CuGenDBv2

Gene ID	Cmc06g0155401
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Transcription termination factor MTEF1
Genome location	CMiso1.1chr06:4679601..4680698
RNA-Seq Expression	Cmc06g0155401
Synteny	Cmc06g0155401
Gene Ontology terms	GO:0006353 - DNA-templated transcription, termination (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domains	IPR003690 - Transcription termination factor, mitochondrial/chloroplastic IPR038538 - MTERF superfamily, mitochondrial/chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0049463.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa]

1.1e-158

83.1

Show/hide

Query:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL
        M NLFRR +LLR  SS FSHGFSECPLK LRYLSTSS+IVSSP SA LASNA+Q KN  KA++ALLA+HGFSESQISD+ KR  +IL  NPEK L PKLL
Subjt:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL

Query:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEIVKLVCS P VLTGSL+KRIIP FDY+QAV GSEEKTL +IK+FAGIL  DLRIS GPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
Subjt:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL
        RFKE VERV EMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEI +AFR+ P  M  SEDKING MDFFVNK+GCE+SFAARRPILLSLSL
Subjt:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL

Query:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLEL
        KKRILPRGY+YQVLLSKGLIKKH+NL  FFES E  FIEKFINPH EQI GLLEL
Subjt:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLEL

KAA0049478.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa]

7.3e-200

99.72

Show/hide

Query:  RRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSK
        RRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSK
Subjt:  RRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSK

Query:  GLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEA
        GLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEA
Subjt:  GLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEA

Query:  VERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRIL
        VERVKEMGFNPQQLQFVVAVFILRAMT+STWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRIL
Subjt:  VERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRIL

Query:  PRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR
        PRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR
Subjt:  PRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR

XP_016898974.1 PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo]

4.1e-203

100

Show/hide

Query:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL
        MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL
Subjt:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL

Query:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
Subjt:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL
        RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL
Subjt:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL

Query:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR
        KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR
Subjt:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR

XP_016898975.1 PREDICTED: uncharacterized protein LOC103483824 [Cucumis melo]

9.3e-163

83.29

Show/hide

Query:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL
        MS LFRRILLLRSPSS FSHGFSEC LK LR+LSTSSEIVSSPKSASLASNA        ALVALLANHGFSESQISDI KRQ KIL LNP+KILSPKLL
Subjt:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL

Query:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAV GSEEKTL TIK+FAGIL  DLRISVGPNIEILKQIGV DSNI KYLQYQPR+FLIN +
Subjt:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL
        RFKE VERV EMGFNP +LQFVVAVF LR+MTKSTWDKKVEVYRKWGLSEEE  +AFR++PLCMAFSEDKIN VMDFFVNK+G ESSF ARRP L+S SL
Subjt:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL

Query:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR
        KKRILPRGY+YQVLLSKGLIKKH++   FFE  EKRFIEK INPH EQI GLLELY++K+ D RR
Subjt:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR

XP_016899002.1 PREDICTED: uncharacterized protein LOC103483819 isoform X2 [Cucumis melo]

1.9e-160

80.27

Show/hide

Query:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL
        MSNLFRRILLLRSPSS FSHGFSECPLK LR+LSTSSEIVSSPKSASLASN VQ+KNN KA  +   NHGFSESQISDI K+  +IL  NPEKIL PKLL
Subjt:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL

Query:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEIVKLVC  P  L  SLNKR+IP FDY+QAVFGS+EK L  IK+FAGIL +DL+I VGPNIEILKQIGVPDSNIFKYLQY+PRVFL NP+
Subjt:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL
        RFKE VER  EMGFNPQQLQF+VAVFILR+M KSTWDKKVEVYRKWGLSEEEIR+AFRK P  M  SEDKIN  MDFFVNK+GCESS A  RP+LLSLSL
Subjt:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL

Query:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR
        KKRILPRGY+Y+VLLSKGLI+KH+NL  FFESPEKRFIEK INPH EQI GLLELYE+KL D RR
Subjt:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DSL0 uncharacterized protein LOC103483824

4.5e-163

83.29

Show/hide

Query:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL
        MS LFRRILLLRSPSS FSHGFSEC LK LR+LSTSSEIVSSPKSASLASNA        ALVALLANHGFSESQISDI KRQ KIL LNP+KILSPKLL
Subjt:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL

Query:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAV GSEEKTL TIK+FAGIL  DLRISVGPNIEILKQIGV DSNI KYLQYQPR+FLIN +
Subjt:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL
        RFKE VERV EMGFNP +LQFVVAVF LR+MTKSTWDKKVEVYRKWGLSEEE  +AFR++PLCMAFSEDKIN VMDFFVNK+G ESSF ARRP L+S SL
Subjt:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL

Query:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR
        KKRILPRGY+YQVLLSKGLIKKH++   FFE  EKRFIEK INPH EQI GLLELY++K+ D RR
Subjt:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR

A0A1S4DSL1 uncharacterized protein LOC103483826

2.0e-203

100

Show/hide

Query:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL
        MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL
Subjt:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL

Query:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
Subjt:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL
        RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL
Subjt:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL

Query:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR
        KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR
Subjt:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR

A0A1S4DSM8 uncharacterized protein LOC103483819 isoform X2

9.4e-161

80.27

Show/hide

Query:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL
        MSNLFRRILLLRSPSS FSHGFSECPLK LR+LSTSSEIVSSPKSASLASN VQ+KNN KA  +   NHGFSESQISDI K+  +IL  NPEKIL PKLL
Subjt:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL

Query:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEIVKLVC  P  L  SLNKR+IP FDY+QAVFGS+EK L  IK+FAGIL +DL+I VGPNIEILKQIGVPDSNIFKYLQY+PRVFL NP+
Subjt:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL
        RFKE VER  EMGFNPQQLQF+VAVFILR+M KSTWDKKVEVYRKWGLSEEEIR+AFRK P  M  SEDKIN  MDFFVNK+GCESS A  RP+LLSLSL
Subjt:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL

Query:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR
        KKRILPRGY+Y+VLLSKGLI+KH+NL  FFESPEKRFIEK INPH EQI GLLELYE+KL D RR
Subjt:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR

A0A5A7U0V4 Transcription termination factor MTEF1

5.1e-159

83.1

Show/hide

Query:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL
        M NLFRR +LLR  SS FSHGFSECPLK LRYLSTSS+IVSSP SA LASNA+Q KN  KA++ALLA+HGFSESQISD+ KR  +IL  NPEK L PKLL
Subjt:  MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL

Query:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEIVKLVCS P VLTGSL+KRIIP FDY+QAV GSEEKTL +IK+FAGIL  DLRIS GPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
Subjt:  FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL
        RFKE VERV EMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEI +AFR+ P  M  SEDKING MDFFVNK+GCE+SFAARRPILLSLSL
Subjt:  RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL

Query:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLEL
        KKRILPRGY+YQVLLSKGLIKKH+NL  FFES E  FIEKFINPH EQI GLLEL
Subjt:  KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLEL

A0A5D3CY08 Transcription termination factor MTEF1

3.5e-200

99.72

Show/hide

Query:  RRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSK
        RRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSK
Subjt:  RRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSK

Query:  GLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEA
        GLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEA
Subjt:  GLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEA

Query:  VERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRIL
        VERVKEMGFNPQQLQFVVAVFILRAMT+STWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRIL
Subjt:  VERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRIL

Query:  PRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR
        PRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR
Subjt:  PRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR

SwissProt top hits

e value

%identity

Alignment

Q9FM80 Transcription termination factor MTERF9, chloroplastic

2.4e-04

19.32

Show/hide

Query:  AVQLKNNPKA--LVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTL
        A ++  +PK   L+  L+  G  ES    + +R    L +N       +L +  S G+   +I +++   P +L  ++   +  +  +L  +     K  
Subjt:  AVQLKNNPKA--LVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTL

Query:  ITIKRFAGILAWDLRISVGPNIE-ILKQIGVPDSNIFKYLQYQPRVFL--INPVRFKEAVERVKEMGFNPQQLQFVVAVF--ILRAMTKSTWDKKVEVYR
          +     + ++ +  S+ P I  +++++G+ ++++ K +Q  P++ +  ++       +   KE+G     +  +V     +L       +  ++   R
Subjt:  ITIKRFAGILAWDLRISVGPNIE-ILKQIGVPDSNIFKYLQYQPRVFL--INPVRFKEAVERVKEMGFNPQQLQFVVAVF--ILRAMTKSTWDKKVEVYR

Query:  KWGLSEEEIRIAFRKSPLCMAFS-EDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPR
          G+   +I          ++ S ED +     + VN+L  E     + P+ LSLSL +RI PR
Subjt:  KWGLSEEEIRIAFRKSPLCMAFS-EDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPR

Arabidopsis top hits

e value

%identity

Alignment

AT1G21150.1 Mitochondrial transcription termination factor family protein

1.5e-49

33.65

Show/hide

Query:  SPKSASLASNAVQL--KNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQ
        S +SA   S  V+L     P +++AL  +HGF+  QI+ + K   ++L L+PE ++SPKL+FF S G S+ +  K++ S P +L+ SL+KR+IP +D L+
Subjt:  SPKSASLASNAVQL--KNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQ

Query:  AVFGSEEKTLITIKRFAGILAWDLRIS--VGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWD
        ++   EE  +  +KR  GI  + L+I+  V   + I +++GVPD +I   +Q  P  F     RF E + RV   GF+P++  FV A+      ++S  +
Subjt:  AVFGSEEKTLITIKRFAGILAWDLRIS--VGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWD

Query:  KKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHE-NLAWFFESPEKR
        +K ++++ +G S+E+   A  + P C+  S++KI   +++ VN +G ++     RP++LSLS++KRI PR  +  +LLSKGL+KK + N     +     
Subjt:  KKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHE-NLAWFFESPEKR

Query:  FIEKFINPHTEQISGLLE
        F++KF+  + +++  L++
Subjt:  FIEKFINPHTEQISGLLE

AT1G61970.1 Mitochondrial transcription termination factor family protein

2.8e-32

26.69

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Query:  KNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRF
        KNNP +++ LL +HGF+ SQIS I +   ++L  + EK L PKL F QS+G SS EI ++V S+P +L    +K I   +D+++      EK+    K  
Subjt:  KNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRF

Query:  AGILAWDLRISVGPNIEILKQIGVPDSNIFKYL--QYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEI
          +   +L   +  N+ +L+++G+P   +F  L    QP   +    +F+E +++V EMGF+P   +FV A+ ++  M + T ++KV +Y+  G    ++
Subjt:  AGILAWDLRISVGPNIEILKQIGVPDSNIFKYL--QYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEI

Query:  RIAFRKSPL-----------------------------------CMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKG
          +F+K P+                                   C+  S + +    +F V K+          P +   SL+KRI+PRG + + L+SKG
Subjt:  RIAFRKSPL-----------------------------------CMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKG

Query:  LIKKH-ENLAWFFESPEKRFIEKFINPHTEQ--ISGLLELY
        L++    +++      ++ F+ +++  H ++  ++ L+ +Y
Subjt:  LIKKH-ENLAWFFESPEKRFIEKFINPHTEQ--ISGLLELY

AT1G61970.2 Mitochondrial transcription termination factor family protein

2.8e-32

26.69

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Query:  KNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRF
        KNNP +++ LL +HGF+ SQIS I +   ++L  + EK L PKL F QS+G SS EI ++V S+P +L    +K I   +D+++      EK+    K  
Subjt:  KNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRF

Query:  AGILAWDLRISVGPNIEILKQIGVPDSNIFKYL--QYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEI
          +   +L   +  N+ +L+++G+P   +F  L    QP   +    +F+E +++V EMGF+P   +FV A+ ++  M + T ++KV +Y+  G    ++
Subjt:  AGILAWDLRISVGPNIEILKQIGVPDSNIFKYL--QYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEI

Query:  RIAFRKSPL-----------------------------------CMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKG
          +F+K P+                                   C+  S + +    +F V K+          P +   SL+KRI+PRG + + L+SKG
Subjt:  RIAFRKSPL-----------------------------------CMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKG

Query:  LIKKH-ENLAWFFESPEKRFIEKFINPHTEQ--ISGLLELY
        L++    +++      ++ F+ +++  H ++  ++ L+ +Y
Subjt:  LIKKH-ENLAWFFESPEKRFIEKFINPHTEQ--ISGLLELY

AT5G07900.1 Mitochondrial transcription termination factor family protein

2.5e-57

37.27

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Query:  LRYLSTSSEIVSSPKSASLASNAVQLKN--NPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSL
        L YL  S  +  SP SA++AS  + L +   P  ++ LL +HGF+ +QIS + K++  +L  N E +L PKL FF S G+S   + + + S P +LT SL
Subjt:  LRYLSTSSEIVSSPKSASLASNAVQLKN--NPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSL

Query:  NKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFI
          ++IP++++L++V  S+EK +  ++R   +   D   ++ PNI  + + GVP+  I   L + P   +     F+   ++ +EMGFNPQ+  FV+A+  
Subjt:  NKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFI

Query:  LRAM-TKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHENL
        L     KS WDK  EVY++WG SE++I  AF+K P CM  SE KIN  M++FVN++       A+ P++L  SL+KRI+PR  + +VL+S GL+K+  +L
Subjt:  LRAM-TKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHENL

Query:  AWFFESPEKRFIEKFINPHTEQISGLLELY
               EK F+EK +  + E++  L+ LY
Subjt:  AWFFESPEKRFIEKFINPHTEQISGLLELY

AT5G64950.1 Mitochondrial transcription termination factor family protein

4.3e-41

30.7

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Query:  PKSASLASNAVQLKN--NPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQA
        P + ++A     LK+   P++++ +L ++ FS++QI    +   +++  N EKIL PKL FF+  G +   + K V     V+  SL K++IP  + L++
Subjt:  PKSASLASNAVQLKN--NPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQA

Query:  VFGSEEKTLITIKRFAG--ILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDK
        +   + + L  I    G  +L+ D  + + PNI  L+  G+  S +   L+ QPR+F ++  + +  V R  ++GF       V AV  L ++++ T+D+
Subjt:  VFGSEEKTLITIKRFAG--ILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDK

Query:  KVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLI----KKHENLAWFFESPE
        KV+++   G SE+EI    R+SP  +  SEDK+    +F++ ++G E    A+RP +LS +L+KR++PR  + Q+L  KGL+    KK +N+    E  E
Subjt:  KVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLI----KKHENLAWFFESPE

Query:  KRFIEKFINPHTEQIS
        + F+EK++    ++I+
Subjt:  KRFIEKFINPHTEQIS

Sequences

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CDS sequence

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ATGTCTAACTTGTTTCGCAGAATCCTTCTACTTAGATCTCCATCGTCAGCCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATTTTTGAGATACTTATCTACCTCTTC
TGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGCTGTTCAGCTCAAGAATAATCCGAAGGCTCTTGTTGCGTTACTTGCGAATCATGGATTCTCTGAAT
CGCAAATCTCTGACATTACCAAGAGGCAGTCTAAAATTCTCTGTCTGAACCCCGAGAAAATCCTATCACCCAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCA
GAGATCGTCAAATTAGTGTGTTCAATTCCTTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCCTAATTTTGATTACCTTCAAGCCGTGTTTGGAAGTGAGGAGAA
GACTCTCATTACCATAAAGCGGTTTGCGGGTATTCTCGCTTGGGATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATA
TTTTCAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATCCCGTCCGATTCAAGGAGGCTGTAGAGAGAGTTAAGGAAATGGGATTCAACCCTCAACAATTGCAG
TTTGTTGTTGCTGTTTTTATTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTATAGCTTT
TAGAAAGAGTCCTTTGTGTATGGCATTTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACAAATTGGGATGCGAATCATCTTTCGCTGCTAGAAGACCAA
TTTTACTTTCACTTAGCTTGAAGAAGAGGATTTTGCCTAGAGGCTATATTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAACACGAGAATCTTGCTTGGTTCTTT
GAGTCTCCTGAAAAGCGTTTCATAGAAAAATTCATCAACCCTCATACAGAGCAGATTTCTGGATTGTTGGAGTTGTATGAAGAGAAATTAAAGGATTATAGAAGATGA

mRNA sequence

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Protein sequence

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MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSP
EIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQ
FVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHENLAWFF
ESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR

Cmc06g0155401 (gene) of Melon (Charmono) v1.1 genome