; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0160681 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0160681
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRNA-binding protein 2-like isoform X2
Genome locationCMiso1.1chr06:9042164..9048082
RNA-Seq ExpressionCmc06g0160681
SyntenyCmc06g0160681
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146235.1 RNA-binding protein 2 isoform X2 [Cucumis sativus]4.3e-12998.28Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
        MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDT+GLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGH MNDPPIL
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL

Query:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY
        G+GGVVSGANVNDRSTSFGGGRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY
Subjt:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY

Query:  KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
        KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Subjt:  KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR

XP_008455996.1 PREDICTED: RNA-binding protein 2-like isoform X2 [Cucumis melo]6.0e-131100Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
        MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL

Query:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY
        GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY
Subjt:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY

Query:  KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
        KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Subjt:  KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR

XP_022923072.1 RNA-binding protein 2-like isoform X2 [Cucurbita moschata]3.3e-12191.85Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMND-PPI
        MSDAYWRY+DSQQQPPSSVP V GKRPRVDYDT+G H+LP+YYPRQDDRP+LQGIKSVDSINESYERYLR+S+ISSYGGQSARPVGGGVPGH +ND PPI
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMND-PPI

Query:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
        +GIGGVVSGANVNDRS SFGGGRPN+PLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESR+ GRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
        YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Subjt:  YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR

XP_023553422.1 RNA-binding protein 2-like isoform X2 [Cucurbita pepo subsp. pepo]1.9e-12191.85Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMND-PPI
        MSDAYWRY+DSQQQPPSSVP V GKRPRVDYDT+G H+LPNYYPRQDDRP+LQGIKSVDSINESYERYLR+++ISSYGGQSARPVGGGVPGH +ND PPI
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMND-PPI

Query:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
        +GIGGVVSGANVNDRS SFGGGRPN+PLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESR+ GRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
        YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Subjt:  YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR

XP_038897625.1 RNA-binding protein 2-like isoform X1 [Benincasa hispida]9.8e-12696.55Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
        MSDAYWRYTDSQQQPPSSVP VVGKRPRVDYD TGLHELPNYY RQDDRPVLQGIKSVDSINESYERYLR+SQISSYGGQSARPVGGGVPGH +NDPPIL
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL

Query:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY
        GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR+ GRDPVVLGFVDFVSPAHAATAMDALQGY
Subjt:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY

Query:  KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
        KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Subjt:  KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR

TrEMBL top hitse value%identityAlignment
A0A0A0L796 RRM domain-containing protein2.1e-12998.28Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
        MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDT+GLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGH MNDPPIL
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL

Query:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY
        G+GGVVSGANVNDRSTSFGGGRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY
Subjt:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY

Query:  KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
        KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Subjt:  KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR

A0A1S3C3F7 RNA-binding protein 2-like isoform X22.9e-131100Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
        MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL

Query:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY
        GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY
Subjt:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGY

Query:  KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
        KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Subjt:  KFDEFDRDSVNLRLQFARFPGARSGGGHRGKR

A0A6J1CHS7 RNA-binding protein 2-like isoform X11.3e-11590.13Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSY-GGQSARPVGGGVPGHLMNDPPI
        MSDAYWRYTDSQQQPPS+   VVGKRPRVD+D+TG HELP+YYPRQDDR ++QGIKSVDSINESYERYLR+SQISSY GGQSARPV GGVPGH +NDPPI
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSY-GGQSARPVGGGVPGHLMNDPPI

Query:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
        +GIGGVVSGANVNDRS SFG GRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR+ GRD VVLGFVDFVSPAHAATAMDALQG
Subjt:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
        YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Subjt:  YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR

A0A6J1E554 RNA-binding protein 2-like isoform X21.6e-12191.85Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMND-PPI
        MSDAYWRY+DSQQQPPSSVP V GKRPRVDYDT+G H+LP+YYPRQDDRP+LQGIKSVDSINESYERYLR+S+ISSYGGQSARPVGGGVPGH +ND PPI
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMND-PPI

Query:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
        +GIGGVVSGANVNDRS SFGGGRPN+PLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESR+ GRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
        YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Subjt:  YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR

A0A6J1J2D2 RNA-binding protein 2-like isoform X13.0e-12091.42Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMND-PPI
        MSDAYWRY+DSQQQPPSSVP V GKRPRVDYDT+G H+LPNYYPRQDDRP+LQGIKSVDSINESYERYLR+S+ISSYG QSARPVGGGVPGH +ND PPI
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMND-PPI

Query:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
        +GIGGVVSGANVNDRS SFGGGRPN+PLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESR+ GRD VVLGFVDFVSPAHAATAMDALQG
Subjt:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
        YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Subjt:  YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A1.1e-4246.5Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYD----TTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMN-
        M+D YW     Q  PP    P+  KRPR D++    T  +     YYPR +D  V        +I  +Y+RYL++ Q    G  S    GGG  G   N 
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYD----TTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMN-

Query:  ---DPPILGIGGVVS-GANVNDRSTSFGGGRP--NIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAH
           D  +L  GGV+      N  +  F    P     LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K+S+    DP+VL FVDF +PA 
Subjt:  ---DPPILGIGGVVS-GANVNDRSTSFGGGRP--NIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAH

Query:  AATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
        AATA+ ALQGY+ DE + DS  LRLQF+R PG+R   G RG+R
Subjt:  AATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR

F4HWF9 Nuclear speckle RNA-binding protein B1.4e-3745.28Show/hide
Query:  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG----------GVPGHLMNDPPILGIGG-VVSGANVNDRSTSFG-------
        ++ +Y  + +DR +   +K   SI  +Y+RYL++ Q      + A P  G           +PG  M +  + G GG + S    N R   FG       
Subjt:  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG----------GVPGHLMNDPPILGIGG-VVSGANVNDRSTSFG-------

Query:  GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARF
         GR   PLPPD SNTL+VEGLPS+C+RREV+HIFRPFVGY+EVRLV ++S+    DP VL FVDF + A AATA+ ALQ Y+ DE + DS  LRLQF R 
Subjt:  GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARF

Query:  PGARSG--GGHR
        PG R G  GG R
Subjt:  PGARSG--GGHR

G7ID19 RNA-binding protein 22.7e-4945.56Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDT-----TGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVG--------G
        M+D +W        PP  +     KRPR +YDT     T  +E+ NY  + +   +L   K + S   +Y+R+L+++ ++S+    A  +G        G
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDT-----TGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVG--------G

Query:  GVPGHLMNDPPILG-IGGVVSGANV--NDRSTSFGG----------GRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGR
         +PGH + DP  +G + GV  G ++  N R  +FGG          G   IPLP DAS+TL+VEGLPS  T+REVAHIFRPFVGY+EVRLV KES+  G 
Subjt:  GVPGHLMNDPPILG-IGGVVSGANV--NDRSTSFGG----------GRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGR

Query:  DPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGG-GHRGKR
        DP++L FVDF +PA AATA+ ALQGYK DE + +S  LRLQF+R PG RSGG G RGKR
Subjt:  DPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGG-GHRGKR

Q6JB11 Protein MATERNALLY EXPRESSED GENE 51.5e-2869.41Show/hide
Query:  GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDE
        GGRP  PLPPDAS+TL++EGLP++CTRREV+HIFRPFVG++EVRLVNKESR  G DP VL FVDF +PA A  A++ALQG+  D+
Subjt:  GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDE

Q8H0P8 RNA-binding protein 16.1e-4646.48Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVG--KRPRVDYD--TTGL---HELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVG-------
        M+D YW    ++QQ   S+ P  G  KRPR DY+   +GL   +E+ +Y  R++DR     +K   +I  +Y+RYL+  Q+ S+    A  VG       
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVG--KRPRVDYD--TTGL---HELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVG-------

Query:  -GGVPGHLMNDPPIL--GIGGVVSGANVNDRSTSFGGGRPNIP----------LPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAG
         GG+P H ++DP  +    GG       N R  ++G   P  P          LPPDAS TL++EGLPS CTRREVAHIFRPFVGY+EVRLV+KE++  G
Subjt:  -GGVPGHLMNDPPIL--GIGGVVSGANVNDRSTSFGGGRPNIP----------LPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAG

Query:  RDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHR
         DP++L FVDF +PA AATA+ ALQGYK DE + +S +LRLQF+R+PG RSGGG R
Subjt:  RDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHR

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding9.7e-3945.28Show/hide
Query:  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG----------GVPGHLMNDPPILGIGG-VVSGANVNDRSTSFG-------
        ++ +Y  + +DR +   +K   SI  +Y+RYL++ Q      + A P  G           +PG  M +  + G GG + S    N R   FG       
Subjt:  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG----------GVPGHLMNDPPILGIGG-VVSGANVNDRSTSFG-------

Query:  GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARF
         GR   PLPPD SNTL+VEGLPS+C+RREV+HIFRPFVGY+EVRLV ++S+    DP VL FVDF + A AATA+ ALQ Y+ DE + DS  LRLQF R 
Subjt:  GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARF

Query:  PGARSG--GGHR
        PG R G  GG R
Subjt:  PGARSG--GGHR

AT1G21320.2 nucleotide binding;nucleic acid binding7.7e-4444.09Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVV-GKRPRVDYDTTGL----HELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG--------
        M+D YW      Q P SS P V+  KRPR D+  T       ++ +Y  + +DR +   +K   SI  +Y+RYL++ Q      + A P  G        
Subjt:  MSDAYWRYTDSQQQPPSSVPPVV-GKRPRVDYDTTGL----HELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG--------

Query:  --GVPGHLMNDPPILGIGG-VVSGANVNDRSTSFG-------GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPV
           +PG  M +  + G GG + S    N R   FG        GR   PLPPD SNTL+VEGLPS+C+RREV+HIFRPFVGY+EVRLV ++S+    DP 
Subjt:  --GVPGHLMNDPPILGIGG-VVSGANVNDRSTSFG-------GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPV

Query:  VLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSG--GGHR
        VL FVDF + A AATA+ ALQ Y+ DE + DS  LRLQF R PG R G  GG R
Subjt:  VLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSG--GGHR

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.7e-4446.5Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYD----TTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMN-
        M+D YW     Q  PP    P+  KRPR D++    T  +     YYPR +D  V        +I  +Y+RYL++ Q    G  S    GGG  G   N 
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYD----TTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMN-

Query:  ---DPPILGIGGVVS-GANVNDRSTSFGGGRP--NIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAH
           D  +L  GGV+      N  +  F    P     LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K+S+    DP+VL FVDF +PA 
Subjt:  ---DPPILGIGGVVS-GANVNDRSTSFGGGRP--NIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAH

Query:  AATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
        AATA+ ALQGY+ DE + DS  LRLQF+R PG+R   G RG+R
Subjt:  AATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-3453.33Show/hide
Query:  GGQSARP------VGGGVPGHLMN-DPPILGIGGVVS-GANVNDRSTSFGGGRP--NIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNK
        GG   RP       GGG  G++   D  +L  GGV+      N  +  F    P     LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K
Subjt:  GGQSARP------VGGGVPGHLMN-DPPILGIGGVVS-GANVNDRSTSFGGGRP--NIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNK

Query:  ESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
        +S+    DP+VL FVDF +PA AATA+ ALQGY+ DE + DS  LRLQF+R PG+R   G RG+R
Subjt:  ESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR

AT2G47580.1 spliceosomal protein U1A5.8e-0732.18Show/hide
Query:  GGGRPNIP-LPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDE
        GG +PN+P  P   +N LFV+ LP   T   +  +F  + G+KEVR++  +          + FV+F     +  AM  LQG+K  +
Subjt:  GGGRPNIP-LPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGACGCTTACTGGAGATATACCGACTCACAGCAGCAGCCTCCGTCGTCGGTTCCGCCCGTCGTCGGCAAGCGCCCTCGCGTCGATTACGATACCACTGGTCTTCA
CGAGCTGCCCAACTACTATCCACGTCAAGATGATAGGCCAGTTCTCCAAGGAATTAAAAGTGTTGATTCCATCAATGAGTCCTATGAACGTTACCTACGCACCTCGCAAA
TTTCATCTTATGGTGGACAGTCTGCTAGACCTGTTGGTGGGGGCGTTCCTGGTCATCTGATGAATGACCCACCTATCTTGGGCATTGGGGGTGTGGTTTCAGGGGCAAAT
GTTAATGACAGAAGTACGAGCTTTGGAGGTGGGAGGCCTAACATACCCCTTCCACCTGATGCTTCTAATACACTATTTGTGGAAGGCTTGCCTTCCAGCTGTACCAGGCG
TGAAGTAGCTCACATATTTCGCCCTTTTGTTGGCTACAAAGAAGTAAGACTTGTTAACAAGGAATCCAGAAGTGCTGGAAGAGATCCAGTGGTGCTTGGTTTTGTAGATT
TTGTGAGTCCTGCCCATGCAGCCACGGCCATGGATGCCTTACAAGGTTATAAATTCGATGAATTTGACCGTGACTCGGTCAATTTAAGGTTGCAATTTGCTCGCTTTCCT
GGTGCAAGGTCAGGTGGCGGGCATCGTGGAAAGCGTTGA
mRNA sequenceShow/hide mRNA sequence
GATCCCGATTGAAATGAGATTAAAACAATGGCGTAATGGAAAAGAAAAACTATTTCTAACCATTATTCAACAAGATTTATTATTCATAACTTACACACCCAAATTGTTCA
ATTTGATATACAAAATTATAAGAGAGAGGAGGCGGCAGTGTTGGATTATGTTGTGATGTGTGTTGTGTTGTTATGAACTTTGCAAGAAATCGTGAGAGAAAAGAAAAATA
TATATTATAGATATCATAGATCGTCCCCTTCAACTTGTAATCAAAATTCACCCAGCCGAGCTCACCTACATTCAACATTGTAGCCAGTCGCTGTTTCATCCTAAAATTCA
TCGCCTTTTTTGTAGGAGCATGTCGGACGCTTACTGGAGATATACCGACTCACAGCAGCAGCCTCCGTCGTCGGTTCCGCCCGTCGTCGGCAAGCGCCCTCGCGTCGATT
ACGATACCACTGGTCTTCACGAGCTGCCCAACTACTATCCACGTCAAGATGATAGGCCAGTTCTCCAAGGAATTAAAAGTGTTGATTCCATCAATGAGTCCTATGAACGT
TACCTACGCACCTCGCAAATTTCATCTTATGGTGGACAGTCTGCTAGACCTGTTGGTGGGGGCGTTCCTGGTCATCTGATGAATGACCCACCTATCTTGGGCATTGGGGG
TGTGGTTTCAGGGGCAAATGTTAATGACAGAAGTACGAGCTTTGGAGGTGGGAGGCCTAACATACCCCTTCCACCTGATGCTTCTAATACACTATTTGTGGAAGGCTTGC
CTTCCAGCTGTACCAGGCGTGAAGTAGCTCACATATTTCGCCCTTTTGTTGGCTACAAAGAAGTAAGACTTGTTAACAAGGAATCCAGAAGTGCTGGAAGAGATCCAGTG
GTGCTTGGTTTTGTAGATTTTGTGAGTCCTGCCCATGCAGCCACGGCCATGGATGCCTTACAAGGTTATAAATTCGATGAATTTGACCGTGACTCGGTCAATTTAAGGTT
GCAATTTGCTCGCTTTCCTGGTGCAAGGTCAGGTGGCGGGCATCGTGGAAAGCGTTGAATTATGCGATTTCACAGGATTTGCGCATACGGTGAAGTAATGAATTTGAGGC
