; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0155841 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0155841
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPectin lyase-like superfamily protein
Genome locationCMiso1.1chr06:4932813..4934027
RNA-Seq ExpressionCmc06g0155841
SyntenyCmc06g0155841
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049518.1 exopolygalacturonase-like [Cucumis melo var. makuwa]1.6e-15592.95Show/hide
Query:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM
        MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM
Subjt:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM

Query:  FAT-----------------SLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGS
        FAT                 SLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGS
Subjt:  FAT-----------------SLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGS

Query:  VNVSVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDSYM
        VNVSVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRE++  M
Subjt:  VNVSVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDSYM

XP_004134495.1 exopolygalacturonase [Cucumis sativus]2.6e-13787.1Show/hide
Query:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM
        MAAWEDACY++G SMLLIPEGNY VDQ+T SGPCF+DLSPKVLILGTLIAPTNLTADVWIHF SL RLSLTAGHLST+DG+GAQTWSSGS CR A+TC M
Subjt:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM

Query:  FATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGIS
        FA SLKLSNVLNGTVS+INLVDSK FHVSI QCDNIH SGFNITAPW SQNTDG HISQSTNI+ITNS IGVGDDCVSIGPGSVNV VSNVTCGPGHGIS
Subjt:  FATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGIS

Query:  IGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDS
        IGSLG+YKME DV GI VENCTI+GTQNGVRVKTWPGD  SNATNLTFQNIVMINVSNPIIIDQQYCPN SCD+RE  S
Subjt:  IGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDS

XP_016898978.1 PREDICTED: exopolygalacturonase-like [Cucumis melo]1.2e-15898.22Show/hide
Query:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM
        MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM
Subjt:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM

Query:  FATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGIS
        FATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNIN+TNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGIS
Subjt:  FATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGIS

Query:  IGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDSYM
        IGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRE++  M
Subjt:  IGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDSYM

XP_022979570.1 exopolygalacturonase-like [Cucurbita maxima]4.8e-11572.6Show/hide
Query:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTI-DGQGAQTWSSGSACRRALTCP
        M+AWE+AC  +G+S+ LIPEG +LV  +T SGPCF++LSPKVLI  TLIAPT LT DVWIHFHSL  L LT    ST+ +GQGAQTWS GSACR  +TCP
Subjt:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTI-DGQGAQTWSSGSACRRALTCP

Query:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI
        +F TSLKL+ V +  V NI+LVDSKGFHV++  CD+IH  GFNITAPWNSQNTDGIHIS STNIN+ NS+IGVGDDCVSIGPGS +V VSN+ CGPGHGI
Subjt:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI

Query:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDSY
        S+GSLG+YK E DVIGIRVENCTI+ TQNGVRVKTWPG+  SNA +LTFQNIVM NVSNPIIIDQ YCPNHSCDT+EV+ +
Subjt:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDSY

XP_038885913.1 exopolygalacturonase-like [Benincasa hispida]3.3e-12478.57Show/hide
Query:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTI-DGQGAQTWSSGSACRRALTCP
        M+AWEDAC   G SM+LIPEGN+ VDQ+T SGPCF+D+SPKVLILGTLIAPT+L  D WI F SL R  LT G  S I DGQGA TWSSGSACR  +TC 
Subjt:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTI-DGQGAQTWSSGSACRRALTCP

Query:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI
         FATSLKLSN+ NG V+NI LVDSKGFHVSI+ CDNIH SGFNITAPW+SQNTDGIHISQSTNI+IT S+IGVGDDCVS+GPG VNVS+S++ CGPGHGI
Subjt:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI

Query:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDS
        S+GSLGKYK E DV+GIRVENCTINGTQNGVRVKTWPGDL SNATNLTFQNIVMINVSNPIIIDQ YCPNHSCD +E  S
Subjt:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDS

TrEMBL top hitse value%identityAlignment
A0A0A0L932 Uncharacterized protein1.3e-13787.1Show/hide
Query:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM
        MAAWEDACY++G SMLLIPEGNY VDQ+T SGPCF+DLSPKVLILGTLIAPTNLTADVWIHF SL RLSLTAGHLST+DG+GAQTWSSGS CR A+TC M
Subjt:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM

Query:  FATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGIS
        FA SLKLSNVLNGTVS+INLVDSK FHVSI QCDNIH SGFNITAPW SQNTDG HISQSTNI+ITNS IGVGDDCVSIGPGSVNV VSNVTCGPGHGIS
Subjt:  FATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGIS

Query:  IGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDS
        IGSLG+YKME DV GI VENCTI+GTQNGVRVKTWPGD  SNATNLTFQNIVMINVSNPIIIDQQYCPN SCD+RE  S
Subjt:  IGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDS

A0A1S4DSN8 exopolygalacturonase-like5.9e-15998.22Show/hide
Query:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM
        MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM
Subjt:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM

Query:  FATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGIS
        FATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNIN+TNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGIS
Subjt:  FATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGIS

Query:  IGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDSYM
        IGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRE++  M
Subjt:  IGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDSYM

A0A5A7U2P8 Exopolygalacturonase-like7.9e-15692.95Show/hide
Query:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM
        MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM
Subjt:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPM

Query:  FAT-----------------SLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGS
        FAT                 SLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGS
Subjt:  FAT-----------------SLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGS

Query:  VNVSVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDSYM
        VNVSVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRE++  M
Subjt:  VNVSVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDSYM

A0A6J1FMM1 exopolygalacturonase-like2.0e-11475.18Show/hide
Query:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTI-DGQGAQTWSSGSACRRALTCP
        M AWEDAC   G S LLIPEG++ + Q+  SGPCF DLSPKV+ILGTLIAPT LTADVWI+F SL  L++T    S I DGQGA+TW  G  CR  L+C 
Subjt:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTI-DGQGAQTWSSGSACRRALTCP

Query:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI
        +F TSLKLS+V N TVSNI+LV+SKGFHV++  CDNIH SGFNITAPWNSQNTDGIHISQSTNINIT S+I VGDDCVSIGPGS+NVSVSNV CGPGHGI
Subjt:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI

Query:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWP-GDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRE
        S+GSLG+Y+ EKDVIGIRVENCTI  TQNGVRVKTWP GD  S ATNLTFQNIVM NVSNPIIIDQQYCPNH CD +E
Subjt:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWP-GDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRE

A0A6J1ITM7 exopolygalacturonase-like2.3e-11572.6Show/hide
Query:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTI-DGQGAQTWSSGSACRRALTCP
        M+AWE+AC  +G+S+ LIPEG +LV  +T SGPCF++LSPKVLI  TLIAPT LT DVWIHFHSL  L LT    ST+ +GQGAQTWS GSACR  +TCP
Subjt:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTI-DGQGAQTWSSGSACRRALTCP

Query:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI
        +F TSLKL+ V +  V NI+LVDSKGFHV++  CD+IH  GFNITAPWNSQNTDGIHIS STNIN+ NS+IGVGDDCVSIGPGS +V VSN+ CGPGHGI
Subjt:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI

Query:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDSY
        S+GSLG+YK E DVIGIRVENCTI+ TQNGVRVKTWPG+  SNA +LTFQNIVM NVSNPIIIDQ YCPNHSCDT+EV+ +
Subjt:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDSY

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)6.2e-6544.29Show/hide
Query:  AWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIA---PTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCP
        AW++AC +   S +L+P+GN+ V  ITL GPC S +   + + GTL A   P+ +    WI+ + +  L++  G     DGQG   W      +    C 
Subjt:  AWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIA---PTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCP

Query:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI
          + +L+L  V N  + ++  +DSK FHV++  C N+ F  F I+A   S NTDGIHI +S  +NI N+ I  GDDC+S+G GS N++++N+TCGPGHGI
Subjt:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI

Query:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDS
        S+GSLG+YK E+ V+GI V+NCTI G+QNGVR+KTWP      A+ + FQ+I M +V  PI+IDQ YCP + C T EV S
Subjt:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDS

P35338 Exopolygalacturonase1.3e-5944.2Show/hide
Query:  AWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTA----DVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTC
        AW  AC   G+  +LIP+G++LV Q+  +GPC  D++  + + G L+A T+L+       WI    +  L +T      +DGQG   WS  S C +   C
Subjt:  AWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTA----DVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTC

Query:  PMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHG
         +   SL +  V NG VS + L++SK FH++++QC N+      +TAP +S NTDGIH+  S+ I ITN+ IGVGDDC+SIGPG+  V+++ VTCGPGHG
Subjt:  PMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHG

Query:  ISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGS--NATNLTFQNIVMINVSNPIIIDQQYCPNHSC
        ISIGSLG+YK EKDV  I V++CT+  T  GVR+K +  D  S    + + ++NI M + +NPI ID +YCPN  C
Subjt:  ISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGS--NATNLTFQNIVMINVSNPIIIDQQYCPNHSC

Q05967 Polygalacturonase8.4e-6241.61Show/hide
Query:  AWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTN---LTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCP
        A+++AC +   S ++IP+G + ++Q+ L GPC S L  ++ I  TL AP++   L    W+  + L + +++ G +  +DGQ A  W     C+++  C 
Subjt:  AWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTN---LTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCP

Query:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI
            +L  +++ N T+ +I  +DSK FHV++ QC N+ F  FN++AP NS NTDGIH+S+S+++NIT+SN   GDDC+S+G  +  + ++ VTCGPGHGI
Subjt:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI

Query:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCD
        S+GSLG    EK V+G+ V NCT   T NGVR+KTWP        ++ F++I++ NVSNP++IDQ YCP + C+
Subjt:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCD

Q39766 Polygalacturonase2.3e-5941.16Show/hide
Query:  AWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTA---DVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCP
        AW++AC +   S ++IP+G YL+ ++ L GPC + +  ++ + GT+ AP + +A     W+ F+S+    +  G +   DGQG+  +   +   R     
Subjt:  AWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTA---DVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCP

Query:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI
        +   +++   V N  + +I   DSK FH+++F C NI      I AP  S NTDGIH+ +S  +NI  S+I  GDDC+SIG G+ N+ +  +TCGPGHGI
Subjt:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI

Query:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRE
        SIGSLGK++ E+ V GI++ NCTI  T NG R+KTWPG+ G   + + F++I M NVS+PI+IDQQYCP + C   E
Subjt:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRE

Q6H9K0 Exopolygalacturonase (Fragment)2.4e-6443.8Show/hide
Query:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVL--ILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTC
        M AW+ AC ++G S +LIP+GNY + ++ + GPC        +  ++     P+   +D W+ F+ +    LT     T+DGQG   W+  + C +   C
Subjt:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVL--ILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTC

Query:  PMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHG
           A +L+   + +  V +I  ++SK FH+++ +C++I F    +TAP  S NTDGIH+  S  + ITN+ I  GDDC+SIGPGS NV+++ V CGPGHG
Subjt:  PMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHG

Query:  ISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSC
        ISIGSLG+Y  EK+V GI V+ CT +GT NGVRVKTWP      AT+LTFQ++ M NV NP+I+DQ+YCP   C
Subjt:  ISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSC

Arabidopsis top hitse value%identityAlignment
AT1G02790.1 polygalacturonase 42.6e-5843.18Show/hide
Query:  WEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTN-LTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPMFA
        W   C +   + LL+P+G +L   +  +GPC S ++  V ++GT+IA T+      W  F  +  L LT     T  G+G   W +   C + + C +  
Subjt:  WEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTN-LTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPMFA

Query:  TSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGISIG
        TSLK  N+ N  ++ I+ V++K FH+ + + +N++     +TAP  S NTDGIH+S + N++I +S I  GDDCVS+G GS NV+V  V CGPGHG+S+G
Subjt:  TSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGISIG

Query:  SLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQY
        SLGKYK E+DV GI V NCT+  T NG+R+KTW G   S A ++ F+NI+M +V NPIIIDQ Y
Subjt:  SLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQY

AT2G33160.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein6.2e-6042.24Show/hide
Query:  AWEDAC-YNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTN---LTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTC
        AW +AC ++ G S + IP G + + Q+T SGPC S ++    I GTL+AP N   +  + WI F  +  L++T G L  +DGQG+ +W     C +   C
Subjt:  AWEDAC-YNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTN---LTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTC

Query:  PMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHG
           A ++  + V +  ++ +  ++SK  H ++F  ++ + +G  ITAP +S NTDGI I +S+++ I N  IG GDDC++I  G+ N+ +S+V CGPGHG
Subjt:  PMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHG

Query:  ISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGS-NATNLTFQNIVMINVSNPIIIDQQYCPNHSCDT
        IS+GSLG+YK EK+V G+ V N  INGT +G+R+KTW   +   + +N  ++NI MINV NPI+IDQQYCP+  CD+
Subjt:  ISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGS-NATNLTFQNIVMINVSNPIIIDQQYCPNHSCDT

AT3G07830.1 Pectin lyase-like superfamily protein1.9e-6141.13Show/hide
Query:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLT--ADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTC
        + A+  AC +     ++IP+G + + +I +SGPC S +  ++ +LGT++A  N     + W+ F  +    L  G   T DG+G   W   + C +   C
Subjt:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLT--ADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTC

Query:  PMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHG
             S++   V N  + +I+ +D+K FH+++    N+ F    I AP  S NTDGIH+ +S  ++I NS I  GDDCVS+G G VN+ V NV CGPGHG
Subjt:  PMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHG

Query:  ISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWP-GDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDS
        IS+GSLG+Y  E+DV GIRV NCT+  T NG+R+KTWP     + A+N+ F+NI++ NVSNPI+IDQ+YCP + C+ ++  S
Subjt:  ISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWP-GDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDS

AT4G18180.1 Pectin lyase-like superfamily protein2.3e-6244.89Show/hide
Query:  MAAWEDACYNEGESM-LLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCP
        +AAW+ AC +   S+ L+IP G + V  +  SGPC +  +  V +  +       +   WI F  +  L+LT G   T DGQGA  W   + C     C 
Subjt:  MAAWEDACYNEGESM-LLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCP

Query:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI
        +  TSLK   +    V  I+ V+SK FH+++ +C +   +  NITAP +S NTDGIHI +S+N+  + S+I  GDDCVSIG G+  ++++++ CGPGHGI
Subjt:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI

Query:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLG-SNATNLTFQNIVMINVSNPIIIDQQYCPNHSC
        S+GSLG+Y  EKDV G+ V++C I+GT NG+R+KTW    G S ATN+TF+NI+M NV+NPIIIDQ YCP  SC
Subjt:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLG-SNATNLTFQNIVMINVSNPIIIDQQYCPNHSC

AT5G48140.1 Pectin lyase-like superfamily protein1.3e-5739.57Show/hide
Query:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTA-DVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCP
        + A+ +AC    +S ++IP+G Y + +I + GPC + +  ++ +LGT+ A  N    + W+ F ++    L  G     DG+G   W   + C +   C 
Subjt:  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTA-DVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCP

Query:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI
            S++   V +  +  I  +D+K FH+++    N+ F    I AP  S NTDGIH+ +S  I I NS I  GDDCVS+G G  N+ V  VTCGPGHGI
Subjt:  MFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGI

Query:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWP-GDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRE
        SIGSLG+Y  E++V GI++ NCT+  T NG+R+KTWP     + A+++ F+NI++ NVSNPI+IDQ+YCP + C+ ++
Subjt:  SIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWP-GDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGTGGGAAGATGCATGTTATAACGAAGGAGAGTCCATGCTGTTAATACCGGAAGGGAATTACTTGGTTGACCAAATTACACTTTCAGGGCCATGTTTCAGTGA
CCTCTCTCCCAAAGTCCTCATTTTGGGCACTTTGATTGCCCCCACCAACCTCACCGCCGACGTTTGGATCCACTTCCATTCCCTCCCCCGCCTCTCCCTCACTGCCGGCC
ACTTATCCACCATCGACGGCCAGGGCGCCCAAACCTGGTCCTCCGGTTCTGCCTGTCGTCGTGCACTGACTTGTCCTATGTTTGCCACCTCTTTGAAGCTAAGCAATGTG
TTGAACGGGACAGTGAGTAATATAAACCTAGTGGATAGCAAGGGTTTTCATGTGTCCATTTTTCAGTGTGACAATATTCATTTTTCTGGATTCAATATTACAGCTCCTTG
GAATAGTCAAAACACTGATGGCATCCATATCAGCCAATCTACCAATATCAACATTACAAACTCCAACATCGGTGTTGGTGATGATTGTGTTTCCATTGGACCTGGTAGTG
TGAACGTGTCAGTTTCTAATGTTACATGTGGTCCAGGACATGGAATCAGTATCGGGAGTTTAGGGAAGTACAAAATGGAGAAAGATGTGATAGGAATAAGGGTGGAGAAT
TGTACCATAAATGGAACTCAAAATGGAGTGAGGGTGAAAACATGGCCAGGAGATCTTGGCAGCAATGCTACCAATTTGACATTTCAAAACATTGTGATGATCAATGTCTC
AAATCCCATTATCATAGATCAACAATATTGTCCTAATCATTCTTGTGACACACGAGAGGTAGATAGTTATATGATTTGTATTTATCTCACTACTTTTAAGTACTTCTTAT
ACATATACTCCCAATTAAAGTATGGATTTACTCATGTGCTAAGCTCTTATTATTATTATTATTATTATTATTATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCGTGGGAAGATGCATGTTATAACGAAGGAGAGTCCATGCTGTTAATACCGGAAGGGAATTACTTGGTTGACCAAATTACACTTTCAGGGCCATGTTTCAGTGA
CCTCTCTCCCAAAGTCCTCATTTTGGGCACTTTGATTGCCCCCACCAACCTCACCGCCGACGTTTGGATCCACTTCCATTCCCTCCCCCGCCTCTCCCTCACTGCCGGCC
ACTTATCCACCATCGACGGCCAGGGCGCCCAAACCTGGTCCTCCGGTTCTGCCTGTCGTCGTGCACTGACTTGTCCTATGTTTGCCACCTCTTTGAAGCTAAGCAATGTG
TTGAACGGGACAGTGAGTAATATAAACCTAGTGGATAGCAAGGGTTTTCATGTGTCCATTTTTCAGTGTGACAATATTCATTTTTCTGGATTCAATATTACAGCTCCTTG
GAATAGTCAAAACACTGATGGCATCCATATCAGCCAATCTACCAATATCAACATTACAAACTCCAACATCGGTGTTGGTGATGATTGTGTTTCCATTGGACCTGGTAGTG
TGAACGTGTCAGTTTCTAATGTTACATGTGGTCCAGGACATGGAATCAGTATCGGGAGTTTAGGGAAGTACAAAATGGAGAAAGATGTGATAGGAATAAGGGTGGAGAAT
TGTACCATAAATGGAACTCAAAATGGAGTGAGGGTGAAAACATGGCCAGGAGATCTTGGCAGCAATGCTACCAATTTGACATTTCAAAACATTGTGATGATCAATGTCTC
AAATCCCATTATCATAGATCAACAATATTGTCCTAATCATTCTTGTGACACACGAGAGGTAGATAGTTATATGATTTGTATTTATCTCACTACTTTTAAGTACTTCTTAT
ACATATACTCCCAATTAAAGTATGGATTTACTCATGTGCTAAGCTCTTATTATTATTATTATTATTATTATTATTATTGA
Protein sequenceShow/hide protein sequence
MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPMFATSLKLSNV
LNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINITNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVEN
CTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTREVDSYMICIYLTTFKYFLYIYSQLKYGFTHVLSSYYYYYYYYYY