTTAGCTTCTCTTACTCATGTTGCAACATTCTTTTGTTTTGTTGGCAAATAGCAACTTTCTTTA
AATCCAATGACCTGAATTCGATTTTTCATATGAGAAATATTTTCCATATGTATCATTCATGGCTTCTATCACTTAATGCCACTTCTACTCATTTGACAAACTCAGTGTTT
ACTACTATCCTTG
Protein sequenceShow/hide protein sequence
MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVDTFDDPEASFDEGESM
NSVPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNPNPKRS