; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0161971 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0161971
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr06:10594150..10594862
RNA-Seq ExpressionCmc06g0161971
SyntenyCmc06g0161971
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.2e-102100Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR

KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.2e-102100Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR

KAA0057254.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.4e-10198.94Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        MIITGNDP AISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTD+RSTTGYCFYLGDSLISWR
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR

TYK04714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.2e-102100Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR

TYK21532.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.9e-10199.47Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        MIITGNDP AISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR

TrEMBL top hitse value%identityAlignment
A0A5A7T8F2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-102100Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR

A0A5A7UPX9 Retrovirus-related Pol polyprotein from transposon TNT 1-942.6e-10198.94Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        MIITGNDP AISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTD+RSTTGYCFYLGDSLISWR
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR

A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-102100Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR

A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-102100Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR

A0A5D3DD70 Retrovirus-related Pol polyprotein from transposon TNT 1-949.0e-10299.47Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        MIITGNDP AISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
        YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.1e-2332Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        ++I   D   +++ + YL + F M DL  + +F+G+ +  + D   LSQ+ Y   +L++  + + N  STPL   ++    +     N    R L+G L+
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSL--VLSGYSDADWAGDPTDRRSTTGYCFYLGD-SLISWRRSHSPSL
        Y+ + TRPD+  AV+I+S++ +   +  +  + R+LRY+KGT+   L F    +    + GY D+DWAG   DR+STTGY F + D +LI W      S+
Subjt:  YLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSL--VLSGYSDADWAGDPTDRRSTTGYCFYLGD-SLISWRRSHSPSL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-2640.91Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEV--SRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLT----PYDGVPLENVSL--Y
        M+I G D   I+ L+  L + F+MKDLG     LG+++   R S    LSQ KY   +L R  + ++   STPL  ++ L+    P       N++   Y
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEV--SRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLT----PYDGVPLENVSL--Y

Query:  RQLVGSLIYLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
           VGSL+Y  V TRPDIA+AV +VS+F+  P   H+ AV  ILRY++GT G  L F   S  +L GY+DAD AGD  +R+S+TGY F      ISW+
Subjt:  RQLVGSLIYLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR

P92519 Uncharacterized mitochondrial protein AtMg008102.0e-3741.33Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        +++TG+    ++ L   L   F MKDLG ++YFLG+++     G  LSQ KYA  +L  +G+ D    STPL   ++ +        + S +R +VG+L 
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRRSHSPSL
        YLT+TRPDI+YAV+IV Q M  P    F  + R+LRYVKGT+ HGL     S L +  + D+DWAG  + RRSTTG+C +LG ++ISW     P++
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRRSHSPSL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.5e-4047.34Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        ++ITGNDP  + +    L Q F +KD   L+YFLG+E  R   G  LSQ +Y  DLLAR+ +  +   +TP+ P+  L+ Y G  L + + YR +VGSL 
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISW
        YL  TRPDI+YAV+ +SQFM  P   H  A+ RILRY+ GT  HG+     ++L L  YSDADWAGD  D  ST GY  YLG   ISW
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISW

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.5e-3744.15Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        ++ITGND   +      L Q F +K+   L+YFLG+E  R   G  LSQ +Y  DLLAR+ +  +   +TP+  +  LT + G  L + + YR +VGSL 
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISW
        YL  TRPD++YAV+ +SQ+M  P   H+ A+ R+LRY+ GT  HG+     ++L L  YSDADWAGD  D  ST GY  YLG   ISW
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISW

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.2e-4344.97Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        +II  N+  A+ +L+  L   F+++DLG L YFLGLE++R + G  + Q KYA DLL  +G+     +S P+DP+V  + + G    +   YR+L+G L+
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR
        YL +TR DI++AV+ +SQF  APR  H  AV++IL Y+KGT+G GL +SSQ+ + L  +SDA +      RRST GYC +LG SLISW+
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWR

ATMG00240.1 Gag-Pol-related retrotransposon family protein2.8e-1851.9Show/hide
Query:  IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYC
        +YLT+TRPD+ +AV+ +SQF +A RT    AV ++L YVKGT+G GL +S+ S L L  ++D+DWA  P  RRS TG+C
Subjt:  IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein1.4e-3841.33Show/hide
Query:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI
        +++TG+    ++ L   L   F MKDLG ++YFLG+++     G  LSQ KYA  +L  +G+ D    STPL   ++ +        + S +R +VG+L 
Subjt:  MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLI

Query:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRRSHSPSL
        YLT+TRPDI+YAV+IV Q M  P    F  + R+LRYVKGT+ HGL     S L +  + D+DWAG  + RRSTTG+C +LG ++ISW     P++
Subjt:  YLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRRSHSPSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTATCACTGGTAATGATCCACATGCCATATCCGATCTCCAACACTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGGTCTCTCAACTACTTTCTTGGTCTTGA
AGTCTCTCGGCGCTCGGACGGGTATCTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCCCGCTCAGGAATTACTGACTCTAACACAGCTTCAACGCCGTTAGATC
CCAACGTTCATTTAACCCCTTATGATGGTGTTCCTCTTGAAAATGTCAGCCTGTATCGACAACTCGTTGGCAGCCTCATCTATCTAACAGTGACTCGCCCAGACATTGCA
TATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCACTTTACTGCCGTACTTCGTATCCTTCGCTATGTCAAGGGAACCTTGGGACATGGACTTCA
GTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCCGATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACAACCGGTTACTGCTTCTACTTAGGTGATT
CTCTCATTTCGTGGCGTAGGTCCCACTCTCCTTCATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTATCACTGGTAATGATCCACATGCCATATCCGATCTCCAACACTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGGTCTCTCAACTACTTTCTTGGTCTTGA
AGTCTCTCGGCGCTCGGACGGGTATCTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCCCGCTCAGGAATTACTGACTCTAACACAGCTTCAACGCCGTTAGATC
CCAACGTTCATTTAACCCCTTATGATGGTGTTCCTCTTGAAAATGTCAGCCTGTATCGACAACTCGTTGGCAGCCTCATCTATCTAACAGTGACTCGCCCAGACATTGCA
TATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCACTTTACTGCCGTACTTCGTATCCTTCGCTATGTCAAGGGAACCTTGGGACATGGACTTCA
GTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCCGATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACAACCGGTTACTGCTTCTACTTAGGTGATT
CTCTCATTTCGTGGCGTAGGTCCCACTCTCCTTCATTGTGA
Protein sequenceShow/hide protein sequence
MIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIA
YAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRRSHSPSL