; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0162471 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0162471
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr06:11355183..11356597
RNA-Seq ExpressionCmc06g0162471
SyntenyCmc06g0162471
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0006303 - double-strand break repair via nonhomologous end joining (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0043564 - Ku70:Ku80 complex (cellular component)
GO:0016020 - membrane (cellular component)
GO:0016787 - hydrolase activity (molecular function)
GO:0042162 - telomeric DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
GO:0003684 - damaged DNA binding (molecular function)
GO:0003678 - DNA helicase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025181.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.5e-22386.17Show/hide
Query:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD
        MKFKFF SSIEEEDDRQNEIVDD SVRGTRLLSDIYERCNV VCEPAN AEAKKDQRW+AAMEEELSMIEKNKTWILVDRPQDRKVI VKWVFRTKLNAD
Subjt:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD

Query:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR
        GSINKHKARLVVK YAQI GVDYSDTFAP                                           P+GCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLV  NNADHIQNFKWEMMKMFE TDLGLMSYFLGIEIKQGQGEVFICQ KYAK+ILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFM+CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG

Query:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE
        FSDSDWGGSIDDMRSTLGYCFTLSS VFSWS KKQEIVAQSTAE EFIA T TANQALWLRKILLDLDLE
Subjt:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE

KAA0035947.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.5e-22386.17Show/hide
Query:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD
        MKFKFF SSIEEEDDRQNEIVDD SVRGTRLLSDIYERCNV VCEPAN AEAKKDQRW+AAMEEELSMIEKNKTWILVDRPQDRKVI VKWVFRTKLNAD
Subjt:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD

Query:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR
        GSINKHKARLVVK YAQI GVDYSDTFAP                                           P+GCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLV  NNADHIQNFKWEMMKMFE TDLGLMSYFLGIEIKQGQGEVFICQ KYAK+ILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFM+CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG

Query:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE
        FSDSDWGGSIDDMRSTLGYCFTLSS VFSWS KKQEIVAQSTAE EFIA T TANQALWLRKILLDLDLE
Subjt:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE

TYJ95793.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.5e-22386.17Show/hide
Query:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD
        MKFKFF SSIEEEDDRQNEIVDD SVRGTRLLSDIYERCNV VCEPAN AEAKKDQRW+AAMEEELSMIEKNKTWILVDRPQDRKVI VKWVFRTKLNAD
Subjt:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD

Query:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR
        GSINKHKARLVVK YAQI GVDYSDTFAP                                           P+GCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLV  NNADHIQNFKWEMMKMFE TDLGLMSYFLGIEIKQGQGEVFICQ KYAK+ILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFM+CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG

Query:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE
        FSDSDWGGSIDDMRSTLGYCFTLSS VFSWS KKQEIVAQSTAE EFIA T TANQALWLRKILLDLDLE
Subjt:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE

TYK12368.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.0e-22486.38Show/hide
Query:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD
        MKFKFF SSIEEEDDRQNEIVDD SVRGTRLLSDIYERCNV VCEPAN AEAKKDQRW+AAMEEELSMIEKNKTWILVDRPQDRKVI VKWVFRTKLNAD
Subjt:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD

Query:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR
        GSINKHKARLVVK YAQI GVDYSDTFAP                                           P+GCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLV  NNADHIQNFKWEMMKMFE TDLGLMSYFLGIEIKQGQGEVFICQ KYAK+ILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFM+CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG

Query:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE
        FSDSDWGGSIDDMRSTLGYCFTLSS VFSWSLKKQEIVAQSTAE EFIA T TANQALWLRKILLDLDLE
Subjt:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE

TYK21117.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.5e-22386.17Show/hide
Query:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD
        MKFKFF SSIEEEDDRQNEIVDD SVRGTRLLSDIYERCNV VCEPAN AEAKKDQRW+AAMEEELSMIEKNKTWILVDRPQDRKVI VKWVFRTKLNAD
Subjt:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD

Query:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR
        GSINKHKARLVVK YAQI GVDYSDTFAP                                           P+GCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLV  NNADHIQNFKWEMMKMFE TDLGLMSYFLGIEIKQGQGEVFICQ KYAK+ILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFM+CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG

Query:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE
        FSDSDWGGSIDDMRSTLGYCFTLSS VFSWS KKQEIVAQSTAE EFIA T TANQALWLRKILLDLDLE
Subjt:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE

TrEMBL top hitse value%identityAlignment
A0A5D3BL45 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-22386.17Show/hide
Query:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD
        MKFKFF SSIEEEDDRQNEIVDD SVRGTRLLSDIYERCNV VCEPAN AEAKKDQRW+AAMEEELSMIEKNKTWILVDRPQDRKVI VKWVFRTKLNAD
Subjt:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD

Query:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR
        GSINKHKARLVVK YAQI GVDYSDTFAP                                           P+GCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLV  NNADHIQNFKWEMMKMFE TDLGLMSYFLGIEIKQGQGEVFICQ KYAK+ILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFM+CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG

Query:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE
        FSDSDWGGSIDDMRSTLGYCFTLSS VFSWS KKQEIVAQSTAE EFIA T TANQALWLRKILLDLDLE
Subjt:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE

A0A5D3CMK4 Retrovirus-related Pol polyprotein from transposon TNT 1-942.4e-22486.38Show/hide
Query:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD
        MKFKFF SSIEEEDDRQNEIVDD SVRGTRLLSDIYERCNV VCEPAN AEAKKDQRW+AAMEEELSMIEKNKTWILVDRPQDRKVI VKWVFRTKLNAD
Subjt:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD

Query:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR
        GSINKHKARLVVK YAQI GVDYSDTFAP                                           P+GCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLV  NNADHIQNFKWEMMKMFE TDLGLMSYFLGIEIKQGQGEVFICQ KYAK+ILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFM+CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG

Query:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE
        FSDSDWGGSIDDMRSTLGYCFTLSS VFSWSLKKQEIVAQSTAE EFIA T TANQALWLRKILLDLDLE
Subjt:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE

A0A5D3DBU0 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-22386.17Show/hide
Query:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD
        MKFKFF SSIEEEDDRQNEIVDD SVRGTRLLSDIYERCNV VCEPAN AEAKKDQRW+AAMEEELSMIEKNKTWILVDRPQDRKVI VKWVFRTKLNAD
Subjt:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD

Query:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR
        GSINKHKARLVVK YAQI GVDYSDTFAP                                           P+GCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLV  NNADHIQNFKWEMMKMFE TDLGLMSYFLGIEIKQGQGEVFICQ KYAK+ILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFM+CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG

Query:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE
        FSDSDWGGSIDDMRSTLGYCFTLSS VFSWS KKQEIVAQSTAE EFIA T TANQALWLRKILLDLDLE
Subjt:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE

A0A5D3DMJ1 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-22386.17Show/hide
Query:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD
        MKFKFF SSIEEEDDRQNEIVDD SVRGTRLLSDIYERCNV VCEPAN AEAKKDQRW+AAMEEELSMIEKNKTWILVDRPQDRKVI VKWVFRTKLNAD
Subjt:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD

Query:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR
        GSINKHKARLVVK YAQI GVDYSDTFAP                                           P+GCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLV  NNADHIQNFKWEMMKMFE TDLGLMSYFLGIEIKQGQGEVFICQ KYAK+ILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFM+CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG

Query:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE
        FSDSDWGGSIDDMRSTLGYCFTLSS VFSWS KKQEIVAQSTAE EFIA T TANQALWLRKILLDLDLE
Subjt:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE

A0A5D3E2V7 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-22386.17Show/hide
Query:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD
        MKFKFF SSIEEEDDRQNEIVDD SVRGTRLLSDIYERCNV VCEPAN AEAKKDQRW+AAMEEELSMIEKNKTWILVDRPQDRKVI VKWVFRTKLNAD
Subjt:  MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNAD

Query:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR
        GSINKHKARLVVK YAQI GVDYSDTFAP                                           P+GCEKQGE NKVYLLKKALYGLKQAPR
Subjt:  GSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPR

Query:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK
        AWYSKIDEHLLSLGFLKSLSESTLYVKHNGT+ILIVSLYVDDLLV  NNADHIQNFKWEMMKMFE TDLGLMSYFLGIEIKQGQGEVFICQ KYAK+ILK
Subjt:  AWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILK

Query:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
        KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFM+CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG
Subjt:  KFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIG

Query:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE
        FSDSDWGGSIDDMRSTLGYCFTLSS VFSWS KKQEIVAQSTAE EFIA T TANQALWLRKILLDLDLE
Subjt:  FSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDLE

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.4e-5933.65Show/hide
Query:  WVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNADGSINKHKARLVVKWYAQIVGVDYSDTFAP----------------------------
        W  A+  EL+  + N TW +  RP+++ ++  +WVF  K N  G+  ++KARLV + + Q   +DY +TFAP                            
Subjt:  WVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNADGSINKHKARLVVKWYAQIVGVDYSDTFAP----------------------------

Query:  ---------------PKGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYV--KHNGTSILIVSLYVDDLLVIENNADHIQN
                       P+G     +   V  L KA+YGLKQA R W+   ++ L    F+ S  +  +Y+  K N    + V LYVDD+++   +   + N
Subjt:  ---------------PKGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYV--KHNGTSILIVSLYVDDLLVIENNADHIQN

Query:  FKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQK---EKLCKEDGADKVDEGYFRSLIGCLMY-LTATRPDI
        FK  +M+ F  TDL  + +F+GI I+  + ++++ Q+ Y KKIL KF M+ C AVSTP+  K   E L  ++  +       RSLIGCLMY +  TRPD+
Subjt:  FKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQK---EKLCKEDGADKVDEGYFRSLIGCLMY-LTATRPDI

Query:  LNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEF--KLIGFSDSDWGGSIDDMRSTLGYCFTL-SSSVFSWSLKKQEIVAQSTAEVEFI
          AV+ILSR+    +    +  KRV+RY+KGT D  + F +   F  K+IG+ DSDW GS  D +ST GY F +   ++  W+ K+Q  VA S+ E E++
Subjt:  LNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEF--KLIGFSDSDWGGSIDDMRSTLGYCFTL-SSSVFSWSLKKQEIVAQSTAEVEFI

Query:  AVTTTANQALWLRKILLDLDLE
        A+     +ALWL+ +L  ++++
Subjt:  AVTTTANQALWLRKILLDLDLE

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.5e-6134.13Show/hide
Query:  AMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNADGSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------
        AM+EE+  ++KN T+ LV+ P+ ++ ++ KWVF+ K + D  + ++KARLVVK + Q  G+D+ + F+P                               
Subjt:  AMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNADGSINKHKARLVVKWYAQIVGVDYSDTFAP-------------------------------

Query:  ------------PKGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKH-NGTSILIVSLYVDDLLVIENNADHIQNFKWE
                    P+G E  G+ + V  L K+LYGLKQAPR WY K D  + S  +LK+ S+  +Y K  +  + +I+ LYVDD+L++  +   I   K +
Subjt:  ------------PKGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKH-NGTSILIVSLYVDDLLVIENNADHIQNFKWE

Query:  MMKMFERTDLGLMSYFLGIEI--KQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEG------YFRSLIGCLMY-LTATRPD
        + K F+  DLG     LG++I  ++   ++++ Q KY +++L++F M   K VSTP+    KL K+     V+E        + S +G LMY +  TRPD
Subjt:  MMKMFERTDLGLMSYFLGIEI--KQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEG------YFRSLIGCLMY-LTATRPD

Query:  ILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAV
        I +AV ++SRF+    + H +A K ++RY++GT+   + F  G +  L G++D+D  G ID+ +S+ GY FT S    SW  K Q+ VA ST E E+IA 
Subjt:  ILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAV

Query:  TTTANQALWLRKILLDLDL
        T T  + +WL++ L +L L
Subjt:  TTTANQALWLRKILLDLDL

P92519 Uncharacterized mitochondrial protein AtMg008109.0e-3538.29Show/hide
Query:  LYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSL
        LYVDD+L+  ++   +    +++   F   DLG + YFLGI+IK     +F+ Q KYA++IL    M +CK +STP+  K        A   D   FRS+
Subjt:  LYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSL

Query:  IGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEI
        +G L YLT TRPDI  AV+I+ + M+  +       KRV+RYVKGT   G+   +  +  +  F DSDW G     RST G+C  L  ++ SWS K+Q  
Subjt:  IGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEI

Query:  VAQSTAEVEFIAVTTTANQALW
        V++S+ E E+ A+  TA +  W
Subjt:  VAQSTAEVEFIAVTTTANQALW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.6e-7035.92Show/hide
Query:  EPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDR-KVIRVKWVFRTKLNADGSINKHKARLVVKWYAQIVGVDYSDTFAP--------------
        EP    +A KD+RW  AM  E++    N TW LV  P     ++  +W+F  K N+DGS+N++KARLV K Y Q  G+DY++TF+P              
Subjt:  EPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDR-KVIRVKWVFRTKLNADGSINKHKARLVVKWYAQIVGVDYSDTFAP--------------

Query:  -----------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDL
                                     P G   +   N V  L+KALYGLKQAPRAWY ++  +LL++GF+ S+S+++L+V   G SI+ + +YVDD+
Subjt:  -----------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDL

Query:  LVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMY
        L+  N+   + N    + + F   D   + YFLGIE K+    + + Q +Y   +L +  M   K V+TPM    KL    G    D   +R ++G L Y
Subjt:  LVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMY

Query:  LTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTA
        L  TRPDI  AV+ LS+FM+  +E HL+A KR++RY+ GT + G+   +G    L  +SD+DW G  DD  ST GY   L     SWS KKQ+ V +S+ 
Subjt:  LTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTA

Query:  EVEFIAVTTTANQALWLRKILLDLDL
        E E+ +V  T+++  W+  +L +L +
Subjt:  EVEFIAVTTTANQALWLRKILLDLDL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.2e-6734.43Show/hide
Query:  EPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDR-KVIRVKWVFRTKLNADGSINKHKARLVVKWYAQIVGVDYSDTFAP--------------
        EP    +A KD RW  AM  E++    N TW LV  P     ++  +W+F  K N+DGS+N++KARLV K Y Q  G+DY++TF+P              
Subjt:  EPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDR-KVIRVKWVFRTKLNADGSINKHKARLVVKWYAQIVGVDYSDTFAP--------------

Query:  -----------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDL
                                     P G   +   + V  L+KA+YGLKQAPRAWY ++  +LL++GF+ S+S+++L+V   G SI+ + +YVDD+
Subjt:  -----------------------------PKGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDL

Query:  LVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMY
        L+  N+   +++    + + F   +   + YFLGIE K+    + + Q +Y   +L +  M   K V+TPM    KL    G    D   +R ++G L Y
Subjt:  LVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMY

Query:  LTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTA
        L  TRPD+  AV+ LS++M+  ++ H  A KRV+RY+ GT D G+   +G    L  +SD+DW G  DD  ST GY   L     SWS KKQ+ V +S+ 
Subjt:  LTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTA

Query:  EVEFIAVTTTANQALWLRKILLDLDLE
        E E+ +V  T+++  W+  +L +L ++
Subjt:  EVEFIAVTTTANQALWLRKILLDLDLE

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.7e-6834.48Show/hide
Query:  CNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNADGSINKHKARLVVKWYAQIVGVDYSDTFA----------
        C     EP+   EAK+   W  AM++E+  +E   TW +   P ++K I  KWV++ K N+DG+I ++KARLV K Y Q  G+D+ +TF+          
Subjt:  CNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNADGSINKHKARLVVKWYAQIVGVDYSDTFA----------

Query:  ----------------------------------PPKGCEKQGEG---NKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSIL
                                          PP    +QG+    N V  LKK++YGLKQA R W+ K    L+  GF++S S+ T ++K   T  L
Subjt:  ----------------------------------PPKGCEKQGEG---NKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSIL

Query:  IVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYF
         V +YVDD+++  NN   +   K ++   F+  DLG + YFLG+EI +    + ICQ KYA  +L +  +  CK  S PM+         G D VD   +
Subjt:  IVSLYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYF

Query:  RSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKK
        R LIG LMYL  TR DI  AV+ LS+F       H +A  +++ Y+KGT   G+ ++   E +L  FSD+ +    D  RST GYC  L +S+ SW  KK
Subjt:  RSLIGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKK

Query:  QEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDL
        Q++V++S+AE E+ A++   ++ +WL +   +L L
Subjt:  QEIVAQSTAEVEFIAVTTTANQALWLRKILLDLDL

ATMG00240.1 Gag-Pol-related retrotransposon family protein7.1e-1140.51Show/hide
Query:  MYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYC
        MYLT TRPD+  AV+ LS+F   +    ++A  +V+ YVKGT   G+ ++   + +L  F+DSDW    D  RS  G+C
Subjt:  MYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein6.4e-3638.29Show/hide
Query:  LYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSL
        LYVDD+L+  ++   +    +++   F   DLG + YFLGI+IK     +F+ Q KYA++IL    M +CK +STP+  K        A   D   FRS+
Subjt:  LYVDDLLVIENNADHIQNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSL

Query:  IGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEI
        +G L YLT TRPDI  AV+I+ + M+  +       KRV+RYVKGT   G+   +  +  +  F DSDW G     RST G+C  L  ++ SWS K+Q  
Subjt:  IGCLMYLTATRPDILNAVSILSRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEI

Query:  VAQSTAEVEFIAVTTTANQALW
        V++S+ E E+ A+  TA +  W
Subjt:  VAQSTAEVEFIAVTTTANQALW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)1.1e-1644.71Show/hide
Query:  EPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNADGSINKHKARLVVKWYAQIVGVDYSDTFAP
        EP +   A KD  W  AM+EEL  + +NKTWILV  P ++ ++  KWVF+TKL++DG++++ KARLV K + Q  G+ + +T++P
Subjt:  EPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNADGSINKHKARLVVKWYAQIVGVDYSDTFAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCAAGTTTTTTTATTCAAGCATTGAAGAGGAAGATGACAGGCAGAATGAAATAGTAGATGATACTTCCGTGAGAGGAACAAGGTTACTTTCTGATATT
TATGAAAGGTGCAATGTTGTTGTGTGTGAACCTGCAAATTGTGCAGAAGCAAAGAAAGATCAAAGGTGGGTAGCTGCAATGGAGGAGGAGTTGTCAATGATAGAG
AAGAACAAAACTTGGATCCTTGTTGACAGACCTCAAGATAGGAAGGTAATTAGAGTTAAATGGGTGTTTAGAACCAAGCTTAATGCTGATGGCTCAATTAACAAG
CACAAAGCCAGGCTTGTGGTTAAATGGTATGCTCAAATCGTTGGTGTTGATTACTCTGATACTTTTGCTCCTCCCAAAGGATGTGAGAAGCAAGGTGAAGGAAAT
AAAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGAGCTTGGTATAGCAAAATTGATGAACATTTATTGAGCTTGGGATTTTTGAAAAGT
CTGTCAGAATCAACCTTATATGTTAAGCACAATGGTACTAGCATTCTTATTGTTTCACTGTATGTTGATGACCTACTGGTTATAGAAAACAATGCAGATCATATT
CAAAATTTCAAATGGGAGATGATGAAGATGTTTGAAAGGACAGATCTCGGGCTCATGTCCTACTTTCTTGGCATAGAGATCAAGCAAGGGCAAGGTGAAGTTTTC
ATCTGCCAGAACAAATATGCAAAGAAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCAGTAAGCACTCCAATGAATCAAAAAGAGAAGTTGTGCAAAGAA
GATGGTGCTGACAAAGTTGATGAAGGATATTTCAGGAGTTTAATTGGTTGCTTGATGTATCTCACAGCAACAAGACCTGATATTTTGAATGCTGTGAGTATTTTG
TCTCGTTTCATGTATTGTGCAAGTGAATTACATCTCAAGGCAGCAAAAAGAGTGATTCGATATGTCAAAGGCACAAGTGATTTTGGTGTTAAGTTCACTAGGGGC
AAGGAGTTCAAGCTGATTGGTTTTTCTGATAGTGATTGGGGAGGTTCCATTGATGATATGAGAAGCACATTAGGCTACTGTTTTACTCTTAGCTCTAGTGTTTTC
TCTTGGAGCTTGAAAAAGCAAGAGATTGTAGCCCAATCCACTGCTGAAGTAGAATTTATTGCTGTAACAACTACTGCCAATCAAGCTTTATGGCTGAGGAAAATT
TTACTTGACCTTGATCTGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATTCAAGTTTTTTTATTCAAGCATTGAAGAGGAAGATGACAGGCAGAATGAAATAGTAGATGATACTTCCGTGAGAGGAACAAGGTTACTTTCTGATATT
TATGAAAGGTGCAATGTTGTTGTGTGTGAACCTGCAAATTGTGCAGAAGCAAAGAAAGATCAAAGGTGGGTAGCTGCAATGGAGGAGGAGTTGTCAATGATAGAG
AAGAACAAAACTTGGATCCTTGTTGACAGACCTCAAGATAGGAAGGTAATTAGAGTTAAATGGGTGTTTAGAACCAAGCTTAATGCTGATGGCTCAATTAACAAG
CACAAAGCCAGGCTTGTGGTTAAATGGTATGCTCAAATCGTTGGTGTTGATTACTCTGATACTTTTGCTCCTCCCAAAGGATGTGAGAAGCAAGGTGAAGGAAAT
AAAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGAGCTTGGTATAGCAAAATTGATGAACATTTATTGAGCTTGGGATTTTTGAAAAGT
CTGTCAGAATCAACCTTATATGTTAAGCACAATGGTACTAGCATTCTTATTGTTTCACTGTATGTTGATGACCTACTGGTTATAGAAAACAATGCAGATCATATT
CAAAATTTCAAATGGGAGATGATGAAGATGTTTGAAAGGACAGATCTCGGGCTCATGTCCTACTTTCTTGGCATAGAGATCAAGCAAGGGCAAGGTGAAGTTTTC
ATCTGCCAGAACAAATATGCAAAGAAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCAGTAAGCACTCCAATGAATCAAAAAGAGAAGTTGTGCAAAGAA
GATGGTGCTGACAAAGTTGATGAAGGATATTTCAGGAGTTTAATTGGTTGCTTGATGTATCTCACAGCAACAAGACCTGATATTTTGAATGCTGTGAGTATTTTG
TCTCGTTTCATGTATTGTGCAAGTGAATTACATCTCAAGGCAGCAAAAAGAGTGATTCGATATGTCAAAGGCACAAGTGATTTTGGTGTTAAGTTCACTAGGGGC
AAGGAGTTCAAGCTGATTGGTTTTTCTGATAGTGATTGGGGAGGTTCCATTGATGATATGAGAAGCACATTAGGCTACTGTTTTACTCTTAGCTCTAGTGTTTTC
TCTTGGAGCTTGAAAAAGCAAGAGATTGTAGCCCAATCCACTGCTGAAGTAGAATTTATTGCTGTAACAACTACTGCCAATCAAGCTTTATGGCTGAGGAAAATT
TTACTTGACCTTGATCTGGAGTAG
Protein sequenceShow/hide protein sequence
MKFKFFYSSIEEEDDRQNEIVDDTSVRGTRLLSDIYERCNVVVCEPANCAEAKKDQRWVAAMEEELSMIEKNKTWILVDRPQDRKVIRVKWVFRTKLNADGSINK
HKARLVVKWYAQIVGVDYSDTFAPPKGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTSILIVSLYVDDLLVIENNADHI
QNFKWEMMKMFERTDLGLMSYFLGIEIKQGQGEVFICQNKYAKKILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSIL
SRFMYCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSSVFSWSLKKQEIVAQSTAEVEFIAVTTTANQALWLRKI
LLDLDLE