AATGTGACAGTCGGATATCAAAAACTGGAGCGTATTAGTTAGGGCCGACCAAATTCGTAAACACTAATTTGTGATGAAATATGGTGATTTGGAGCGTTCTTTTATGTTTA
CAACCTCACTGTTTTTATACGTCTTGCTATGAACGTGTTGTTGAGCTGTGCTGTGGGATAAAATTTTCATTTGCTCATTATTTTCGGCTAGCGAGAATTTTGATCCGACA
ATATCCAGACGTGAGTTTAGTGATGAAAGAAAGTCGTATTATAAGATTAATACTCATTGTTGTGTTTACTTCAATTTTAAATTTATAACTATGTTCCAAAGCTGTGCATG
TTTTATTTGAGAAGAGTTTTGTTATCTGCGATGTGATCAGCTGGAGAAAAACCGAATTCTTCCTATATCTACATGGTATGAAAACTTATTAGAAACCTCTTGTTCCTGGG
TCTACCAAATCCTGTAAATTGGAGAATTCGTATTTGAGATGTTTCATGGTTCCTTGCAGCTTGGATCATTATTATTCGTTGTTTTTTGACCTCCGAATGCTTCAGGATTG
ATGACACTTTTCTGTCTCATATTTGAAGTGTTCTTTTCTCTTCGTTCATACGAGATTCGATATATGCAGTTCCTATATTGTGGAGTTGGATGAAGAATGCTAACAGATAA
CGAATATTATCTGACTTTTCTCCTTTGGGTTTCTTTATATGATTATGAGTCTTCTAGCAAGCATCAAATTTGCATATTGTTTTGATTCTTGTGCTCCTTTGTACTTGTGA
ATGATTCAAATGATTAAGGGTTTCAACAACCAAACTGCTCTTTTTTCTTCAGTCTATTACCTTAGTTGGTGGGTTAGGCCTTTTCTTTTCTCTCTTGGCTATGGAATAAG
GTATGTGGGAAGTTGAATAGCAACATGATCCTGGTGGTGCAGAAATGGACGACTTAGTCGAGAGCAAAATGGTGTACTCTGAGATTTAGAAGAAACCATCATTTTGAGTC
TGAGGCATCTGCAATTTCTTGAGGGCAAGGGATGGAATCTTTATGGATGAAGTGCACCATAGGCTTTTATGATGTAAGATGGGAACTACAACATTTTCCAGTTCTGTTCA
TGATTCCACATCTTTTTATGACTGAGTTTGGAGAGAGTGGAGGTATTTTAGGTGCGGCGTATTTCCTTTGGCTATGTAATCGTGTGGTTTTTGGAAAATGCAGACCTGAT
TTCCTCCGTAAATTCTCCAATTCAAATGGCAGAAAAGCTTCCATGTTTATACCTTTTCTTGCTGGAGGGGCGACTGCCCATTGAACTACCATGAAAAAAGGGGTGGGGAA
AAGAATTTGAAATAGAAAGGTTATGAAATAGCGAGACCTGTCCAGTGGAATTCATAGATTTGTTGCTTGGCTTTGCCCCTTTTCTCCAGGTTCATGCCCCTCTTCCTACG
GCTCCTACTACGACACATGGTCCTCTATTGATTTAGGTGTGCTATTGTATAGCATACCCCCAATTGTAGTAGCATATGGCTAGAGATGTCCACGAGGTTTGGAATGGTTC
TCTATCTTCATCCTTATCTCCATTCTTCTTTTTTTTTTTTTTTTTATGCGTCCTCAATTTTCATTTACTTTCATGGTATCATGGTTTTTTCTCTTGAACAGTTATATTAA
ATAACTAATATTTAAAATTTTTAATTGAACAGTTAAATTTCCTACGGCCTATCCTATAGATAATTTGAATGTAGAGAGATTGTTAGAGAGATTGTTCCATTCAATCTTTG
TCAGTATAAAGAGAATGGTTAACTGCCCATTGGTTTCTATGTATTTATCTAAATTTAAACACTCAATTCAAACATATCCTTTTAATTTAAACTTGGTCTCTAACAAAATT
TGTAATTTATGTCTAACATTACTATAACATAACAGTAACTGTTATAGCTTTTTAGAAGGCTCAAAAGTTTTTGGGCTTTCTTCGTTAATTAGAAGTTGGAAGGAAATAGG
TTCTAACATGCTCACAAATAAGGTTAATCCACTTTCCACGAAACGTCAACCTATCCATCGT
Protein sequenceShow/hide protein sequence
MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPILGIGGVVSGAN
VNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFP
GARSGGGHRGKR