; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0160421 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0160421
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationCMiso1.1chr06:8751204..8753681
RNA-Seq ExpressionCmc06g0160421
SyntenyCmc06g0160421
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0007275 - multicellular organism development (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0016874 - ligase activity (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013010 - Zinc finger, SIAH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR018121 - Seven-in-absentia protein, TRAF-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33741.1 ubiquitin ligase [Cucumis melo subsp. melo]2.0e-123100Show/hide
Query:  CVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR
        CVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR
Subjt:  CVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR

Query:  QELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVEN
        QELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVEN
Subjt:  QELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVEN

Query:  ATWMLTV
        ATWMLTV
Subjt:  ATWMLTV

TYK29183.1 E3 ubiquitin-protein ligase SINAT5 [Cucumis melo var. makuwa]1.1e-12699.53Show/hide
Query:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
        MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
Subjt:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH

Query:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS
        NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIP LVAHLRDDHKVDMHTGCTFNHRYVKS
Subjt:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS

Query:  NPREVENATWMLTV
        NPREVENATWMLTV
Subjt:  NPREVENATWMLTV

XP_008466822.1 PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Cucumis melo]3.9e-127100Show/hide
Query:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
        MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
Subjt:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH

Query:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS
        NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS
Subjt:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS

Query:  NPREVENATWMLTV
        NPREVENATWMLTV
Subjt:  NPREVENATWMLTV

XP_011651326.1 E3 ubiquitin-protein ligase SINAT5 [Cucumis sativus]4.3e-12698.6Show/hide
Query:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
        MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNN+AVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
Subjt:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH

Query:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS
        NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSA+GDIP LVAHLRDDHKVDMHTGCTFNHRYVKS
Subjt:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS

Query:  NPREVENATWMLTV
        NPREVENATWMLTV
Subjt:  NPREVENATWMLTV

XP_038891628.1 E3 ubiquitin-protein ligase SINAT5 [Benincasa hispida]1.5e-11893.93Show/hide
Query:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
        MDLDSIECVSSSDGLDEDEIHLHHTLHPYS SHHHPELSA+KPR GNNN+ +   PTATAPAT+VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
Subjt:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH

Query:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS
        NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHE LCNYRPYSCPYAGSECSA+GDIP LVAHLRDDHKVDMHTGCTFNHRYVKS
Subjt:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS

Query:  NPREVENATWMLTV
        NPREVENATWMLTV
Subjt:  NPREVENATWMLTV

TrEMBL top hitse value%identityAlignment
A0A0A0LAJ0 RING-type E3 ubiquitin transferase2.1e-12698.6Show/hide
Query:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
        MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNN+AVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
Subjt:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH

Query:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS
        NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSA+GDIP LVAHLRDDHKVDMHTGCTFNHRYVKS
Subjt:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS

Query:  NPREVENATWMLTV
        NPREVENATWMLTV
Subjt:  NPREVENATWMLTV

A0A1S3CS58 RING-type E3 ubiquitin transferase1.9e-127100Show/hide
Query:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
        MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
Subjt:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH

Query:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS
        NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS
Subjt:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS

Query:  NPREVENATWMLTV
        NPREVENATWMLTV
Subjt:  NPREVENATWMLTV

A0A5A7U8K1 RING-type E3 ubiquitin transferase1.9e-127100Show/hide
Query:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
        MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
Subjt:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH

Query:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS
        NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS
Subjt:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS

Query:  NPREVENATWMLTV
        NPREVENATWMLTV
Subjt:  NPREVENATWMLTV

A0A5D3DZJ6 RING-type E3 ubiquitin transferase5.4e-12799.53Show/hide
Query:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
        MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
Subjt:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH

Query:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS
        NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIP LVAHLRDDHKVDMHTGCTFNHRYVKS
Subjt:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS

Query:  NPREVENATWMLTV
        NPREVENATWMLTV
Subjt:  NPREVENATWMLTV

E5GB99 RING-type E3 ubiquitin transferase9.6e-124100Show/hide
Query:  CVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR
        CVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR
Subjt:  CVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR

Query:  QELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVEN
        QELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVEN
Subjt:  QELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVEN

Query:  ATWMLTV
        ATWMLTV
Subjt:  ATWMLTV

SwissProt top hitse value%identityAlignment
Q10L91 E3 ubiquitin-protein ligase DIS11.4e-7473.14Show/hide
Query:  TAVNGGPTATAPATN------VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYY
        T + G P   +P  N      V ELLECPVC ++MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IRCLALEKVA SLELPCKY + GC  I+PYY
Subjt:  TAVNGGPTATAPATN------VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYY

Query:  SKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVSLIF
         KLKHE  C YRPYSCPYAGSEC+  GDIP LV HL+DDHKVDMH GCTFNHRYVKSNP EVENATWMLTV   F
Subjt:  SKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVSLIF

Q84JL3 E3 ubiquitin-protein ligase SINAT36.5e-9374.88Show/hide
Query:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAP-ATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRV
        MDLDS++C S+ D  D++EIH     +     HHH           NN T VN   +   P  T+VHELLECPVCTNSMYPPIHQCHNGHTLCSTCK RV
Subjt:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAP-ATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRV

Query:  HNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVK
        HNRCPTCRQELGDIRCLALEKVAESLELPCK+ SLGC EIFPYYSKLKHE +CN+RPYSCPYAGSECS  GDIP LVAHLRDDHKVDMH+GCTFNHRYVK
Subjt:  HNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVK

Query:  SNPREVENATWMLTV
        SNPREVENATWMLTV
Subjt:  SNPREVENATWMLTV

Q8S3N1 E3 ubiquitin-protein ligase SINAT52.2e-8871.56Show/hide
Query:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH
        M+ DSI+ V     +D+DEIH  H            + S++K +         G     +PAT+V+ELLECPVCTNSMYPPIHQCHNGHTLCSTCK+RVH
Subjt:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVH

Query:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS
        NRCPTCRQELGDIRCLALEKVAESLELPCKYY+LGC  IFPYYSKLKHE  CN+RPYSCPYAGSEC+A+GDI  LVAHLRDDHKVDMHTGCTFNHRYVKS
Subjt:  NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKS

Query:  NPREVENATWMLTVSLIF
        NPREVENATWMLTV   F
Subjt:  NPREVENATWMLTVSLIF

Q9M2P4 E3 ubiquitin-protein ligase SINAT21.8e-7470.88Show/hide
Query:  ELSASKPRYGNNNTAVNG----GPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY
        E+  +K    NN     G    G         V+ELLECPVCTN MYPPIHQC NGHTLCS CK RV N CPTCR ELG+IRCLALEKVAESLE+PC+Y 
Subjt:  ELSASKPRYGNNNTAVNG----GPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY

Query:  SLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV
        +LGC +IFPYYSKLKHE  C +RPY+CPYAGSECS  GDIP LV HL+DDHKVDMH GCTFNHRYVKSNP EVENATWMLTV
Subjt:  SLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV

Q9STN8 E3 ubiquitin-protein ligase SINAT41.3e-9073.73Show/hide
Query:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNG---GPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKT
        M+ DS+ECVSS+           + +H     H   + S++K   G    AV     GPTATAPAT+V+ELLECPVCT SMYPPIHQCHNGHTLCSTCK 
Subjt:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNG---GPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKT

Query:  RVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRY
        RVHNRCPTCRQELGDIRCLALEKVAESLELPCK+Y+LGC EIFPYYSKLKHE LCN+RPYSCPYAGSEC  +GDIP LVAHLRDDHKVDMH G TFNHRY
Subjt:  RVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRY

Query:  VKSNPREVENATWMLTV
        VKSNPREVENATWMLTV
Subjt:  VKSNPREVENATWMLTV

Arabidopsis top hitse value%identityAlignment
AT2G41980.1 Protein with RING/U-box and TRAF-like domains6.2e-7571.51Show/hide
Query:  ELSASKPRYGNNNTAVNGGPTATAPATN-VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLG
        E+  +K    +  T    G      ++N V+ELLECPVCTN MYPPIHQC NGHTLCS+CK RV N CPTCR ELG+IRCLALEKVAESLE+PC+Y +LG
Subjt:  ELSASKPRYGNNNTAVNGGPTATAPATN-VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLG

Query:  CTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV
        C +IFPYYSKLKHE  C +R YSCPYAGSECS  GDIP LV HL+DDHKVDMH GCTFNHRYVKSNP EVENATWMLTV
Subjt:  CTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV

AT3G58040.1 seven in absentia of Arabidopsis 21.3e-7570.88Show/hide
Query:  ELSASKPRYGNNNTAVNG----GPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY
        E+  +K    NN     G    G         V+ELLECPVCTN MYPPIHQC NGHTLCS CK RV N CPTCR ELG+IRCLALEKVAESLE+PC+Y 
Subjt:  ELSASKPRYGNNNTAVNG----GPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY

Query:  SLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV
        +LGC +IFPYYSKLKHE  C +RPY+CPYAGSECS  GDIP LV HL+DDHKVDMH GCTFNHRYVKSNP EVENATWMLTV
Subjt:  SLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV

AT3G61790.1 Protein with RING/U-box and TRAF-like domains4.6e-9474.88Show/hide
Query:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAP-ATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRV
        MDLDS++C S+ D  D++EIH     +     HHH           NN T VN   +   P  T+VHELLECPVCTNSMYPPIHQCHNGHTLCSTCK RV
Subjt:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAP-ATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRV

Query:  HNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVK
        HNRCPTCRQELGDIRCLALEKVAESLELPCK+ SLGC EIFPYYSKLKHE +CN+RPYSCPYAGSECS  GDIP LVAHLRDDHKVDMH+GCTFNHRYVK
Subjt:  HNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVK

Query:  SNPREVENATWMLTV
        SNPREVENATWMLTV
Subjt:  SNPREVENATWMLTV

AT4G27880.1 Protein with RING/U-box and TRAF-like domains9.6e-9273.73Show/hide
Query:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNG---GPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKT
        M+ DS+ECVSS+           + +H     H   + S++K   G    AV     GPTATAPAT+V+ELLECPVCT SMYPPIHQCHNGHTLCSTCK 
Subjt:  MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNG---GPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKT

Query:  RVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRY
        RVHNRCPTCRQELGDIRCLALEKVAESLELPCK+Y+LGC EIFPYYSKLKHE LCN+RPYSCPYAGSEC  +GDIP LVAHLRDDHKVDMH G TFNHRY
Subjt:  RVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRY

Query:  VKSNPREVENATWMLTV
        VKSNPREVENATWMLTV
Subjt:  VKSNPREVENATWMLTV

AT5G53360.1 TRAF-like superfamily protein2.2e-5186.41Show/hide
Query:  LALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVS
        +ALEKVAESLELPCKYY+LGC  IFPYYSKLKHE  CN+RPYSCPYAGSEC+A+GDI  LVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTV 
Subjt:  LALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVS

Query:  LIF
          F
Subjt:  LIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGGATAGTATTGAGTGTGTATCGTCTTCTGATGGTCTCGATGAGGATGAGATTCATCTGCACCACACCCTTCATCCTTATTCCCAATCTCATCATCATCCCGA
GTTGTCCGCATCTAAGCCTCGTTATGGAAACAATAATACCGCTGTGAACGGTGGTCCCACTGCAACTGCGCCGGCAACTAACGTTCATGAATTGCTGGAATGCCCTGTGT
GTACTAATTCTATGTACCCTCCCATCCATCAGTGCCACAATGGACATACCTTATGTTCCACATGTAAAACGAGAGTTCATAACCGGTGCCCAACTTGTAGACAAGAGCTT
GGAGATATTAGGTGCTTGGCACTGGAGAAGGTGGCAGAGTCACTTGAATTGCCTTGCAAGTATTATTCATTGGGTTGCACTGAGATATTTCCATACTACAGTAAACTTAA
GCATGAGGGTTTGTGCAACTACAGACCCTATAGTTGTCCATATGCTGGGTCAGAATGCTCTGCTATTGGGGACATTCCTTTGCTTGTTGCACATCTGAGGGACGATCATA
AGGTGGACATGCACACTGGCTGCACATTTAACCATCGCTATGTTAAGTCCAATCCAAGGGAAGTGGAGAATGCCACTTGGATGCTTACTGTAAGTTTGATATTTTTTACC
TTAACTCTCAAATGA
mRNA sequenceShow/hide mRNA sequence
TCTATAGTTGTCCAAACCAATATCTTGGCCTTGGCATATCAATTTTTACTCATCAAAGAACCGAATCAACGGTGCCATTATTAGCTCACGCTCTCTCTCTTACTCTCTTT
CTCTCTTTCTCACACACACTTCAAAGACCTCAGAACAAGAGAGGAACAACACAAAGGGGTTAGAGGAACCAAGTAAAGAACCTCTTTTTTCGGGTTAAAAGGGCTTATTC
CCTTCTGGGTATCCATCAAATCAATCATCCTTTTTTTCCCTTTTCATTCTTTGCTTCTTTCCTACTCTGCCAAACCCAGAAATTTTTCTGAGGTCTCGATCGATTCTAGA
TTTGGATAAGTGGGTTCTTGTTTTCAGTTCTATAGGGTTTCTTTTTCTGTAAATGGATTTGGATAGTATTGAGTGTGTATCGTCTTCTGATGGTCTCGATGAGGATGAGA
TTCATCTGCACCACACCCTTCATCCTTATTCCCAATCTCATCATCATCCCGAGTTGTCCGCATCTAAGCCTCGTTATGGAAACAATAATACCGCTGTGAACGGTGGTCCC
ACTGCAACTGCGCCGGCAACTAACGTTCATGAATTGCTGGAATGCCCTGTGTGTACTAATTCTATGTACCCTCCCATCCATCAGTGCCACAATGGACATACCTTATGTTC
CACATGTAAAACGAGAGTTCATAACCGGTGCCCAACTTGTAGACAAGAGCTTGGAGATATTAGGTGCTTGGCACTGGAGAAGGTGGCAGAGTCACTTGAATTGCCTTGCA
AGTATTATTCATTGGGTTGCACTGAGATATTTCCATACTACAGTAAACTTAAGCATGAGGGTTTGTGCAACTACAGACCCTATAGTTGTCCATATGCTGGGTCAGAATGC
TCTGCTATTGGGGACATTCCTTTGCTTGTTGCACATCTGAGGGACGATCATAAGGTGGACATGCACACTGGCTGCACATTTAACCATCGCTATGTTAAGTCCAATCCAAG
GGAAGTGGAGAATGCCACTTGGATGCTTACTGTAAGTTTGATATTTTTTACCTTAACTCTCAAATGATTCTCGTTCTCTCCTTTTTCATAGCACTTGCTTCTTGAATTGA
TACTTATGATACATTATATGCACGCTTGTGTATGTATGCTTAGGTAAATATGTATGTATGTATCAGTTATTTCACT
Protein sequenceShow/hide protein sequence
MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQEL
GDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVSLIFFT
LTLK