; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0160601 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0160601
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr06:8948019..8948753
RNA-Seq ExpressionCmc06g0160601
SyntenyCmc06g0160601
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031392147.1 uncharacterized protein LOC116204210 [Punica granatum]3.4e-10070.08Show/hide
Query:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ
        MKE+LKL D  IIY + DS WVSPIHVVPKKT +T+VKNE+GE+VP R+QNGWR+CI Y KLN  T+KDHFPL F+DQM++RLAG+SYFCFLD +SG+YQ
Subjt:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ

Query:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGL +APGTFQRCMMSIF D IE CIEVFMDDFTV+G+SFD CLA+L  +L+R IE+NLVLNYEKCHFMV+HGI
Subjt:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI

Query:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR
        VLGH++SS+ IEVDK K+D++    YP+ ++ +RSFL  AGFYR
Subjt:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR

XP_031392309.1 uncharacterized protein LOC116204368 [Punica granatum]1.2e-10070.49Show/hide
Query:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ
        MKE+LKL D  IIY + DS WVSPIHVVPKKT +T+VKNE+GE+VP R+QNGWR+CI Y KLN  T+KDHFPL F+DQM++RLAG+SYFCFLD +SG+YQ
Subjt:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ

Query:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGL +APGTFQRCMMSIF D IE CIEVFMDDFTVYG+SFD CLA+L  +L+R IE+NLVLNYEKCHFMV+HGI
Subjt:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI

Query:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR
        VLGH++SS+ IEVDK K+D++    YP+ ++ +RSFL  AGFYR
Subjt:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR

XP_031393661.1 uncharacterized protein LOC116205261 [Punica granatum]3.4e-10070.08Show/hide
Query:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ
        MKE+LKL D  IIY + DS WVSPIHVVPKKT +T+VKNE+GE+VP R+QNGWR+CI Y KLN  T+KDHFPL F+DQM++RLAG+SYFCFLD +SG+YQ
Subjt:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ

Query:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGL +APGTFQRCMMSIF D IE CIEVFMDDFTV+G+SFD CLA+L  +L+R IE+NLVLNYEKCHFMV+HGI
Subjt:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI

Query:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR
        VLGH++SS+ IEVDK K+D++    YP+ ++ +RSFL  AGFYR
Subjt:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR

XP_031400978.1 uncharacterized protein LOC116210952 [Punica granatum]1.7e-9969.67Show/hide
Query:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ
        MKE+LKL D  IIY + DS WVSPIHVVPKKT +T+VKNE+GE+VP R+QNGWR+CI Y KLN  T+KDHFPL F+DQM++RLA +SYFCFLD +SG+YQ
Subjt:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ

Query:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGL +APGTFQRCMMSIF D IE CIEVFMDDFTV+G+SFD CLA+L  +L+R IE+NLVLNYEKCHFMV+HGI
Subjt:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI

Query:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR
        VLGH++SS+ IEVDK K+D++    YP+ ++ +RSFL  AGFYR
Subjt:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR

XP_031402684.1 uncharacterized protein LOC116212259 [Punica granatum]3.4e-10070.08Show/hide
Query:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ
        MKE+LKL D  IIY + DS WVSPIHVVPKKT +T+VKNE+GE+VP R+QNGWR+CI Y KLN  T+KDHFPL F+DQM++RLAG+SYFCFLD +SG+YQ
Subjt:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ

Query:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGL +APGTFQRCMMSIF D IE CIEVFMDDFTV+G+SFD CLA+L  +L+R IE+NLVLNYEKCHFMV+HGI
Subjt:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI

Query:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR
        VLGH++SS+ IEVDK K+D++    YP+ ++ +RSFL  AGFYR
Subjt:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR

TrEMBL top hitse value%identityAlignment
A0A6P8D4X0 Reverse transcriptase1.6e-10070.08Show/hide
Query:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ
        MKE+LKL D  IIY + DS WVSPIHVVPKKT +T+VKNE+GE+VP R+QNGWR+CI Y KLN  T+KDHFPL F+DQM++RLAG+SYFCFLD +SG+YQ
Subjt:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ

Query:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGL +APGTFQRCMMSIF D IE CIEVFMDDFTV+G+SFD CLA+L  +L+R IE+NLVLNYEKCHFMV+HGI
Subjt:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI

Query:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR
        VLGH++SS+ IEVDK K+D++    YP+ ++ +RSFL  AGFYR
Subjt:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR

A0A6P8DCT8 Reverse transcriptase5.6e-10170.49Show/hide
Query:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ
        MKE+LKL D  IIY + DS WVSPIHVVPKKT +T+VKNE+GE+VP R+QNGWR+CI Y KLN  T+KDHFPL F+DQM++RLAG+SYFCFLD +SG+YQ
Subjt:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ

Query:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGL +APGTFQRCMMSIF D IE CIEVFMDDFTVYG+SFD CLA+L  +L+R IE+NLVLNYEKCHFMV+HGI
Subjt:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI

Query:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR
        VLGH++SS+ IEVDK K+D++    YP+ ++ +RSFL  AGFYR
Subjt:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR

A0A6P8DJV3 Reverse transcriptase1.6e-10070.08Show/hide
Query:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ
        MKE+LKL D  IIY + DS WVSPIHVVPKKT +T+VKNE+GE+VP R+QNGWR+CI Y KLN  T+KDHFPL F+DQM++RLAG+SYFCFLD +SG+YQ
Subjt:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ

Query:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGL +APGTFQRCMMSIF D IE CIEVFMDDFTV+G+SFD CLA+L  +L+R IE+NLVLNYEKCHFMV+HGI
Subjt:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI

Query:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR
        VLGH++SS+ IEVDK K+D++    YP+ ++ +RSFL  AGFYR
Subjt:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR

A0A6P8E7C5 Reverse transcriptase8.1e-10069.67Show/hide
Query:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ
        MKE+LKL D  IIY + DS WVSPIHVVPKKT +T+VKNE+GE+VP R+QNGWR+CI Y KLN  T+KDHFPL F+DQM++RLA +SYFCFLD +SG+YQ
Subjt:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ

Query:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGL +APGTFQRCMMSIF D IE CIEVFMDDFTV+G+SFD CLA+L  +L+R IE+NLVLNYEKCHFMV+HGI
Subjt:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI

Query:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR
        VLGH++SS+ IEVDK K+D++    YP+ ++ +RSFL  AGFYR
Subjt:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR

A0A6P8E830 Reverse transcriptase1.6e-10070.08Show/hide
Query:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ
        MKE+LKL D  IIY + DS WVSPIHVVPKKT +T+VKNE+GE+VP R+QNGWR+CI Y KLN  T+KDHFPL F+DQM++RLAG+SYFCFLD +SG+YQ
Subjt:  MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQ

Query:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGL +APGTFQRCMMSIF D IE CIEVFMDDFTV+G+SFD CLA+L  +L+R IE+NLVLNYEKCHFMV+HGI
Subjt:  IPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGI

Query:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR
        VLGH++SS+ IEVDK K+D++    YP+ ++ +RSFL  AGFYR
Subjt:  VLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.63.2e-3737.5Show/hide
Query:  IYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQIPIACEDQKKTT
        I    +S + SPI VVPKK      ++  G       +  +RI I Y KLNE+T  D  P+  +D+++ +L   +YF  +D   GF+QI +  E   KT 
Subjt:  IYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQIPIACEDQKKTT

Query:  FTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGIVLGHLVSSKEIE
        F+  +G Y + RMPFGL NAP TFQRCM  I    + K   V++DD  V+  S D  L SL L+  +  + NL L  +KC F+      LGH+++   I+
Subjt:  FTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGIVLGHLVSSKEIE

Query:  VDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR
         + EKI+ +QK+  PT  K++++FL   G+YR
Subjt:  VDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR

P10394 Retrovirus-related Pol polyprotein from transposon 4123.9e-2734.8Show/hide
Query:  STWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQIPIACEDQKKTTFTCDYG
        S + SP+ +VPKK+             P   +  WR+ I Y ++N+    D FPL  +D ++ +L    YF  LD  SGF+QI +    +  T+F+   G
Subjt:  STWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQIPIACEDQKKTTFTCDYG

Query:  TYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKC-IEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGIVLGHLVSSKEIEVDKEK
        +Y F R+PFGL  AP +FQR MM+I F  IE     ++MDD  V G S    L +L  +  +  E NL L+ EKC F +     LGH  + K I  D +K
Subjt:  TYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKC-IEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGIVLGHLVSSKEIEVDKEK

Query:  IDIMQKFSYPTCLKDVRSFLSSAGFYR
         D++Q +  P      R F++   +YR
Subjt:  IDIMQKFSYPTCLKDVRSFLSSAGFYR

P20825 Retrovirus-related Pol polyprotein from transposon 2975.7e-3433.46Show/hide
Query:  KEVLKLKDARIIYHVLDSTWVSPIHVVP---KKTRITIVKNEKGEM-------------------VPMRMQ----NGWRICIYYWKLNEVTKKDHFPLHF
        KE  KL     I HVL++T  SPI+       +T    V+N+  EM                   VP +      N +R+ I Y KLNE+T  D +P+  
Subjt:  KEVLKLKDARIIYHVLDSTWVSPIHVVP---KKTRITIVKNEKGEM-------------------VPMRMQ----NGWRICIYYWKLNEVTKKDHFPLHF

Query:  LDQMIKRLAGRSYFCFLDEFSGFYQIPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLEL
        +D+++ +L    YF  +D   GF+QI +  E   KT F+   G Y + RMPFGL NAP TFQRCM +I    + K   V++DD  ++  S    L S++L
Subjt:  LDQMIKRLAGRSYFCFLDEFSGFYQIPIACEDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLEL

Query:  ILNRYIETNLVLNYEKCHFMVSHGIVLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR
        +  +  + NL L  +KC F+      LGH+V+   I+ +  K+  +  +  PT  K++R+FL   G+YR
Subjt:  ILNRYIETNLVLNYEKCHFMVSHGIVLGHLVSSKEIEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus1.4e-2933.48Show/hide
Query:  DSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQIPIACEDQKKTTFTCDY
        +S + SPI +VPKK +        GE         +R+ + + +LN VT  D +P+  ++  +  L    YF  LD  SGF+QI +   D  KT F+   
Subjt:  DSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQIPIACEDQKKTTFTCDY

Query:  GTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGIVLGHLVSSKEIEVDKEK
        G Y F R+PFGL NAP  FQR +  I  + I K   V++DD  V+   +D    +L L+L    + NL +N EK HF+ +    LG++V++  I+ D +K
Subjt:  GTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGIVLGHLVSSKEIEVDKEK

Query:  IDIMQKFSYPTCLKDVRSFLSSAGFYR
        +  + +   PT +K+++ FL    +YR
Subjt:  IDIMQKFSYPTCLKDVRSFLSSAGFYR

Q99315 Transposon Ty3-G Gag-Pol polyprotein6.7e-2729.91Show/hide
Query:  RIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQIPIACEDQKK
        +I+  +LD+ ++ P    P  + + +V  + G          +R+C+ Y  LN+ T  D FPL  +D ++ R+     F  LD  SG++QIP+  +D+ K
Subjt:  RIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQIPIACEDQKK

Query:  TTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGIVLGHLVSSKE
        T F    G Y +  MPFGL NAP TF R M   F D   + + V++DD  ++  S +     L+ +L R    NL++  +KC F       LG+ +  ++
Subjt:  TTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGIVLGHLVSSKE

Query:  IEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR
        I   + K   ++ F  P  +K  + FL    +YR
Subjt:  IEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAGGTACTAAAGCTAAAAGATGCCAGAATTATCTACCATGTCCTGGATAGTACATGGGTAAGTCCAATTCATGTGGTCCCAAAAAAGACTAGGATAACC
ATTGTAAAGAACGAAAAAGGTGAGATGGTTCCGATGCGAATGCAAAATGGTTGGAGAATCTGCATCTATTACTGGAAACTCAATGAGGTAACAAAAAAGGATCAT
TTCCCCTTACATTTTCTTGATCAAATGATAAAACGCTTAGCGGGTAGATCATATTTTTGTTTCTTAGATGAATTTTCTGGTTTTTATCAAATTCCTATAGCATGT
GAAGACCAAAAGAAAACAACTTTTACTTGTGATTATGGAACTTATGCATTTAGGCGTATGCCATTTGGTCTTTTTAATGCACCGGGCACATTCCAACGTTGCATG
ATGAGCATATTTTTCGACTTTATTGAAAAATGTATTGAAGTTTTCATGGATGATTTTACAGTTTATGGTAATAGTTTTGATGCATGTTTAGCTAGTCTAGAATTA
ATTCTAAATAGATACATAGAAACTAACCTTGTCTTGAATTATGAAAAGTGTCATTTCATGGTGTCTCATGGTATAGTTTTAGGACACTTAGTGTCTTCAAAAGAA
ATAGAGGTAGATAAAGAAAAAATTGACATTATGCAAAAATTTTCATATCCAACATGTTTAAAAGATGTTAGATCCTTCCTTAGCAGTGCCGGCTTTTATAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAGGTACTAAAGCTAAAAGATGCCAGAATTATCTACCATGTCCTGGATAGTACATGGGTAAGTCCAATTCATGTGGTCCCAAAAAAGACTAGGATAACC
ATTGTAAAGAACGAAAAAGGTGAGATGGTTCCGATGCGAATGCAAAATGGTTGGAGAATCTGCATCTATTACTGGAAACTCAATGAGGTAACAAAAAAGGATCAT
TTCCCCTTACATTTTCTTGATCAAATGATAAAACGCTTAGCGGGTAGATCATATTTTTGTTTCTTAGATGAATTTTCTGGTTTTTATCAAATTCCTATAGCATGT
GAAGACCAAAAGAAAACAACTTTTACTTGTGATTATGGAACTTATGCATTTAGGCGTATGCCATTTGGTCTTTTTAATGCACCGGGCACATTCCAACGTTGCATG
ATGAGCATATTTTTCGACTTTATTGAAAAATGTATTGAAGTTTTCATGGATGATTTTACAGTTTATGGTAATAGTTTTGATGCATGTTTAGCTAGTCTAGAATTA
ATTCTAAATAGATACATAGAAACTAACCTTGTCTTGAATTATGAAAAGTGTCATTTCATGGTGTCTCATGGTATAGTTTTAGGACACTTAGTGTCTTCAAAAGAA
ATAGAGGTAGATAAAGAAAAAATTGACATTATGCAAAAATTTTCATATCCAACATGTTTAAAAGATGTTAGATCCTTCCTTAGCAGTGCCGGCTTTTATAGATGA
Protein sequenceShow/hide protein sequence
MKEVLKLKDARIIYHVLDSTWVSPIHVVPKKTRITIVKNEKGEMVPMRMQNGWRICIYYWKLNEVTKKDHFPLHFLDQMIKRLAGRSYFCFLDEFSGFYQIPIAC
EDQKKTTFTCDYGTYAFRRMPFGLFNAPGTFQRCMMSIFFDFIEKCIEVFMDDFTVYGNSFDACLASLELILNRYIETNLVLNYEKCHFMVSHGIVLGHLVSSKE
IEVDKEKIDIMQKFSYPTCLKDVRSFLSSAGFYR