| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-172 | 93.79 | Show/hide |
Query: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDR GRLVKNGLLN+LKD SLPPCESCLEGKMTKR T K YRAKEPLELIHSDLCGPMNVK RGGFEY
Subjt: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
FISFIDDYSRYGYLYLMEHKSEALEKFKEYK EVENLLSKKIKILRSDRG EYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSE+RNRTLLDMVRS MSY
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
Query: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
AQLPSSFWGYAVETAVHILNNV SKSVSETPF LWRG KPSLSHF IWGCPAHVLVTNPKKLE RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
Subjt: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
Query: EEDHMRDHKPRSKLILNEATDE
EEDHMR+HKPRSKL+L+EATDE
Subjt: EEDHMRDHKPRSKLILNEATDE
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 2.6e-169 | 92.24 | Show/hide |
Query: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDR GRLVK+GLLN+LKD SLPPCESCLEGKMTKR T K YRAKEPLELIHSDLCGPMNVK RG FEY
Subjt: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
FISFIDDYSRYGYLYLMEHKSEALEKFKEYK EVENLLSKKIKI RSDRG EYMDL FQDYMIEHGIQSQLSAPGTPQQNGVSE+RNRTLLDMVRS MSY
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
Query: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
AQLPSSFWGYAVETAVHILNNV SKSVSETPF LWRG KPSLSHF IWGCPAHVLVTNPKKLE RSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFL
Subjt: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
Query: EEDHMRDHKPRSKLILNEATDE
EEDHMR+HKPRSKL+L+EATDE
Subjt: EEDHMRDHKPRSKLILNEATDE
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| KAA0060534.1 gag/pol protein [Cucumis melo var. makuwa] | 6.0e-166 | 90.37 | Show/hide |
Query: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
MFRTANTQNKRQRIS NNNTYLWHLRLGHINLDR GRLVKNGLLN+L+DDSLPPCESCLEGKMTKR T K YRAKEPLELIHSDLCGPMNVK GGFEY
Subjt: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
FISFIDDYS YGYLYL+EHKSEALEKFKEYK EVENLLSKKIKILRSDRG EYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSE+RNRTLLDMV S MSY
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
Query: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
QLPSSFWGYAVETAVHILNNV SK+V ETPF LWRG KPSLSHF IW CP HVLVTNPKKLE RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATF
Subjt: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
Query: EEDHMRDHKPRSKLILNEATDE
EEDHMRDHKPR KL+L+EATDE
Subjt: EEDHMRDHKPRSKLILNEATDE
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| KAA0065386.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-163 | 89.44 | Show/hide |
Query: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
MFRTANTQNKRQRISPNN TYLWHLRLGHINLD+ GRLVKNGLLN+L+DDSLPPCES LEGKMTKR K YRAKEPLELIHSDL GPMNVK R GFEY
Subjt: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
FISFIDDYSRYGYLYLMEHKSEALEK KEY+ EVENLLS+KIKILRSDRG EYMDLRFQDYMIEHGIQSQLSA GTPQQNGVSE+RNRTLLDMVRS MSY
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
Query: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
AQ PSSFWGYAVETAVHILNNV SKSVSE PF LWRG KPSLSHF IWGCP H+LVTNPKKLE RSRLCQFVGYPK+TRGGLFFDPQENRVFVSTNATFL
Subjt: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
Query: EEDHMRDHKPRSKLILNEATDE
EEDHMRDHKPRSKL+LNEAT+E
Subjt: EEDHMRDHKPRSKLILNEATDE
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| TYK13967.1 gag/pol protein [Cucumis melo var. makuwa] | 5.3e-170 | 99.66 | Show/hide |
Query: RLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDYSRYGYLYLMEHKSEALE
+LGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDYSRYGYLYLMEHKSEALE
Subjt: RLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDYSRYGYLYLMEHKSEALE
Query: KFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRSMSYAQLPSSFWGYAVETAVHILNNVSSKS
KFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRSMSYAQLPSSFWGYAVETAVHILNNVSSKS
Subjt: KFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRSMSYAQLPSSFWGYAVETAVHILNNVSSKS
Query: VSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLILNEATDE
VSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLILNEATDE
Subjt: VSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLILNEATDE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 1.3e-169 | 92.24 | Show/hide |
Query: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDR GRLVK+GLLN+LKD SLPPCESCLEGKMTKR T K YRAKEPLELIHSDLCGPMNVK RG FEY
Subjt: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
FISFIDDYSRYGYLYLMEHKSEALEKFKEYK EVENLLSKKIKI RSDRG EYMDL FQDYMIEHGIQSQLSAPGTPQQNGVSE+RNRTLLDMVRS MSY
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
Query: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
AQLPSSFWGYAVETAVHILNNV SKSVSETPF LWRG KPSLSHF IWGCPAHVLVTNPKKLE RSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFL
Subjt: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
Query: EEDHMRDHKPRSKLILNEATDE
EEDHMR+HKPRSKL+L+EATDE
Subjt: EEDHMRDHKPRSKLILNEATDE
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| A0A5A7TZD0 Gag/pol protein | 9.4e-173 | 93.79 | Show/hide |
Query: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDR GRLVKNGLLN+LKD SLPPCESCLEGKMTKR T K YRAKEPLELIHSDLCGPMNVK RGGFEY
Subjt: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
FISFIDDYSRYGYLYLMEHKSEALEKFKEYK EVENLLSKKIKILRSDRG EYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSE+RNRTLLDMVRS MSY
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
Query: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
AQLPSSFWGYAVETAVHILNNV SKSVSETPF LWRG KPSLSHF IWGCPAHVLVTNPKKLE RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
Subjt: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
Query: EEDHMRDHKPRSKLILNEATDE
EEDHMR+HKPRSKL+L+EATDE
Subjt: EEDHMRDHKPRSKLILNEATDE
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| A0A5A7VGC7 Gag/pol protein | 1.8e-163 | 89.44 | Show/hide |
Query: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
MFRTANTQNKRQRISPNN TYLWHLRLGHINLD+ GRLVKNGLLN+L+DDSLPPCES LEGKMTKR K YRAKEPLELIHSDL GPMNVK R GFEY
Subjt: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
FISFIDDYSRYGYLYLMEHKSEALEK KEY+ EVENLLS+KIKILRSDRG EYMDLRFQDYMIEHGIQSQLSA GTPQQNGVSE+RNRTLLDMVRS MSY
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
Query: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
AQ PSSFWGYAVETAVHILNNV SKSVSE PF LWRG KPSLSHF IWGCP H+LVTNPKKLE RSRLCQFVGYPK+TRGGLFFDPQENRVFVSTNATFL
Subjt: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
Query: EEDHMRDHKPRSKLILNEATDE
EEDHMRDHKPRSKL+LNEAT+E
Subjt: EEDHMRDHKPRSKLILNEATDE
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| A0A5D3BNE1 Gag/pol protein | 2.9e-166 | 90.37 | Show/hide |
Query: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
MFRTANTQNKRQRIS NNNTYLWHLRLGHINLDR GRLVKNGLLN+L+DDSLPPCESCLEGKMTKR T K YRAKEPLELIHSDLCGPMNVK GGFEY
Subjt: MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
FISFIDDYS YGYLYL+EHKSEALEKFKEYK EVENLLSKKIKILRSDRG EYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSE+RNRTLLDMV S MSY
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRS-MSY
Query: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
QLPSSFWGYAVETAVHILNNV SK+V ETPF LWRG KPSLSHF IW CP HVLVTNPKKLE RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATF
Subjt: AQLPSSFWGYAVETAVHILNNVSSKSVSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL
Query: EEDHMRDHKPRSKLILNEATDE
EEDHMRDHKPR KL+L+EATDE
Subjt: EEDHMRDHKPRSKLILNEATDE
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| A0A5D3CPW6 Gag/pol protein | 2.6e-170 | 99.66 | Show/hide |
Query: RLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDYSRYGYLYLMEHKSEALE
+LGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDYSRYGYLYLMEHKSEALE
Subjt: RLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDYSRYGYLYLMEHKSEALE
Query: KFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRSMSYAQLPSSFWGYAVETAVHILNNVSSKS
KFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRSMSYAQLPSSFWGYAVETAVHILNNVSSKS
Subjt: KFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRSMSYAQLPSSFWGYAVETAVHILNNVSSKS
Query: VSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLILNEATDE
VSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLILNEATDE
Subjt: VSETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLILNEATDE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.7e-42 | 34.55 | Show/hide |
Query: NNTYLWHLRLGHIN------LDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTK---RHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDY
NN LWH R GHI+ + R LLN L + S CE CL GK + + L +K + K PL ++HSD+CGP+ YF+ F+D +
Subjt: NNTYLWHLRLGHIN------LDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTK---RHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDY
Query: SRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRSM-SYAQLPSSFW
+ Y YL+++KS+ F+++ A+ E + K+ L D GREY+ + + ++ GI L+ P TPQ NGVSE+ RT+ + R+M S A+L SFW
Subjt: SRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRSM-SYAQLPSSFW
Query: GYAVETAVHILNNVSSKSV---SETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPK-KLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDH
G AV TA +++N + S+++ S+TP+ +W KP L H ++G +V + N + K + +S FVGY E G +D N F+ ++E +
Subjt: GYAVETAVHILNNVSSKSV---SETPFVLWRGSKPSLSHFIIWGCPAHVLVTNPK-KLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDH
Query: M
M
Subjt: M
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.5e-54 | 38.6 | Show/hide |
Query: LWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDYSRYGYLYLMEHKS
LWH R+GH++ L K L++ K ++ PC+ CL GK + R L+L++SD+CGPM ++ GG +YF++FIDD SR ++Y+++ K
Subjt: LWHLRLGHINLDRFGRLVKNGLLNELKDDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDYSRYGYLYLMEHKS
Query: EALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRSM-SYAQLPSSFWGYAVETAVHILNN
+ + F+++ A VE +K+K LRSD G EY F++Y HGI+ + + PGTPQ NGV+E+ NRT+++ VRSM A+LP SFWG AV+TA +++N
Subjt: EALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDMVRSM-SYAQLPSSFWGYAVETAVHILNN
Query: VSSKSVS-ETPFVLWRGSKPSLSHFIIWGCP--AHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEED
S ++ E P +W + S SH ++GC AHV KL+ +S C F+GY E G +DP + +V S + F E +
Subjt: VSSKSVS-ETPFVLWRGSKPSLSHFIIWGCP--AHVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEED
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| Q07791 Transposon Ty2-DR3 Gag-Pol polyprotein | 3.6e-20 | 29.79 | Show/hide |
Query: TANTQNKRQRISPNNNTY-LWHLRLGHINLDRFGRLVKNGLLNELKDDSLP-------PCESCLEGKMTK-RHLTEKRYR---AKEPLELIHSDLCGPMN
T N NK + S N Y L H LGH N + +K + LK+ + C CL GK TK RH+ R + + EP + +H+D+ GP++
Subjt: TANTQNKRQRISPNNNTY-LWHLRLGHINLDRFGRLVKNGLLNELKDDSLP-------PCESCLEGKMTK-RHLTEKRYR---AKEPLELIHSDLCGPMN
Query: VKVRGGFEYFISFIDDYSRYGYLYLMEHKSE--ALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRT
+ YFISF D+ +R+ ++Y + + E L F A ++N + ++ +++ DRG EY + + GI + + + +GV+E+ NRT
Subjt: VKVRGGFEYFISFIDDYSRYGYLYLMEHKSE--ALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRT
Query: LLDMVRSMSYAQ-LPSSFWGYAVETAVHILNNVSS
LL+ R++ + LP+ W AVE + I N++ S
Subjt: LLDMVRSMSYAQ-LPSSFWGYAVETAVHILNNVSS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.2e-33 | 29.68 | Show/hide |
Query: WHLRLGHINLDRFGRLVKNGLLNELK-DDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDYSRYGYLYLMEHKS
WH RLGH ++ N L+ L C CL K K ++ + PLE I+SD+ + + Y++ F+D ++RY +LY ++ KS
Subjt: WHLRLGHINLDRFGRLVKNGLLNELK-DDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDYSRYGYLYLMEHKS
Query: EALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDM-VRSMSYAQLPSSFWGYAVETAVHILNN
+ E F +K +EN +I SD G E++ L +Y +HGI S P TP+ NG+SE+++R +++ + +S+A +P ++W YA AV+++N
Subjt: EALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDM-VRSMSYAQLPSSFWGYAVETAVHILNN
Query: VSSKSVS-ETPFVLWRGSKPSLSHFIIWGCPAHVLVT--NPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLE
+ + + E+PF G+ P+ ++GC + + N KL+ +SR C F+GY L Q +R+++S + F E
Subjt: VSSKSVS-ETPFVLWRGSKPSLSHFIIWGCPAHVLVT--NPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.2e-34 | 30.74 | Show/hide |
Query: WHLRLGHINLDRFGRLVKNGLLNELK-DDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDYSRYGYLYLMEHKS
WH RLGH +L ++ N L L L C C K K + + +PLE I+SD+ + + + Y++ F+D ++RY +LY ++ KS
Subjt: WHLRLGHINLDRFGRLVKNGLLNELK-DDSLPPCESCLEGKMTKRHLTEKRYRAKEPLELIHSDLCGPMNVKVRGGFEYFISFIDDYSRYGYLYLMEHKS
Query: EALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDM-VRSMSYAQLPSSFWGYAVETAVHILNN
+ + F +K+ VEN +I L SD G E++ LR DY+ +HGI S P TP+ NG+SE+++R +++M + +S+A +P ++W YA AV+++N
Subjt: EALEKFKEYKAEVENLLSKKIKILRSDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSEKRNRTLLDM-VRSMSYAQLPSSFWGYAVETAVHILNN
Query: VSSKSVS-ETPFVLWRGSKPSLSHFIIWGCPAHVLVT--NPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLE
+ + + ++PF G P+ ++GC + + N KLE +S+ C F+GY L R++ S + F E
Subjt: VSSKSVS-ETPFVLWRGSKPSLSHFIIWGCPAHVLVT--NPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLE
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