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Cmc06g0159281 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0159281
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr06:7565479..7565874
RNA-Seq ExpressionCmc06g0159281
SyntenyCmc06g0159281
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042053.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]7.0e-4475.38Show/hide
Query:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS
        +LIVYVD+IVL GDD  EI QLK +M +EFE KDLGNLKYFLGMEVARSKEG SVSQRKY  DLLT+T MLGCRPA+TPIEFN KLGNS D+ PI+KE+ 
Subjt:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS

Query:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA
           V KLIYLSHTR DIS+ V+VVSQFMQA
Subjt:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA

KAA0054884.1 Beta-galactosidase [Cucumis melo var. makuwa]4.1e-4474.62Show/hide
Query:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS
        +LIVYVD+IVL GDD  EI QLK +M +EFE KDL NLKYFLGMEVARSKEG SVSQRKY  DLLT+T MLGCRPA+TPIEFN KLGNS D+ P++KE+ 
Subjt:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS

Query:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA
         C V KLIYLSHTR DIS+ V+VVSQFMQA
Subjt:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA

KAA0061447.1 Beta-galactosidase [Cucumis melo var. makuwa]7.0e-4474.62Show/hide
Query:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS
        +LIVYVD+IVL GDD  EI QLK +M +EFE KDLGNLKYFLGMEVARSKEG SVSQRKY  DLLT+T MLGCRPA+TPIEFN KLGNS D+ P++KE+ 
Subjt:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS

Query:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA
           V KLIYLSHTR DIS+ V+VVSQFMQA
Subjt:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA

TYK11735.1 Beta-galactosidase [Cucumis melo var. makuwa]1.4e-4475.38Show/hide
Query:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS
        +LIVYVD+IVL GDD  EI QLK +M +EFE KDLGNLKYFLGMEVARSKEG SVSQRKY  DLLT+T MLGCRPA+TPIEFN KLGNS D+ P++KE+ 
Subjt:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS

Query:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA
           V KLIYLSHTRLDIS+ V+VVSQFMQA
Subjt:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA

XP_031741968.1 uncharacterized protein LOC116403980 [Cucumis sativus]7.0e-4475.19Show/hide
Query:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS
        +LIVYVD+IVL GDD AEI QLK +M +EFE KDLGNLKYFLGMEVARSKEG SVSQRKYI DLLT+T MLGCRP +TPIEFN KLGNS D+ P++KE+ 
Subjt:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS

Query:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQ
           V KLIYLSHTR DIS+ V+VVSQFMQ
Subjt:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQ

TrEMBL top hitse value%identityAlignment
A0A5A7TFR5 Retrovirus-related Pol polyprotein from transposon TNT 1-943.4e-4475.38Show/hide
Query:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS
        +LIVYVD+IVL GDD  EI QLK +M +EFE KDLGNLKYFLGMEVARSKEG SVSQRKY  DLLT+T MLGCRPA+TPIEFN KLGNS D+ PI+KE+ 
Subjt:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS

Query:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA
           V KLIYLSHTR DIS+ V+VVSQFMQA
Subjt:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA

A0A5A7UI90 Beta-galactosidase2.0e-4474.62Show/hide
Query:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS
        +LIVYVD+IVL GDD  EI QLK +M +EFE KDL NLKYFLGMEVARSKEG SVSQRKY  DLLT+T MLGCRPA+TPIEFN KLGNS D+ P++KE+ 
Subjt:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS

Query:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA
         C V KLIYLSHTR DIS+ V+VVSQFMQA
Subjt:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA

A0A5A7V3J5 Beta-galactosidase3.4e-4474.62Show/hide
Query:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS
        +LIVYVD+IVL GDD  EI QLK +M +EFE KDLGNLKYFLGMEVARSKEG SVSQRKY  DLLT+T MLGCRPA+TPIEFN KLGNS D+ P++KE+ 
Subjt:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS

Query:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA
           V KLIYLSHTR DIS+ V+VVSQFMQA
Subjt:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA

A0A5D3BJK7 Beta-galactosidase4.4e-4474.62Show/hide
Query:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS
        +LIVYVD+IVL GDD  EI QLK +M +EFE KDLGNLKYFLGMEVARSKEG SVSQRKY  DLLT+T MLGCRPA+TPIEFN KLGNS D+ P++KE+ 
Subjt:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS

Query:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA
           V KLIYLSHTR DIS+ V+VVSQFMQA
Subjt:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA

A0A5D3CJM2 Beta-galactosidase6.8e-4575.38Show/hide
Query:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS
        +LIVYVD+IVL GDD  EI QLK +M +EFE KDLGNLKYFLGMEVARSKEG SVSQRKY  DLLT+T MLGCRPA+TPIEFN KLGNS D+ P++KE+ 
Subjt:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKS

Query:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA
           V KLIYLSHTRLDIS+ V+VVSQFMQA
Subjt:  CCHVRKLIYLSHTRLDISYDVNVVSQFMQA

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-1031.88Show/hide
Query:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGAS--VSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNS------GDK
        +L++YVD++++ G D   I +LK  +   F+ KDLG  +  LGM++ R +      +SQ KYI  +L +  M   +P +TP+  + KL          +K
Subjt:  MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGAS--VSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNS------GDK

