; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0159341 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0159341
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr06:7589143..7590291
RNA-Seq ExpressionCmc06g0159341
SyntenyCmc06g0159341
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0006281 - DNA repair (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0008622 - epsilon DNA polymerase complex (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033720.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]8.9e-225100Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR
        MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR

Query:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKEL
        NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKEL
Subjt:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKEL

Query:  FTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERD
        FTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERD
Subjt:  FTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERD

Query:  LVISALKENLLIAQNRMKKQADLHRRELKFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPPRP
        LVISALKENLLIAQNRMKKQADLHRRELKFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPPRP
Subjt:  LVISALKENLLIAQNRMKKQADLHRRELKFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPPRP

KAA0040609.1 DNA polymerase epsilon catalytic subunit A-like [Cucumis melo var. makuwa]2.1e-20591.36Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR
        +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQR
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR

Query:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE
        NKT+ALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGG DSIMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHGIPNSI+TDRDK+FLSHFWKE
Subjt:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE

Query:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER
        LFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHA  KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Subjt:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER

Query:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP
        DLVISALKENL++ QNRMKKQADLHRRELKF+V D+VYLKLRPYRQRSL RKRCE LAPKFYG YRI+EEIGEVAYRLNLPP
Subjt:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP

KAA0066550.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]3.8e-20791.88Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR
        +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDSVLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQR
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR

Query:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE
        NKT+ALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHGI NSI+TDRDK+FLSHFWKE
Subjt:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE

Query:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER
        LFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHAS KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Subjt:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER

Query:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP
        DLVISALKENL++AQNRMKKQADLHR+ELKF+V D+VYLKLRPYRQRSL RKRCEKLAPKFYGPYRI+EEIGEVAYRLNLPP
Subjt:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP

TYJ98047.1 Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]4.2e-20691.36Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR
        +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDSVLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQR
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR

Query:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE
        NKT+ALAPAGLLQPLPLPNLILEDWTMDFI+GLPKAGGYD+IMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHGI NSI+TDRDK+FLSHFWKE
Subjt:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE

Query:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER
        LFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHA  KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Subjt:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER

Query:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP
        DLVISALKENL++AQNRMKKQADLHRRELKF+V D+VYLKLRPYRQRSL RKRCEKLAPKFYGPYRI+EEIGEVAYRLNLPP
Subjt:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP

TYK05651.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]9.3e-20691.36Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR
        +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDSVLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQR
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR

Query:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE
        NKT+ALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHGIPNSI+TDRDK+FLSHFWKE
Subjt:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE

Query:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER
        LFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHA  KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Subjt:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER

Query:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP
        DLVISALKENL++ QNRMKKQADLHRRELKF+V D+VYLKLRPYRQRSL RKRCE LAPKFYG YRI+EEIGEVAYRLNLPP
Subjt:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP

TrEMBL top hitse value%identityAlignment
A0A5A7SS14 Retrotransposable element Tf24.3e-225100Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR
        MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR

Query:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKEL
        NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKEL
Subjt:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKEL

Query:  FTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERD
        FTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERD
Subjt:  FTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERD

Query:  LVISALKENLLIAQNRMKKQADLHRRELKFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPPRP
        LVISALKENLLIAQNRMKKQADLHRRELKFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPPRP
Subjt:  LVISALKENLLIAQNRMKKQADLHRRELKFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPPRP

A0A5A7TH70 DNA polymerase epsilon catalytic subunit1.0e-20591.36Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR
        +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQR
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR

Query:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE
        NKT+ALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGG DSIMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHGIPNSI+TDRDK+FLSHFWKE
Subjt:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE

Query:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER
        LFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHA  KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Subjt:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER

Query:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP
        DLVISALKENL++ QNRMKKQADLHRRELKF+V D+VYLKLRPYRQRSL RKRCE LAPKFYG YRI+EEIGEVAYRLNLPP
Subjt:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP

A0A5A7VHA7 Ty3/gypsy retrotransposon protein1.8e-20791.88Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR
        +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDSVLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQR
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR

Query:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE
        NKT+ALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHGI NSI+TDRDK+FLSHFWKE
Subjt:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE

Query:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER
        LFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHAS KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Subjt:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER

Query:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP
        DLVISALKENL++AQNRMKKQADLHR+ELKF+V D+VYLKLRPYRQRSL RKRCEKLAPKFYGPYRI+EEIGEVAYRLNLPP
Subjt:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP

A0A5D3BFZ9 Transposon Tf2-6 polyprotein2.0e-20691.36Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR
        +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDSVLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQR
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR

Query:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE
        NKT+ALAPAGLLQPLPLPNLILEDWTMDFI+GLPKAGGYD+IMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHGI NSI+TDRDK+FLSHFWKE
Subjt:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE

Query:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER
        LFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHA  KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Subjt:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER

Query:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP
        DLVISALKENL++AQNRMKKQADLHRRELKF+V D+VYLKLRPYRQRSL RKRCEKLAPKFYGPYRI+EEIGEVAYRLNLPP
Subjt:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP

A0A5D3C142 Retrotransposable element Tf24.5e-20691.36Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR
        +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDSVLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQR
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQR

Query:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE
        NKT+ALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHGIPNSI+TDRDK+FLSHFWKE
Subjt:  NKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKE

Query:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER
        LFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHA  KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Subjt:  LFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER

Query:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP
        DLVISALKENL++ QNRMKKQADLHRRELKF+V D+VYLKLRPYRQRSL RKRCE LAPKFYG YRI+EEIGEVAYRLNLPP
Subjt:  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPP

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.4e-4730.83Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQ
        +  E   D +L  ++N   E+   + N Q + G L+  K +++L  ++ L  +++  +H+     H G       +     W G++  +++YV+ C  CQ
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQ

Query:  RNKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWK
         NK++   P G LQP+P      E  +MDFI  LP++ GY+++ VVVDR  KMA  +      TA+Q A  F + +I+  G P  II D D IF S  WK
Subjt:  RNKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWK

Query:  ELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ
        +        +K S  + PQTDGQTER N+ +E  LRC C+  P  W   I   +  YN   H++ +  PF++V+       P  L  + D+   N+    
Subjt:  ELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ

Query:  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLP
          +E   V   +KE+L     +MKK  D+  +E+ +F+  D+ +     R ++    +  KLAP F GP+ ++++ G   Y L+LP
Subjt:  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLP

P0CT35 Transposon Tf2-2 polyprotein2.4e-4730.83Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQ
        +  E   D +L  ++N   E+   + N Q + G L+  K +++L  ++ L  +++  +H+     H G       +     W G++  +++YV+ C  CQ
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQ

Query:  RNKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWK
         NK++   P G LQP+P      E  +MDFI  LP++ GY+++ VVVDR  KMA  +      TA+Q A  F + +I+  G P  II D D IF S  WK
Subjt:  RNKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWK

Query:  ELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ
        +        +K S  + PQTDGQTER N+ +E  LRC C+  P  W   I   +  YN   H++ +  PF++V+       P  L  + D+   N+    
Subjt:  ELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ

Query:  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLP
          +E   V   +KE+L     +MKK  D+  +E+ +F+  D+ +     R ++    +  KLAP F GP+ ++++ G   Y L+LP
Subjt:  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLP

P0CT36 Transposon Tf2-3 polyprotein2.4e-4730.83Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQ
        +  E   D +L  ++N   E+   + N Q + G L+  K +++L  ++ L  +++  +H+     H G       +     W G++  +++YV+ C  CQ
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQ

Query:  RNKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWK
         NK++   P G LQP+P      E  +MDFI  LP++ GY+++ VVVDR  KMA  +      TA+Q A  F + +I+  G P  II D D IF S  WK
Subjt:  RNKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWK

Query:  ELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ
        +        +K S  + PQTDGQTER N+ +E  LRC C+  P  W   I   +  YN   H++ +  PF++V+       P  L  + D+   N+    
Subjt:  ELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ

Query:  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLP
          +E   V   +KE+L     +MKK  D+  +E+ +F+  D+ +     R ++    +  KLAP F GP+ ++++ G   Y L+LP
Subjt:  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLP

P0CT41 Transposon Tf2-12 polyprotein2.4e-4730.83Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQ
        +  E   D +L  ++N   E+   + N Q + G L+  K +++L  ++ L  +++  +H+     H G       +     W G++  +++YV+ C  CQ
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQ

Query:  RNKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWK
         NK++   P G LQP+P      E  +MDFI  LP++ GY+++ VVVDR  KMA  +      TA+Q A  F + +I+  G P  II D D IF S  WK
Subjt:  RNKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWK

Query:  ELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ
        +        +K S  + PQTDGQTER N+ +E  LRC C+  P  W   I   +  YN   H++ +  PF++V+       P  L  + D+   N+    
Subjt:  ELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ

Query:  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLP
          +E   V   +KE+L     +MKK  D+  +E+ +F+  D+ +     R ++    +  KLAP F GP+ ++++ G   Y L+LP
Subjt:  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLP

Q9UR07 Transposon Tf2-11 polyprotein2.4e-4730.83Show/hide
Query:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQ
        +  E   D +L  ++N   E+   + N Q + G L+  K +++L  ++ L  +++  +H+     H G       +     W G++  +++YV+ C  CQ
Subjt:  MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQ

Query:  RNKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWK
         NK++   P G LQP+P      E  +MDFI  LP++ GY+++ VVVDR  KMA  +      TA+Q A  F + +I+  G P  II D D IF S  WK
Subjt:  RNKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWK

Query:  ELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ
        +        +K S  + PQTDGQTER N+ +E  LRC C+  P  W   I   +  YN   H++ +  PF++V+       P  L  + D+   N+    
Subjt:  ELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ

Query:  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLP
          +E   V   +KE+L     +MKK  D+  +E+ +F+  D+ +     R ++    +  KLAP F GP+ ++++ G   Y L+LP
Subjt:  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGCGGAAGTAGAAAAGGATGAGGAGCTGCAAGGCATAATTAACATCTTAAAGGAAAACCCAGAAGGAAAAGCAAACTACCAATGGGAATCGGGTAATTTACTCTA
CAAAGGAAGATTAGTTCTGTCAAAAAACTCCACTCTTATTCCATCACTGCTTCACACTTTCCATGACTCGGTGTTAGGGGGTCATTCGGGGTTTCTCAGAACTTATAAGA
GGATGAACGGAGAGATACACTGGATGGGCATGAAAAATGACGTTAAGAAGTATGTAGAACAATGTGAAATCTGTCAAAGGAATAAAACGAAAGCACTAGCTCCGGCGGGA
CTACTGCAGCCATTACCATTACCCAATTTGATCCTTGAAGACTGGACTATGGACTTCATTGAGGGTTTACCTAAGGCTGGAGGATATGACAGTATCATGGTTGTAGTGGA
TCGATTGAAGATGGCCCATTTCATCACCTTGAAACACCCCTTTACGGCGAAACAAGTGGCAGAAAAATTCGTAGAGGAGATCATTAGTAAACATGGAATACCGAATTCAA
TCATAACTGATCGAGACAAGATTTTTTTAAGTCATTTTTGGAAAGAACTATTTACAGCCATGGGGACGTCGTTAAAAAGAAGTACGGCCTTCCACCCGCAAACCGACGGG
CAAACGGAAAGGATAAATCGTTGCCTCGAAACCTACCTACGTTGTTTTTGTAACGAACAGCCCACAAAATGGCATAAGTGTATCCCTTGGGCAGAGTTGTGGTATAACAC
CACTTTCCATGCATCGGTGAAGACAATGCCATTTCAAGTAGTGTATGGCCGACCACCACCACCGCTGGTGCGCTACAAAGACAGGAAATCTAATAACAACAGTGTCGAAC
AGCTGCTGAAGGAAAGGGATTTAGTGATCAGCGCCTTGAAGGAGAATCTATTGATTGCGCAAAATAGAATGAAAAAACAGGCAGATTTACATCGTCGAGAACTGAAATTC
CGGGTAGATGACGTTTATCTGAAGTTGCGCCCCTATAGACAGCGGTCATTAACACGGAAACGTTGTGAAAAATTAGCCCCAAAGTTCTACGGGCCGTACCGTATCATTGA
GGAAATTGGAGAAGTAGCTTACCGTCTAAATCTTCCTCCGAGGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGCGGAAGTAGAAAAGGATGAGGAGCTGCAAGGCATAATTAACATCTTAAAGGAAAACCCAGAAGGAAAAGCAAACTACCAATGGGAATCGGGTAATTTACTCTA
CAAAGGAAGATTAGTTCTGTCAAAAAACTCCACTCTTATTCCATCACTGCTTCACACTTTCCATGACTCGGTGTTAGGGGGTCATTCGGGGTTTCTCAGAACTTATAAGA
GGATGAACGGAGAGATACACTGGATGGGCATGAAAAATGACGTTAAGAAGTATGTAGAACAATGTGAAATCTGTCAAAGGAATAAAACGAAAGCACTAGCTCCGGCGGGA
CTACTGCAGCCATTACCATTACCCAATTTGATCCTTGAAGACTGGACTATGGACTTCATTGAGGGTTTACCTAAGGCTGGAGGATATGACAGTATCATGGTTGTAGTGGA
TCGATTGAAGATGGCCCATTTCATCACCTTGAAACACCCCTTTACGGCGAAACAAGTGGCAGAAAAATTCGTAGAGGAGATCATTAGTAAACATGGAATACCGAATTCAA
TCATAACTGATCGAGACAAGATTTTTTTAAGTCATTTTTGGAAAGAACTATTTACAGCCATGGGGACGTCGTTAAAAAGAAGTACGGCCTTCCACCCGCAAACCGACGGG
CAAACGGAAAGGATAAATCGTTGCCTCGAAACCTACCTACGTTGTTTTTGTAACGAACAGCCCACAAAATGGCATAAGTGTATCCCTTGGGCAGAGTTGTGGTATAACAC
CACTTTCCATGCATCGGTGAAGACAATGCCATTTCAAGTAGTGTATGGCCGACCACCACCACCGCTGGTGCGCTACAAAGACAGGAAATCTAATAACAACAGTGTCGAAC
AGCTGCTGAAGGAAAGGGATTTAGTGATCAGCGCCTTGAAGGAGAATCTATTGATTGCGCAAAATAGAATGAAAAAACAGGCAGATTTACATCGTCGAGAACTGAAATTC
CGGGTAGATGACGTTTATCTGAAGTTGCGCCCCTATAGACAGCGGTCATTAACACGGAAACGTTGTGAAAAATTAGCCCCAAAGTTCTACGGGCCGTACCGTATCATTGA
GGAAATTGGAGAAGTAGCTTACCGTCTAAATCTTCCTCCGAGGCCATAA
Protein sequenceShow/hide protein sequence
MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAG
LLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDG
QTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERDLVISALKENLLIAQNRMKKQADLHRRELKF
RVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPPRP