CuGenDBv2

Gene ID	Cmc06g0160231
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cytochrome c biogenesis B
Genome location	CMiso1.1chr06:8527377..8527622
RNA-Seq Expression	Cmc06g0160231
Synteny	Cmc06g0160231
Gene Ontology terms	GO:0015886 - heme transport (biological process) GO:0017004 - cytochrome complex assembly (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016020 - membrane (cellular component) GO:0015232 - heme transporter activity (molecular function)
InterPro domains	IPR003544 - Cytochrome c-type biogenesis protein CcmB

Homology

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GenBank top hits

e value

%identity

Alignment

AEN56106.1 cytochrome c biogenesis B [Cucumis melo subsp. melo]

1.6e-38

97.53

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Query:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
        MR+LFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLG IRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
Subjt:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA

QDH82080.1 cytochrome c biogenesis B [Broussonetia luzonica]

1.3e-37

95.06

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Query:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
        MR+LFL LYHK+IFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLG IRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
Subjt:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA

YP_004849329.1 cytochrome c biogenesis B [Cucumis sativus]

4.6e-38

96.3

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Query:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
        MR+LFL LYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLG IRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
Subjt:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA

YP_009522824.1 cytochrome c biogenesis B [Styphnolobium japonicum]

1.3e-37

95.06

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Query:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
        MR+LFL LYHKRIFPSTPITSFSPFLSYIVVTPL+LGFEKDFSCHSHLG IRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
Subjt:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA

YP_009913630.1 cytochrome c biogenesis B [Luffa acutangula]

1.6e-38

97.53

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Query:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
        MR+LFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLG IRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
Subjt:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA

TrEMBL top hits

e value

%identity

Alignment

A0A142BZ22 Cytochrome c biogenesis B

6.5e-38

95.06

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Query:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
        MR+LFL LYHK+IFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLG IRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
Subjt:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA

A0A3Q9CS08 Cytochrome c biogenesis B

7.7e-39

97.53

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Query:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
        MR+LFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLG IRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
Subjt:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA

A0A7D6C7C3 Cytochrome c biogenesis B

7.7e-39

97.53

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Query:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
        MR+LFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLG IRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
Subjt:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA

G3EIY1 Cytochrome c biogenesis B

2.2e-38

96.3

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Query:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
        MR+LFL LYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLG IRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
Subjt:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA

G3EU22 Cytochrome c biogenesis B

7.7e-39

97.53

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Query:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
        MR+LFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLG IRIPPLFPFPPAPFPRNEKEDGTLELYYLSA
Subjt:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA

SwissProt top hits

e value

%identity

Alignment

P38454 Putative cytochrome c biogenesis ccmB-like mitochondrial protein

7.2e-18

61.25

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Query:  QLFLSLYHKRIF--PSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLS
        ++FL L+++ I    ST IT+FS FL YIVVTPLM+GF KDF CH HLG I I  LF F P  F +N+ EDGTLELYYLS
Subjt:  QLFLSLYHKRIF--PSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLS

P93280 Putative cytochrome c biogenesis ccmB-like mitochondrial protein

9.4e-26

76.25

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Query:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLS
        MR+LF  LY+K IF STPITSFS FL YIVVTPLMLGFEKDF CH HLG I I  LF F  A F RNEKEDGTLELYYLS
Subjt:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLS

Arabidopsis top hits

e value

%identity

Alignment

ATMG00110.1 cytochrome C biogenesis 206

5.8e-39

92.5

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Query:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLS
        MR+LFL LYHK IF STPITSFS FLSYIVVTPLMLGFEKDFSCHSHLG IRIPPLFPFPPAPFPRNEKEDGTLELYYLS
Subjt:  MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLS

Sequences

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CDS sequence

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ATGAGACAACTCTTTCTTTCACTATATCATAAACGGATCTTCCCCTCCACACCAATCACGAGTTTTTCTCCATTCCTCTCGTATATCGTCGTCACACCCTTAATGCTAGG
TTTTGAAAAAGACTTTTCATGTCATTCCCATTTAGGTTCGATTCGGATCCCTCCGTTGTTTCCTTTTCCTCCCGCACCTTTTCCTCGAAATGAGAAAGAAGATGGTACAC
TCGAATTGTATTATTTAAGTGCTTAA

mRNA sequence

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Protein sequence

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MRQLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGSIRIPPLFPFPPAPFPRNEKEDGTLELYYLSA

Cmc06g0160231 (gene) of Melon (Charmono) v1.1 genome