; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0162601 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0162601
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr06:11561509..11562573
RNA-Seq ExpressionCmc06g0162601
SyntenyCmc06g0162601
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0007034 - vacuolar transport (biological process)
GO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0005768 - endosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0047938 - glucose-6-phosphate 1-epimerase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025132.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.6e-14168.84Show/hide
Query:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS
        +KSW   DQGYLVECR LE   +   E   +        +  IL K+ DVFE    LPP+R IEHHI+LK G +PVNVRPY YA QQK EME+LVDEM+S
Subjt:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS

Query:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG
        SGII+P  SPYSS VLLV+K DGSWRFC++YRALNN TVPDKFPIPV+EELFDELNGA++FSKIDLKAGYHQIRMH EDIEKTAFRTHEGHYEF+VMPFG
Subjt:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG

Query:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK
        LTNAP+TFQ+L+N VF+ +LR+FVLVFFD ILIYS+GMEEH  HLE+VLE+LRE +LYAN  KC+FA  ++ YLGH +S KG+EVDPEKIR++K+WP   
Subjt:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK

Query:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQE
        N  E+RG LGLTGYYRRFVQNYGSI+APLTQ+LK GA+KW +E + AF +L++
Subjt:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQE

KAA0037155.1 peroxidase 64 [Cucumis melo var. makuwa]1.6e-199100Show/hide
Query:  GYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNS
        GYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNS
Subjt:  GYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNS

Query:  PYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQ
        PYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQ
Subjt:  PYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQ

Query:  SLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSL
        SLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSL
Subjt:  SLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSL

Query:  GLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQEL
        GLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQEL
Subjt:  GLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQEL

KAA0061363.1 peroxidase 64 [Cucumis melo var. makuwa]3.0e-15880.29Show/hide
Query:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS
        MK+WTDSDQGYLVECRAL+ GV+L EE   EE N  P +VQ +L K+NDVFEW ETLPPRRAIEH IH+K GT PVNVRPY YAF QKAEME+LVDEM+S
Subjt:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS

Query:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG
        SGIIQP NSPYSS VLLVKK DGS   C +YRA NN T+  KFPI VIEELFDELNGANLFSKIDLK GYHQIR HKED EKTAFRTHEGHYEFL+MPFG
Subjt:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG

Query:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK
        L NAPATFQSL+NS+FR Y+RKFVLVFFD ILIYSRGMEEH YHLELVLEVLREHKLYANKKKC+FA+QKVEYLGHIVSG+GVEVDPEK RSIKQW V  
Subjt:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK

Query:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNR
        N  E+ G LGL GYYRRFVQNYGSI APLTQ+LKL AFKWN+EAQLAF+R
Subjt:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNR

TYK15990.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]3.3e-14168.84Show/hide
Query:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS
        +KSW   DQGYLVECR LE   +   E   +        +  IL K+ DVFE    LPP+R IEHHI+LK G +PVNVRPY YA QQK EME+LVDEM+S
Subjt:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS

Query:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG
        SGII+P  SPYSS VLLV+K DGSWRFC++YRALNN TVPDKFPIPV+EELFDELNGA++FSKIDLKAGYHQIRMH EDIEKTAFRTHEGHYEF+VMPFG
Subjt:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG

Query:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK
        LTNAP+TFQ+L+N VF+ +LR+FVLVFFD ILIYS+GMEEH  HLE+VLE+LRE +LYAN  KC+FA  ++ YLGH +S KG+EVDPEKIR++K+WP   
Subjt:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK

Query:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQE
        N  E+RG LGLTGYYRRFVQNYGSI+APLTQ+LK GA+KW +E + AF +L++
Subjt:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQE

TYK23090.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]3.3e-14168.84Show/hide
Query:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS
        +KSW   DQGYLVECR LE   +   E   +        +  IL K+ DVFE    LPP+R IEHHI+LK G +PVNVRPY YA QQK EME+LVDEM+S
Subjt:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS

Query:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG
        SGII+P  SPYSS VLLV+K DGSWRFC++YRALNN TVPDKFPIPV+EELFDELNGA++FSKIDLKAGYHQIRMH EDIEKTAFRTHEGHYEF+VMPFG
Subjt:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG

Query:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK
        LTNAP+TFQ+L+N VF+ +LR+FVLVFFD ILIYS+GMEEH  HLE+VLE+LRE +LYAN  KC+FA  ++ YLGH +S KG+EVDPEKIR++K+WP   
Subjt:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK

Query:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQE
        N  E+RG LGLTGYYRRFVQNYGSI+APLTQ+LK GA+KW +E + AF +L++
Subjt:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQE

TrEMBL top hitse value%identityAlignment
A0A5A7SIV7 Ty3/gypsy retrotransposon protein1.2e-14168.84Show/hide
Query:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS
        +KSW   DQGYLVECR LE   +   E   +        +  IL K+ DVFE    LPP+R IEHHI+LK G +PVNVRPY YA QQK EME+LVDEM+S
Subjt:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS

Query:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG
        SGII+P  SPYSS VLLV+K DGSWRFC++YRALNN TVPDKFPIPV+EELFDELNGA++FSKIDLKAGYHQIRMH EDIEKTAFRTHEGHYEF+VMPFG
Subjt:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG

Query:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK
        LTNAP+TFQ+L+N VF+ +LR+FVLVFFD ILIYS+GMEEH  HLE+VLE+LRE +LYAN  KC+FA  ++ YLGH +S KG+EVDPEKIR++K+WP   
Subjt:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK

Query:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQE
        N  E+RG LGLTGYYRRFVQNYGSI+APLTQ+LK GA+KW +E + AF +L++
Subjt:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQE

A0A5A7T6Q1 Peroxidase 647.6e-200100Show/hide
Query:  GYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNS
        GYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNS
Subjt:  GYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNS

Query:  PYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQ
        PYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQ
Subjt:  PYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQ

Query:  SLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSL
        SLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSL
Subjt:  SLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSL

Query:  GLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQEL
        GLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQEL
Subjt:  GLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQEL

A0A5A7TU09 Glucose-6-phosphate 1-epimerase1.6e-14167.23Show/hide
Query:  MKSWTDSDQGYLVECRALEAGVL-----LLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLV
        +K+W D D GYL+ECR+L+  +L      L  T    N  +   +  ++ ++ DVFEW E LPPRR IEHHIHLK GT P+NVRPY Y F QK EMEKLV
Subjt:  MKSWTDSDQGYLVECRALEAGVL-----LLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLV

Query:  DEMMSSGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFL
         EM++SG+I+P  SPYSS VLLVKK DGSWRFC++YRA+NNAT+PDKFPIPV+EELFDEL GA LFSKIDLK+GYHQIRM  ED+EKTAFRTHEGHYEFL
Subjt:  DEMMSSGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFL

Query:  VMPFGLTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQ
        VMPFGLTNAPATFQ+L+N++F+ +LRKFVLVFFD IL+YSR  EEH +H++ VL +LR+++LYAN+KKC+FA +K+EYLGH++SG+GV VDPEKIRSI  
Subjt:  VMPFGLTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQ

Query:  WPVLKNAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQ
        WP   N  E+RG LGLTGYYRRFV+NYG+IAAPLTQ LK G F WN+EA LAF RL+
Subjt:  WPVLKNAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQ

A0A5D3CU29 Peroxidase 641.5e-15880.29Show/hide
Query:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS
        MK+WTDSDQGYLVECRAL+ GV+L EE   EE N  P +VQ +L K+NDVFEW ETLPPRRAIEH IH+K GT PVNVRPY YAF QKAEME+LVDEM+S
Subjt:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS

Query:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG
        SGIIQP NSPYSS VLLVKK DGS   C +YRA NN T+  KFPI VIEELFDELNGANLFSKIDLK GYHQIR HKED EKTAFRTHEGHYEFL+MPFG
Subjt:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG

Query:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK
        L NAPATFQSL+NS+FR Y+RKFVLVFFD ILIYSRGMEEH YHLELVLEVLREHKLYANKKKC+FA+QKVEYLGHIVSG+GVEVDPEK RSIKQW V  
Subjt:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK

Query:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNR
        N  E+ G LGL GYYRRFVQNYGSI APLTQ+LKL AFKWN+EAQLAF+R
Subjt:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNR

A0A5D3CXB1 Ty3/gypsy retrotransposon protein1.6e-14168.84Show/hide
Query:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS
        +KSW   DQGYLVECR LE   +   E   +        +  IL K+ DVFE    LPP+R IEHHI+LK G +PVNVRPY YA QQK EME+LVDEM+S
Subjt:  MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMS

Query:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG
        SGII+P  SPYSS VLLV+K DGSWRFC++YRALNN TVPDKFPIPV+EELFDELNGA++FSKIDLKAGYHQIRMH EDIEKTAFRTHEGHYEF+VMPFG
Subjt:  SGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFG

Query:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK
        LTNAP+TFQ+L+N VF+ +LR+FVLVFFD ILIYS+GMEEH  HLE+VLE+LRE +LYAN  KC+FA  ++ YLGH +S KG+EVDPEKIR++K+WP   
Subjt:  LTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLK

Query:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQE
        N  E+RG LGLTGYYRRFVQNYGSI+APLTQ+LK GA+KW +E + AF +L++
Subjt:  NAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQE

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.64.6e-6139.09Show/hide
Query:  NNNAPEEVQKILAKYNDV-FEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLV-KKTDGS----WR
        NN   + +  +L KY+D+ +   + L      +H I+ K      +   Y  A++Q  E+E  + +M++ GII+  NSPY+S + +V KK D S    +R
Subjt:  NNNAPEEVQKILAKYNDV-FEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLV-KKTDGS----WR

Query:  FCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLVNSVFRFYLRKFVLV
          ++YR LN  TV D+ PIP ++E+  +L   N F+ IDL  G+HQI M  E + KTAF T  GHYE+L MPFGL NAPATFQ  +N + R  L K  LV
Subjt:  FCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLVNSVFRFYLRKFVLV

Query:  FFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSLGLTGYYRRFVQNYGSIA
        + D I+++S  ++EH   L LV E L +  L     KC F  Q+  +LGH+++  G++ +PEKI +I+++P+     E++  LGLTGYYR+F+ N+  IA
Subjt:  FFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSLGLTGYYRRFVQNYGSIA

Query:  APLTQMLK--LGAFKWNDEAQLAFNRLQEL
         P+T+ LK  +     N E   AF +L+ L
Subjt:  APLTQMLK--LGAFKWNDEAQLAFNRLQEL

P20825 Retrovirus-related Pol polyprotein from transposon 2974.3e-5939.61Show/hide
Query:  NNNAPEEVQKILAKYNDV-FEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLV-KKTDGS----WR
        N     +++ +L K+ ++ ++  E L     I+H ++  T   P+  + Y  A   + E+E  V EM++ G+I+  NSPY+S   +V KK D S    +R
Subjt:  NNNAPEEVQKILAKYNDV-FEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLV-KKTDGS----WR

Query:  FCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLVNSVFRFYLRKFVLV
          ++YR LN  T+PD++PIP ++E+  +L     F+ IDL  G+HQI M +E I KTAF T  GHYE+L MPFGL NAPATFQ  +N++ R  L K  LV
Subjt:  FCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLVNSVFRFYLRKFVLV

Query:  FFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSLGLTGYYRRFVQNYGSIA
        + D I+I+S  + EH   ++LV   L +  L     KC F  ++  +LGHIV+  G++ +P K+++I  +P+     E+R  LGLTGYYR+F+ NY  IA
Subjt:  FFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSLGLTGYYRRFVQNYGSIA

Query:  APLTQMLK
         P+T  LK
Subjt:  APLTQMLK

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.1e-5738.34Show/hide
Query:  KYNDVFEWSETLPPRRA------IEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATV
        KY ++      LPPR A      ++H I +K G     ++PY    + + E+ K+V +++ +  I P  SP SS V+LV K DG++R C++YR LN AT+
Subjt:  KYNDVFEWSETLPPRRA------IEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATV

Query:  PDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGME
         D FP+P I+ L   +  A +F+ +DL +GYHQI M  +D  KTAF T  G YE+ VMPFGL NAP+TF   +   FR    +FV V+ D ILI+S   E
Subjt:  PDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGME

Query:  EHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFK
        EH  HL+ VLE L+   L   KKKC FA ++ E+LG+ +  + +     K  +I+ +P  K   + +  LG+  YYRRF+ N   IA P+ Q+      +
Subjt:  EHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFK

Query:  WNDEAQLAFNRLQ
        W ++   A  +L+
Subjt:  WNDEAQLAFNRLQ

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus1.5e-5635.87Show/hide
Query:  EENNNAPEEVQKILAKYNDVFEWSETLPP------RRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLVKKT---
        E  +   E +  +L ++  +FE     PP        A++  I   T  +P+  + Y Y    + E+E+ +DE++  GII+P NSPY+S + +V K    
Subjt:  EENNNAPEEVQKILAKYNDVFEWSETLPP------RRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLVKKT---

Query:  --DGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLVNSVFRFY
          +  +R  ++++ LN  T+PD +PIP I      L  A  F+ +DL +G+HQI M + DI KTAF T  G YEFL +PFGL NAPA FQ +++ + R +
Subjt:  --DGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLVNSVFRFY

Query:  LRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSLGLTGYYRRFV
        + K   V+ D I+++S   + H  +L LVL  L +  L  N +K +F   +VE+LG+IV+  G++ DP+K+R+I + P   +  E++  LG+T YYR+F+
Subjt:  LRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSLGLTGYYRRFV

Query:  QNYGSIAAPLTQMLK
        Q+Y  +A PLT + +
Subjt:  QNYGSIAAPLTQMLK

Q99315 Transposon Ty3-G Gag-Pol polyprotein4.8e-5838.22Show/hide
Query:  KYNDVFEWSETLPPRRA------IEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATV
        KY ++      LPPR A      ++H I +K G     ++PY    + + E+ K+V +++ +  I P  SP SS V+LV K DG++R C++YR LN AT+
Subjt:  KYNDVFEWSETLPPRRA------IEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATV

Query:  PDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGME
         D FP+P I+ L   +  A +F+ +DL +GYHQI M  +D  KTAF T  G YE+ VMPFGL NAP+TF   +   FR    +FV V+ D ILI+S   E
Subjt:  PDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGME

Query:  EHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFK
        EH  HL+ VLE L+   L   KKKC FA ++ E+LG+ +  + +     K  +I+ +P  K   + +  LG+  YYRRF+ N   IA P+ Q+      +
Subjt:  EHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFK

Query:  WNDEAQLAFNRLQE
        W ++   A ++L++
Subjt:  WNDEAQLAFNRLQE

Arabidopsis top hitse value%identityAlignment
ATMG00850.1 DNA/RNA polymerases superfamily protein5.3e-0448.72Show/hide
Query:  QKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLVKKTDGSW
        ++  ++  + EM+ + IIQP  SPYSS VLLV+K DG W
Subjt:  QKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLVKKTDGSW

ATMG00860.1 DNA/RNA polymerases superfamily protein1.3e-2952.25Show/hide
Query:  HLELVLEVLREHKLYANKKKCNFAYQKVEYLG--HIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWN
        HL +VL++  +H+ YAN+KKC F   ++ YLG  HI+SG+GV  DP K+ ++  WP  KN  E+RG LGLTGYYRRFV+NYG I  PLT++LK  + KW 
Subjt:  HLELVLEVLREHKLYANKKKCNFAYQKVEYLG--HIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSLGLTGYYRRFVQNYGSIAAPLTQMLKLGAFKWN

Query:  DEAQLAFNRLQ
        + A LAF  L+
Subjt:  DEAQLAFNRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTTGGACTGACTCTGATCAGGGGTATTTGGTGGAGTGCAGAGCATTGGAAGCAGGTGTACTATTGCTTGAAGAAACAACTGTTGAAGAAAATAACAAT
GCACCCGAAGAAGTACAGAAGATATTAGCCAAGTATAATGATGTATTTGAATGGTCGGAGACACTACCTCCAAGGAGAGCTATAGAGCATCATATACACTTGAAG
ACAGGGACTGAACCAGTGAATGTAAGACCCTACTGGTATGCATTTCAACAAAAAGCTGAGATGGAAAAACTTGTAGATGAGATGATGTCTTCAGGAATCATACAG
CCCGATAACAGTCCATACTCCAGTCTAGTGTTACTAGTGAAGAAAACAGATGGGAGCTGGAGATTCTGCATGAACTATCGTGCCCTCAATAATGCTACTGTGCCA
GATAAGTTTCCTATTCCTGTTATTGAGGAATTATTTGATGAATTGAATGGAGCTAATCTATTTTCTAAGATCGACTTAAAGGCTGGTTATCACCAGATTAGAATG
CATAAGGAGGATATTGAAAAGACAGCCTTCAGGACCCATGAGGGACACTACGAATTTTTAGTAATGCCCTTTGGGTTAACGAATGCTCCAGCTACATTTCAGTCC
CTCGTGAACTCTGTTTTTCGATTTTATTTGAGAAAATTTGTTCTGGTTTTTTTTGATTATATATTGATATACAGTAGGGGTATGGAGGAACATGCATATCATTTA
GAACTTGTGCTTGAAGTGCTGCGTGAACATAAACTATATGCAAACAAGAAAAAGTGCAACTTTGCTTATCAGAAAGTAGAATATCTCGGCCATATTGTCTCAGGA
AAAGGTGTGGAGGTTGATCCTGAAAAGATCAGATCGATTAAGCAATGGCCTGTGCTGAAGAATGCGGGAGAAGTCCGTGGATCCCTAGGGCTCACCGGTTATTAT
AGAAGATTTGTGCAGAACTATGGATCCATTGCAGCACCTTTGACTCAGATGCTGAAATTGGGAGCATTTAAGTGGAATGATGAGGCTCAATTGGCTTTTAATCGG
TTGCAAGAACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTTGGACTGACTCTGATCAGGGGTATTTGGTGGAGTGCAGAGCATTGGAAGCAGGTGTACTATTGCTTGAAGAAACAACTGTTGAAGAAAATAACAAT
GCACCCGAAGAAGTACAGAAGATATTAGCCAAGTATAATGATGTATTTGAATGGTCGGAGACACTACCTCCAAGGAGAGCTATAGAGCATCATATACACTTGAAG
ACAGGGACTGAACCAGTGAATGTAAGACCCTACTGGTATGCATTTCAACAAAAAGCTGAGATGGAAAAACTTGTAGATGAGATGATGTCTTCAGGAATCATACAG
CCCGATAACAGTCCATACTCCAGTCTAGTGTTACTAGTGAAGAAAACAGATGGGAGCTGGAGATTCTGCATGAACTATCGTGCCCTCAATAATGCTACTGTGCCA
GATAAGTTTCCTATTCCTGTTATTGAGGAATTATTTGATGAATTGAATGGAGCTAATCTATTTTCTAAGATCGACTTAAAGGCTGGTTATCACCAGATTAGAATG
CATAAGGAGGATATTGAAAAGACAGCCTTCAGGACCCATGAGGGACACTACGAATTTTTAGTAATGCCCTTTGGGTTAACGAATGCTCCAGCTACATTTCAGTCC
CTCGTGAACTCTGTTTTTCGATTTTATTTGAGAAAATTTGTTCTGGTTTTTTTTGATTATATATTGATATACAGTAGGGGTATGGAGGAACATGCATATCATTTA
GAACTTGTGCTTGAAGTGCTGCGTGAACATAAACTATATGCAAACAAGAAAAAGTGCAACTTTGCTTATCAGAAAGTAGAATATCTCGGCCATATTGTCTCAGGA
AAAGGTGTGGAGGTTGATCCTGAAAAGATCAGATCGATTAAGCAATGGCCTGTGCTGAAGAATGCGGGAGAAGTCCGTGGATCCCTAGGGCTCACCGGTTATTAT
AGAAGATTTGTGCAGAACTATGGATCCATTGCAGCACCTTTGACTCAGATGCTGAAATTGGGAGCATTTAAGTGGAATGATGAGGCTCAATTGGCTTTTAATCGG
TTGCAAGAACTATGA
Protein sequenceShow/hide protein sequence
MKSWTDSDQGYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHLKTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQ
PDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQS
LVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVLEVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSLGLTGYY
RRFVQNYGSIAAPLTQMLKLGAFKWNDEAQLAFNRLQEL