| GenBank top hits | e value | %identity | Alignment |
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| AQY61295.1 Pol [Coffea arabica] | 6.7e-65 | 76.88 | Show/hide |
Query: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
MDKAH+L+ PMVV+SLD D FRPRE+NEE+LG EVPYLS IGALMYLAN TRPDI+F+VNLLAR+SSSP +RHWNG+KH+ RYL+GTID+ LFYSNKS
Subjt: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
Query: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
+LVGYADA YLSDPHKARSQTGYLFT GGTAISW+S KQ+ SSNHAEI+AIHEAS
Subjt: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
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| KAA0038947.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.7e-74 | 88.75 | Show/hide |
Query: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
MDKAH LNIPMVV+SLDVK DIFRPREDNEELLG EVPYL+ IGALMYLANNTRPDI+FSVNLLARYSSSP KRHWN VKHVLRYLRGTID+ LFYSNKS
Subjt: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
Query: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
NFDLVGYADA YLSDP KARSQTGYLFTCGGTAISW+SVKQT SSNHAEILAIHEAS
Subjt: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
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| KAA0067250.1 Pol [Cucumis melo var. makuwa] | 2.3e-73 | 89.38 | Show/hide |
Query: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
MDKAH LNIPMVV+SLDVK DIFRPREDNEELLG EVPYLS IGALM LANNTRPDIAFSVNLLARYSSSP KRHWNGVKHVLRYLRGTIDMSLFYSNKS
Subjt: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
Query: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
NFDLVGYADA YLSDP KARSQ GYLFT GGTAISW+SVKQT SSNHAEILAIHE S
Subjt: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
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| RVX08899.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.1e-64 | 78.12 | Show/hide |
Query: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
MDKAH L+ PMVV+SLDVKND FRP E +EELLG EVPYLS IGALMYLAN TRPDIAFSVNLLARYSS+P +RHWNG+KH+LRYLRGT DM LFYS +S
Subjt: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
Query: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
L+GYADA YLSDPHK RSQTGY+F C GTAISW+SVKQT SSNH+EILAIHEAS
Subjt: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
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| TYK21506.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.4e-69 | 89.33 | Show/hide |
Query: MVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADA
M+V+SLDVK DIFRPREDNEELLG EVPYLS IGALMYLANNTRPDIAFSVNLLARYS SP KRHWNGVKHVLRYLRGTIDM LFYSNKSNFDLVGYADA
Subjt: MVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADA
Query: RYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
+LSDPHKARSQTGYLFTC GTAISW+SVKQT SSNHAEILAIHEAS
Subjt: RYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2N9FK49 Reverse transcriptase Ty1/copia-type domain-containing protein | 3.8e-66 | 80.62 | Show/hide |
Query: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
MDKAH L+ PMVV+SLDVK D FRP+E EE LG EVPYLS IGALMYLAN TRPDIAFSVNLLARYSS+P RHWNGVKHVLRYLRGT DM LFY NKS
Subjt: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
Query: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
N LVGYADA YLSDPHK RSQTGYLFTCG TAISW+SVKQT SSNH+EI+AIHEAS
Subjt: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
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| A0A2N9J4G7 Reverse transcriptase Ty1/copia-type domain-containing protein | 3.8e-66 | 80.62 | Show/hide |
Query: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
MDKAH L+ PMVV+SLDVK D FRP+E EE LG EVPYLS IGALMYLAN TRPDIAFSVNLLARYSS+P RHWNGVKHVLRYLRGT DM LFY NKS
Subjt: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
Query: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
N LVGYADA YLSDPHK RSQTGYLFTCG TAISW+SVKQT SSNH+EI+AIHEAS
Subjt: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
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| A0A5D3CGU0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-74 | 88.75 | Show/hide |
Query: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
MDKAH LNIPMVV+SLDVK DIFRPREDNEELLG EVPYL+ IGALMYLANNTRPDI+FSVNLLARYSSSP KRHWN VKHVLRYLRGTID+ LFYSNKS
Subjt: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
Query: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
NFDLVGYADA YLSDP KARSQTGYLFTCGGTAISW+SVKQT SSNHAEILAIHEAS
Subjt: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
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| A0A5D3CKU4 Pol | 1.1e-73 | 89.38 | Show/hide |
Query: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
MDKAH LNIPMVV+SLDVK DIFRPREDNEELLG EVPYLS IGALM LANNTRPDIAFSVNLLARYSSSP KRHWNGVKHVLRYLRGTIDMSLFYSNKS
Subjt: MDKAHSLNIPMVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKS
Query: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
NFDLVGYADA YLSDP KARSQ GYLFT GGTAISW+SVKQT SSNHAEILAIHE S
Subjt: NFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
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| A0A5D3DD63 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-69 | 89.33 | Show/hide |
Query: MVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADA
M+V+SLDVK DIFRPREDNEELLG EVPYLS IGALMYLANNTRPDIAFSVNLLARYS SP KRHWNGVKHVLRYLRGTIDM LFYSNKSNFDLVGYADA
Subjt: MVVQSLDVKNDIFRPREDNEELLGLEVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADA
Query: RYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
+LSDPHKARSQTGYLFTC GTAISW+SVKQT SSNHAEILAIHEAS
Subjt: RYLSDPHKARSQTGYLFTCGGTAISWQSVKQTTKVISSNHAEILAIHEAS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.4e-19 | 39.44 | Show/hide |
Query: PREDNEELLGLE----VPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFD--LVGYADARYLSDPHK
P + N ELL + P S IG LMY+ TRPD+ +VN+L+RYSS W +K VLRYL+GTIDM L + F+ ++GY D+ +
Subjt: PREDNEELLGLE----VPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFD--LVGYADARYLSDPHK
Query: ARSQTGYLFTC-GGTAISWQSVKQTTKVISSNHAEILAIHEA
+S TGYLF I W + +Q + SS AE +A+ EA
Subjt: ARSQTGYLFTC-GGTAISWQSVKQTTKVISSNHAEILAIHEA
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| P0CV72 Secreted RxLR effector protein 161 | 2.1e-24 | 44.35 | Show/hide |
Query: VPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISW
VPYLS +GA+MYL TRPD+A +V +L++++S P HW +K VLRYL+ T L ++ LVGY+DA + D RS +GYLF G +SW
Subjt: VPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISW
Query: QSVKQTTKVISSNHAEILAIHEAS
+S KQ T +SS E +A+ EA+
Subjt: QSVKQTTKVISSNHAEILAIHEAS
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-21 | 46.34 | Show/hide |
Query: EVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGYLFTCGGTAIS
+VPY S +G+LMY TRPDIA +V +++R+ +P K HW VK +LRYLRGT L + S+ L GY DA D +S TGYLFT G AIS
Subjt: EVPYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGYLFTCGGTAIS
Query: WQSVKQTTKVISSNHAEILAIHE
WQS Q +S+ AE +A E
Subjt: WQSVKQTTKVISSNHAEILAIHE
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| P25600 Putative transposon Ty5-1 protein YCL074W | 9.0e-12 | 34.43 | Show/hide |
Query: PYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQ
PY S +G L++ AN RPDI++ V+LL+R+ P H + VLRYL T M L Y + S L Y DA + + S GY+ G ++W
Subjt: PYLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQ
Query: SVKQTTKV-ISSNHAEILAIHE
S K + + S AE + E
Subjt: SVKQTTKV-ISSNHAEILAIHE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.2e-17 | 39.84 | Show/hide |
Query: YLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQS
Y +G+L YLA TRPD++++VN L++Y P HWN +K VLRYL GT D +F + L Y+DA + D S GY+ G ISW S
Subjt: YLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQS
Query: VKQTTKVISSNHAEILAIHEAST
KQ V SS AE ++ S+
Subjt: VKQTTKVISSNHAEILAIHEAST
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 3.6e-16 | 39.34 | Show/hide |
Query: YLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQS
Y IG LMYL TR DI+F+VN L+++S +P H V +L Y++GT+ LFYS+++ L ++DA + S RS GY G + ISW+S
Subjt: YLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQS
Query: VKQTTKVISSNHAEILAIHEAS
KQ SS AE A+ A+
Subjt: VKQTTKVISSNHAEILAIHEAS
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 1.7e-10 | 41.77 | Show/hide |
Query: MYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGY
MYL TRPD+ F+VN L+++SS+ V VL Y++GT+ LFYS S+ L +AD+ + S P RS TG+
Subjt: MYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGY
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 5.4e-12 | 33.05 | Show/hide |
Query: YLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQS
+ S +GAL YL TRPDI+++VN++ + P ++ +K VLRY++GTI L+ S ++ + D+ + RS TG+ G ISW +
Subjt: YLSPIGALMYLANNTRPDIAFSVNLLARYSSSPIKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADARYLSDPHKARSQTGYLFTCGGTAISWQS
Query: VKQTTKVISSNHAEILAI
+Q T SS E A+
Subjt: VKQTTKVISSNHAEILAI
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