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Cmc06g0162231 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0162231
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationCMiso1.1chr06:10964299..10966775
RNA-Seq ExpressionCmc06g0162231
SyntenyCmc06g0162231
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025799.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.3e-1381.82Show/hide
Query:  QFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRR
        QF IQQDVPRGCN +PLLHDI+LRTADWLD+VAHLVMRW+N +R
Subjt:  QFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRR
KAA0050311.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.7e-1374Show/hide
Query:  LQPDQFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
        + P++F IQQ VPR CNT+ LLH+IDLRTADWLDRVAHLVMRW NRRR +
Subjt:  LQPDQFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
KAA0051098.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.2e-1586.96Show/hide
Query:  QFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
        QF IQQDVP GCNT+PLLHDIDLRTADW DRVAHLVMRWLNRRR +
Subjt:  QFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
KAA0051227.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.9e-1482.61Show/hide
Query:  QFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
        QF IQQ VP GCNTKPLLHDIDLRT DW DRVAHL+MRWLNRRR +
Subjt:  QFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.6e-1781.48Show/hide
Query:  MFDLLQPDQFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
        MFDLLQP QF IQQ VPR CNT+PLLH+IDLRTADW DRVAHLVMRW NRRR +
Subjt:  MFDLLQPDQFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
TrEMBL top hitse value%identityAlignment
A0A5A7SKN5 Serine/threonine-protein phosphatase 7 long form-like protein1.1e-1381.82Show/hide
Query:  QFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRR
        QF IQQDVPRGCN +PLLHDI+LRTADWLD+VAHLVMRW+N +R
Subjt:  QFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRR
A0A5A7U731 Serine/threonine-protein phosphatase 7 long form-like protein2.0e-1586.96Show/hide
Query:  QFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
        QF IQQDVP GCNT+PLLHDIDLRTADW DRVAHLVMRWLNRRR +
Subjt:  QFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
A0A5A7U9V2 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.2e-1374Show/hide
Query:  LQPDQFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
        + P++F IQQ VPR CNT+ LLH+IDLRTADWLDRVAHLVMRW NRRR +
Subjt:  LQPDQFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
A0A5A7U9Y2 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.8e-1482.61Show/hide
Query:  QFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
        QF IQQ VP GCNTKPLLHDIDLRT DW DRVAHL+MRWLNRRR +
Subjt:  QFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
A0A5D3CT32 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.7e-1781.48Show/hide
Query:  MFDLLQPDQFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
        MFDLLQP QF IQQ VPR CNT+PLLH+IDLRTADW DRVAHLVMRW NRRR +
Subjt:  MFDLLQPDQFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGATCTTCTTCAACCTGATCAATTTGATATTCAACAAGATGTTCCACGTGGTTGTAATACTAAACCACTGTTGCACGACATTGACCTGAGGACTGCTGAT
TGGTTAGATAGAGTTGCTCATTTAGTGATGCGATGGCTAAATCGCAGAAGGTTAAGCTACAGGACCTCCAATTGGGCAATTTGA
mRNA sequenceShow/hide mRNA sequence
TGGCCATGCCATTTTGCCATTGTTCTGTCAGCCACACACTTATTAACTTTCAACAAAACTTACACTTATCTTTGTAGACCGATGAAAATATATAGATGGTAGGCT
TTTCAACTGAAAATAAGTTTCAGCCCATTCCTCCTCCATTGATGGCGAGCTTGGGAGGCTTCTTTTAAATCTTCTTCCTTCATACTACGACAACACCCAAAAAAA
CATCTTCCTTTTAAATTTCTTCCTTTAGTTTCTCTTCCTTTTAAGCCTTCTTCCTTCACCGACTTCTTCCTTCACGGTCAGAGTCATGGTGATTGGTTGTATCTT
TGCCAAGTATTACTCGGTGTGAGCCCACTTGCTGAACAAATCAGGGGTTTGAGGTTGAGTTTAACATGGCTGGGGGTAGAGTTTTCTGGATTGGCTGACGATGCC
GATGAGCAAACTATCACAAGATATGCACGAGCATATATTTTACAGTTGATGGGTGAGAGTATATTCGCAGATAAATCAACTTGTTATGTGCACCTAATATTCTTA
CCATTCTTATCTAATATGCACCACACGTCGCAATATTCGTGGAGTGGAGCCTGTTTAGCATGGTTGTATAGATAATTATGCAAGACATCCAAACAAGGTATTCGT
GAAATTGTTGGACCACTAATATTGTTACAATTATGGGCTTGGAAACGATTCCCAATAGTTGCTCCACAACTCCTGCATGTTAATGCTCATCAATTACACGGTCGA
GCTTATGGTTCAAGATGAAGAGATCAATTTTGTGTGACCAAGTTGGCTACACATGTAGTCTCTAAGTATAGATACATGTTTGATCTTCTTCAACCTGATCAATTT
GATATTCAACAAGATGTTCCACGTGGTTGTAATACTAAACCACTGTTGCACGACATTGACCTGAGGACTGCTGATTGGTTAGATAGAGTTGCTCATTTAGTGATG
CGATGGCTAAATCGCAGAAGGTTAAGCTACAGGACCTCCAATTGGGCAATTTGATACGGATGTAACTCAAGAATACATCCATTGGTATAAAAACATTACCAGGCT
CTATATCACCCAACCGAGAGCTGCTGTAGAGATTAAACAAAAGTAGACTTCGAGTTGTTGCAGATGATCCAAGGTCCTAAATATATGCAATGATAACGAGCAGTA
CATCGATAGCATACACTATATGTATGATGTACCTATTGTACCTGCTCCAGTTCAAAGGAGACGTACTCTAGTGCAAAAGCTTGATGAATTGGAAGAAGTTGACCA
AAACGTGGAAGAAGTGCCTCCTATCACACAAACACAGAGCGAGACTGGTTACGTTAGTCCAATGATGATGATGTCGGCGTTTGGAACGAGATATTATTATCCAGG
AGTTGGTCAATCGTCAGGCTTCGGAACATGATATTACAATTTAGAGGCAAGTCCATCATCATCAAACTTTGGACAAGAATACTATGATTTAGGGACCAATCCATC
ATCTTCATACATGCATGGTCATGGATGCAGTCGTGGAGAACATAACGAATATTTATACTACGAAGCGCCCGCAGTGGTACCCGATGAACCAAATGAGCAACAACA
ACAAGAGAATCAGAAGGAACTACAACAACAAAGAGTGCAGAGTCGACGACGACAACCAACTAGAAATCGTCGACGTCCAAGTTGTGGAACACATTGATTTTTTTC
ATTAAATGAAAATTGTTAAATTATCGTATTAGACATTCTACTTTATATTTAATTATTATTCAATCACAAGCAATTACTAAAAATTTAC
Protein sequenceShow/hide protein sequence
MFDLLQPDQFDIQQDVPRGCNTKPLLHDIDLRTADWLDRVAHLVMRWLNRRRLSYRTSNWAI