Query:  APINKEKSCCHVRKLIY-LSHTRLDISYDVNVVSQFMQ
          + K      V  L+Y +  TR DI++ V VVS+F++
Subjt:  APINKEKSCCHVRKLIY-LSHTRLDISYDVNVVSQFMQ

P92519 Uncharacterized mitochondrial protein AtMg008101.3e-1337.01Show/hide
Query:  LIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKSC
        L++YVD+I+L G     +  L  ++ + F  KDLG + YFLG+++     G  +SQ KY   +L    ML C+P +TP+        S  K P   +   
Subjt:  LIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKSC

Query:  CHVRKLIYLSHTRLDISYDVNVVSQFM
          V  L YL+ TR DISY VN+V Q M
Subjt:  CHVRKLIYLSHTRLDISYDVNVVSQFM

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.4e-1641.41Show/hide
Query:  LIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLG-NSGDKAPINKEKS
        ++VYVD+I++ G+D   +    + +   F  KD   L YFLG+E  R   G  +SQR+YI DLL +T M+  +P  TP+  + KL   SG K     E  
Subjt:  LIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLG-NSGDKAPINKEKS

Query:  CCHVRKLIYLSHTRLDISYDVNVVSQFM
           V  L YL+ TR DISY VN +SQFM
Subjt:  CCHVRKLIYLSHTRLDISYDVNVVSQFM

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.3e-1640.62Show/hide
Query:  LIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLG-NSGDKAPINKEKS
        ++VYVD+I++ G+DT  +    + +   F  K+  +L YFLG+E  R  +G  +SQR+Y  DLL +T ML  +P  TP+  + KL  +SG K P   E  
Subjt:  LIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLG-NSGDKAPINKEKS

Query:  CCHVRKLIYLSHTRLDISYDVNVVSQFM
           V  L YL+ TR D+SY VN +SQ+M
Subjt:  CCHVRKLIYLSHTRLDISYDVNVVSQFM

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.1e-2239.53Show/hide
Query:  LIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKSC
        ++VYVD+I++  ++ A + +LK+++ + F+ +DLG LKYFLG+E+ARS  G ++ QRKY  DLL +T +LGC+P++ P++ +           ++ +   
Subjt:  LIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKSC

Query:  CHVRKLIYLSHTRLDISYDVNVVSQFMQA
          + +L+YL  TRLDIS+ VN +SQF +A
Subjt:  CHVRKLIYLSHTRLDISYDVNVVSQFMQA

ATMG00810.1 DNA/RNA polymerases superfamily protein9.4e-1537.01Show/hide
Query:  LIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKSC
        L++YVD+I+L G     +  L  ++ + F  KDLG + YFLG+++     G  +SQ KY   +L    ML C+P +TP+        S  K P   +   
Subjt:  LIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKSC

Query:  CHVRKLIYLSHTRLDISYDVNVVSQFM
          V  L YL+ TR DISY VN+V Q M
Subjt:  CHVRKLIYLSHTRLDISYDVNVVSQFM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATTGTTTATGTTGATAACATTGTTTTACCTGGGGATGACACCGCTGAGATCATCCAACTGAAAAATAAGATGGATAATGAGTTTGAAAGTAAAGACTTGGGAAA
TCTAAAGTATTTCCTTGGGATGGAAGTAGCTAGATCAAAAGAAGGTGCCTCTGTATCTCAAAGGAAGTATATCTTTGATTTGCTGACTAAAACATGTATGTTGGGATGTC
GTCCTGCTAATACTCCGATTGAGTTCAACAGTAAACTGGGAAATTCAGGTGATAAAGCTCCAATTAATAAAGAAAAATCTTGTTGCCATGTGAGAAAGTTGATCTACTTG
TCACACACTAGACTGGATATCTCCTATGATGTGAATGTCGTTAGCCAGTTCATGCAGGCCCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGATTGTTTATGTTGATAACATTGTTTTACCTGGGGATGACACCGCTGAGATCATCCAACTGAAAAATAAGATGGATAATGAGTTTGAAAGTAAAGACTTGGGAAA
TCTAAAGTATTTCCTTGGGATGGAAGTAGCTAGATCAAAAGAAGGTGCCTCTGTATCTCAAAGGAAGTATATCTTTGATTTGCTGACTAAAACATGTATGTTGGGATGTC
GTCCTGCTAATACTCCGATTGAGTTCAACAGTAAACTGGGAAATTCAGGTGATAAAGCTCCAATTAATAAAGAAAAATCTTGTTGCCATGTGAGAAAGTTGATCTACTTG
TCACACACTAGACTGGATATCTCCTATGATGTGAATGTCGTTAGCCAGTTCATGCAGGCCCTATGA
Protein sequenceShow/hide protein sequence
MLIVYVDNIVLPGDDTAEIIQLKNKMDNEFESKDLGNLKYFLGMEVARSKEGASVSQRKYIFDLLTKTCMLGCRPANTPIEFNSKLGNSGDKAPINKEKSCCHVRKLIYL
SHTRLDISYDVNVVSQFMQAL