; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0158191 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0158191
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionLOB domain-containing protein
Genome locationCMiso1.1chr06:6803541..6804160
RNA-Seq ExpressionCmc06g0158191
SyntenyCmc06g0158191
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014789.1 LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-6887.92Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAE+L FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNS
        TRAEIA +AS++QE   QL DFA QPIQGPN++GFSQIGLS+PAH FNS
Subjt:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNS

XP_004140854.1 LOB domain-containing protein 24 [Cucumis sativus]9.4e-7794.08Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR EAAETLIFEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFY
        TRAEIACVAS+VQ EQPQ QDFAF+PIQGPNSVGFSQIGLS+PAHCFNS+F+
Subjt:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFY

XP_008439169.1 PREDICTED: LOB domain-containing protein 24-like [Cucumis melo]1.3e-8198.68Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFY
        TRAEIACVAS+VQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNSSF+
Subjt:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFY

XP_022985104.1 LOB domain-containing protein 24-like [Cucurbita maxima]4.7e-6887.25Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNS
        TRAEIA +AS++ +E  Q QDFA +PIQGPN++GFSQIGLS+PAH FNS
Subjt:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNS

XP_023522202.1 LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]1.9e-6989.26Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNS
        TRAEIA +AS++QE QP  QDFA QPIQGPN++GFSQIGLS+PAH FNS
Subjt:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNS

TrEMBL top hitse value%identityAlignment
A0A0A0L9N7 LOB domain-containing protein4.6e-7794.08Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR EAAETLIFEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFY
        TRAEIACVAS+VQ EQPQ QDFAF+PIQGPNSVGFSQIGLS+PAHCFNS+F+
Subjt:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFY

A0A0A0LLX6 LOB domain-containing protein4.3e-5173.97Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRF IVHRIYGASNVAKFL Q+P  LRGEAAETL FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACVASDVQEEQPQLQDFAF-QPIQGPNSVGFSQIGLSSPAH
        TRAEIA +AS+   +Q Q +DF F  P  GP        GLS+PAH
Subjt:  TRAEIACVASDVQEEQPQLQDFAF-QPIQGPNSVGFSQIGLSSPAH

A0A1S3AY36 LOB domain-containing protein 24-like6.2e-8298.68Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFY
        TRAEIACVAS+VQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNSSF+
Subjt:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFY

A0A6J1E5I6 LOB domain-containing protein 24-like1.1e-6787.25Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRC SDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAE+L FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNS
        TRAEIA +AS++QE QP   DFA QPIQGPN++GFSQIGLS+PAH FNS
Subjt:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNS

A0A6J1JCD0 LOB domain-containing protein 24-like2.3e-6887.25Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNS
        TRAEIA +AS++ +E  Q QDFA +PIQGPN++GFSQIGLS+PAH FNS
Subjt:  TRAEIACVASDVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNS

SwissProt top hitse value%identityAlignment
P59467 LOB domain-containing protein 232.6e-3761.02Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   R EA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IACVASDVQEEQPQLQDF
        IA   +  +  Q  + DF
Subjt:  IACVASDVQEEQPQLQDF

P59468 LOB domain-containing protein 241.5e-3762.5Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   R EA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IACVASDVQEEQ
        IA   + + + Q
Subjt:  IACVASDVQEEQ

Q8LBW3 LOB domain-containing protein 124.3e-3252.54Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H R +A  +L+FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEIACVASDVQEEQPQLQ
        AEI C+     + +P LQ
Subjt:  AEIACVASDVQEEQPQLQ

Q9FKZ3 LOB domain-containing protein 368.4e-2850Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CAACK+LRR+C  +C+F+P+FP + PQ+F  VH+++GASNVAK L++L ++ R +A  +L +EA+ R+ DPVYGCVG+IS LQH+L      L   +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEIA
         E+A
Subjt:  AEIA

Q9SHE9 LOB domain-containing protein 41.6e-3158Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI
        CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H RG+A  ++++EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI

Arabidopsis top hitse value%identityAlignment
AT1G31320.1 LOB domain-containing protein 41.2e-3258Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI
        CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H RG+A  ++++EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein3.1e-3352.54Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H R +A  +L+FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEIACVASDVQEEQPQLQ
        AEI C+     + +P LQ
Subjt:  AEIACVASDVQEEQPQLQ

AT3G26620.1 LOB domain-containing protein 231.9e-3861.02Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   R EA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IACVASDVQEEQPQLQDF
        IA   +  +  Q  + DF
Subjt:  IACVASDVQEEQPQLQDF

AT3G26660.1 LOB domain-containing protein 241.1e-3862.5Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   R EA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IACVASDVQEEQ
        IA   + + + Q
Subjt:  IACVASDVQEEQ

AT5G66870.1 ASYMMETRIC LEAVES 2-like 16.0e-2950Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CAACK+LRR+C  +C+F+P+FP + PQ+F  VH+++GASNVAK L++L ++ R +A  +L +EA+ R+ DPVYGCVG+IS LQH+L      L   +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEIA
         E+A
Subjt:  AEIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCTGGTCGTTGTGCAGCTTGTAAATATTTAAGAAGAAGATGCCCTTCCGATTGTATCTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGT
TCATCGAATTTATGGTGCTAGTAATGTTGCTAAATTCCTCCATCAACTTCCTACACATTTAAGAGGTGAAGCAGCAGAAACTTTAATATTTGAGGCAAAATGCAGAATTG
AAGATCCAGTTTATGGATGTGTAGGGATTATTTCCCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTGAGATTGCTTGTGTGGCTTCC
GATGTCCAAGAAGAACAGCCTCAACTCCAAGATTTTGCATTTCAGCCCATCCAAGGCCCAAATTCTGTTGGGTTCTCTCAAATTGGGCTTTCCAGTCCGGCCCATTGTTT
TAATTCCAGCTTTTACTAA
mRNA sequenceShow/hide mRNA sequence
TTTTTAGTATGATTTCTGGTCGTTGTGCAGCTTGTAAATATTTAAGAAGAAGATGCCCTTCCGATTGTATCTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTC
ACCATTGTTCATCGAATTTATGGTGCTAGTAATGTTGCTAAATTCCTCCATCAACTTCCTACACATTTAAGAGGTGAAGCAGCAGAAACTTTAATATTTGAGGCAAAATG
CAGAATTGAAGATCCAGTTTATGGATGTGTAGGGATTATTTCCCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTGAGATTGCTTGTG
TGGCTTCCGATGTCCAAGAAGAACAGCCTCAACTCCAAGATTTTGCATTTCAGCCCATCCAAGGCCCAAATTCTGTTGGGTTCTCTCAAATTGGGCTTTCCAGTCCGGCC
CATTGTTTTAATTCCAGCTTTTACTAA
Protein sequenceShow/hide protein sequence
MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVAS
DVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFY