; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0159251 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0159251
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCMiso1.1chr06:7551093..7553732
RNA-Seq ExpressionCmc06g0159251
SyntenyCmc06g0159251
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033710.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.4e-184100Show/hide
Query:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
        ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
Subjt:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF

Query:  ADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
        ADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
Subjt:  ADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE

Query:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

TYK23004.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]6.8e-18499.7Show/hide
Query:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
        ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
Subjt:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF

Query:  ADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
        ADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNS NGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
Subjt:  ADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE

Query:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

XP_004140747.2 pentatricopeptide repeat-containing protein At4g21190 [Cucumis sativus]2.1e-17794.08Show/hide
Query:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA
        M IIFTSMTH LAQATL+SF ASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGA
Subjt:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA

Query:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH
        LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LES+PRIFFHKMISLYYD+AMH
Subjt:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH

Query:  DKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSED
        DKLFEVFADMEELGVQPNMAIVTKVGN+FQELGMLDKY+KLMKKYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTNS+DEAEITSED
Subjt:  DKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSED

Query:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        SSLEDDE++ +DPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

XP_008439301.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X2 [Cucumis melo]3.5e-188100Show/hide
Query:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA
        MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA
Subjt:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA

Query:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH
        LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH
Subjt:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH

Query:  DKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSED
        DKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSED
Subjt:  DKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSED

Query:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

XP_016899030.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Cucumis melo]1.2e-17599.68Show/hide
Query:  YRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL
        +RMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL
Subjt:  YRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL

Query:  ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVT
        ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVT
Subjt:  ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVT

Query:  KVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW
        KVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW
Subjt:  KVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW

Query:  SKSNFEHDFMGLGQL
        SKSNFEHDFMGLGQL
Subjt:  SKSNFEHDFMGLGQL

TrEMBL top hitse value%identityAlignment
A0A0A0L6Q9 Uncharacterized protein1.0e-17794.08Show/hide
Query:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA
        M IIFTSMTH LAQATL+SF ASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGA
Subjt:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA

Query:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH
        LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LES+PRIFFHKMISLYYD+AMH
Subjt:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH

Query:  DKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSED
        DKLFEVFADMEELGVQPNMAIVTKVGN+FQELGMLDKY+KLMKKYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTNS+DEAEITSED
Subjt:  DKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSED

Query:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        SSLEDDE++ +DPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

A0A1S3AY30 pentatricopeptide repeat-containing protein At4g21190 isoform X21.7e-188100Show/hide
Query:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA
        MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA
Subjt:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA

Query:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH
        LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH
Subjt:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH

Query:  DKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSED
        DKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSED
Subjt:  DKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSED

Query:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

A0A1S4DTK8 pentatricopeptide repeat-containing protein At4g21190 isoform X15.6e-17699.68Show/hide
Query:  YRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL
        +RMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL
Subjt:  YRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL

Query:  ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVT
        ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVT
Subjt:  ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVT

Query:  KVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW
        KVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW
Subjt:  KVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW

Query:  SKSNFEHDFMGLGQL
        SKSNFEHDFMGLGQL
Subjt:  SKSNFEHDFMGLGQL

A0A5A7SS06 Pentatricopeptide repeat-containing protein6.6e-185100Show/hide
Query:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
        ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
Subjt:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF

Query:  ADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
        ADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
Subjt:  ADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE

Query:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

A0A5D3DHA7 Pentatricopeptide repeat-containing protein3.3e-18499.7Show/hide
Query:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
        ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
Subjt:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF

Query:  ADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
        ADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNS NGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
Subjt:  ADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE

Query:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic2.9e-4445.59Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  + ++++Y   +++Y Y  G+RV+++ +Y
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKY

Query:  LSEN
         SE+
Subjt:  LSEN

Q8LG95 Pentatricopeptide repeat-containing protein At4g211901.3e-10064.43Show/hide
Query:  MLTLVYTFP---VTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L Y+ P   + ++   +  F+  P++ VVCAA+GPRPR PRVWKTRKRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLVYTFP---VTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIV
        LE+++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNAL ED RLDEAEELWNKLF ++LE  PR FF+KMIS+YY R MH KLFEVFADMEELGV+PN+AIV
Subjt:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIV

Query:  TKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDE
        + VG +F +L M DKYEKLMKKYPPP+WE+RYIKG+RVK++ K L+E      GLS             DE +I   D+ +E +EE G+D  E  EDE
Subjt:  TKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDE

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein2.0e-4545.59Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  + ++++Y   +++Y Y  G+RV+++ +Y
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKY

Query:  LSEN
         SE+
Subjt:  LSEN

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein2.0e-4545.59Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  + ++++Y   +++Y Y  G+RV+++ +Y
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKY

Query:  LSEN
         SE+
Subjt:  LSEN

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein2.0e-4545.59Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  + ++++Y   +++Y Y  G+RV+++ +Y
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKY

Query:  LSEN
         SE+
Subjt:  LSEN

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein2.0e-4545.59Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  + ++++Y   +++Y Y  G+RV+++ +Y
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKY

Query:  LSEN
         SE+
Subjt:  LSEN

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein9.0e-10264.43Show/hide
Query:  MLTLVYTFP---VTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L Y+ P   + ++   +  F+  P++ VVCAA+GPRPR PRVWKTRKRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLVYTFP---VTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIV
        LE+++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNAL ED RLDEAEELWNKLF ++LE  PR FF+KMIS+YY R MH KLFEVFADMEELGV+PN+AIV
Subjt:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIV

Query:  TKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDE
        + VG +F +L M DKYEKLMKKYPPP+WE+RYIKG+RVK++ K L+E      GLS             DE +I   D+ +E +EE G+D  E  EDE
Subjt:  TKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAATCATTTTCACTTCAATGACACACTATCTAGCCCAAGCAACGCTCGCGTCCTTCTCGGCTTCCTACCGGATGCTTACTTTAGTTTACACTTTTCCAGTCACGTC
CAAAAGGATAGAATCTGTAAATTTTTCCTGGTGTCCAAGCAGTTCGGTTGTATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTTTGGAAAACCAGAAAGAGGA
TTGGGACTATATCCAAGGCAGCAAAGCTTGTTGATTGTGTAAAGGGACTGTCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTAGAG
TTTCCTCTTATTACAGTAAAGAAAGCCCTGAAGACCTTAGAGAACCAAAGAGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGTTAAGTAAAGGCCAGGGAAGAAC
AATGGGAAGCTATTTTACGCTATTAAATGCATTAGTTGAAGATGGAAGACTTGATGAAGCTGAAGAGCTTTGGAACAAATTGTTTTCTCAGTATTTGGAGAGCATGCCTC
GCATATTCTTTCATAAAATGATATCTCTCTACTACGATCGGGCAATGCACGACAAGTTATTTGAGGTATTTGCTGATATGGAGGAACTTGGGGTTCAACCAAATATGGCA
ATTGTCACTAAGGTTGGAAACATTTTCCAAGAATTGGGTATGCTCGATAAATATGAAAAACTAATGAAGAAGTATCCCCCACCAAAATGGGAATATCGTTACATCAAAGG
AAAACGTGTCAAAATACGAACCAAGTATCTGTCTGAAAATGGTAATTCCATGAATGGTTTAAGTGAGCAAAACAAAATGGAGCATAGTTCAACAAATTCATTAGATGAAG
CTGAAATAACTTCCGAAGATTCCAGTCTCGAAGATGATGAGGAAATCGGCAAAGATCCAGATGAAATTCTGGAAGATGAACATATGTGGAGCAAATCCAATTTTGAGCAT
GATTTCATGGGGCTTGGGCAATTGTAA
mRNA sequenceShow/hide mRNA sequence
TTTGGGTTTTGAGATATTTGGGGGCCATTTTCCTTAGAAAAACTGGAAATGCGAATCATTTTCACTTCAATGACACACTATCTAGCCCAAGCAACGCTCGCGTCCTTCTC
GGCTTCCTACCGGATGCTTACTTTAGTTTACACTTTTCCAGTCACGTCCAAAAGGATAGAATCTGTAAATTTTTCCTGGTGTCCAAGCAGTTCGGTTGTATGCGCTGCAA
AGGGTCCACGGCCGAGATATCCTCGGGTTTGGAAAACCAGAAAGAGGATTGGGACTATATCCAAGGCAGCAAAGCTTGTTGATTGTGTAAAGGGACTGTCTAACGTCAAA
GAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTAGAGTTTCCTCTTATTACAGTAAAGAAAGCCCTGAAGACCTTAGAGAACCAAAGAGAATGGAAGAG
GATAATTCAGTTGACGAAATGGATGTTAAGTAAAGGCCAGGGAAGAACAATGGGAAGCTATTTTACGCTATTAAATGCATTAGTTGAAGATGGAAGACTTGATGAAGCTG
AAGAGCTTTGGAACAAATTGTTTTCTCAGTATTTGGAGAGCATGCCTCGCATATTCTTTCATAAAATGATATCTCTCTACTACGATCGGGCAATGCACGACAAGTTATTT
GAGGTATTTGCTGATATGGAGGAACTTGGGGTTCAACCAAATATGGCAATTGTCACTAAGGTTGGAAACATTTTCCAAGAATTGGGTATGCTCGATAAATATGAAAAACT
AATGAAGAAGTATCCCCCACCAAAATGGGAATATCGTTACATCAAAGGAAAACGTGTCAAAATACGAACCAAGTATCTGTCTGAAAATGGTAATTCCATGAATGGTTTAA
GTGAGCAAAACAAAATGGAGCATAGTTCAACAAATTCATTAGATGAAGCTGAAATAACTTCCGAAGATTCCAGTCTCGAAGATGATGAGGAAATCGGCAAAGATCCAGAT
GAAATTCTGGAAGATGAACATATGTGGAGCAAATCCAATTTTGAGCATGATTTCATGGGGCTTGGGCAATTGTAAATATATACACACATTGTAGTTACTTGTCGAAGTTT
TTCATAGTGTAGACTTTTATATTTCTGTTCTTATTATTTTGTAGTTTGAATGGATGGGATGATACTTGATCATAGAGCCAGTTCCCTTTATTTCAGCCTTGAATATTATA
GTCCCCGATCCAACATATGCCTAGGCCTATGATGAACTAGGGAACAATTCTTGGATTAAATTTTTCATTAACAAAATATACGAACGTTGATCTATCCATAAAAAATCAT
Protein sequenceShow/hide protein sequence
MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELE
FPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMA
IVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMWSKSNFEH
DFMGLGQL