| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.1e-178 | 87.11 | Show/hide |
Query: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
+FPAISAP TD+T+FQWHLRLGHASS+KLRSL S G LNNVS+F+T D L+CK+AKQ ALSFP SASLCDKPFGLIHSDIWGPAPC TVNGY YFVLFID
Subjt: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
Query: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
DYSRFTWIYFL+NRSSLYQI V+F NM+QTQFSS IKILRTDNAM+YKDSRFLSFL QQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS SCP+
Subjt: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
Query: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
FWGEAA+TSVYVINRLPSQVIHNISPFERL+GTPP+YS+LK+FGC CFVLLH HEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Subjt: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Query: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
MFSSLSSFHASLSS SFFTDPST LFPTPDSP NT PPL+SELT S
Subjt: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
|
|
| KAA0037189.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.1e-195 | 91.96 | Show/hide |
Query: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVN
Subjt: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
Query: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
DVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
Subjt: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
Query: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Subjt: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Query: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSLRSRIFHLSPLRNLNLRLSDDPLG
MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSLRSRIFHLSPLRNLNLRLSDDPLG
Subjt: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSLRSRIFHLSPLRNLNLRLSDDPLG
|
|
| KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.1e-178 | 87.11 | Show/hide |
Query: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
+FPAISAP TD+T+FQWHLRLGHASS+KLRSL S G LNNVS+F+T D L+CK+AKQ ALSFP SASLCDKPFGLIHSDIWGPAPC TVNGY YFVLFID
Subjt: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
Query: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
DYSRFTWIYFL+NRSSLYQI V+F NM+QTQFSS IKILRTDNAM+YKDSRFLSFL QQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS SCP+
Subjt: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
Query: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
FWGEAA+TSVYVINRLPSQVIHNISPFERL+GTPP+YS+LK+FGC CFVLLH HEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Subjt: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Query: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
MFSSLSSFHASLSS SFFTDPST LFPTPDSP NT PPL+SELT S
Subjt: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
|
|
| KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.1e-178 | 87.11 | Show/hide |
Query: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
+FPAISAP TD+T+FQWHLRLGHASS+KLRSL S G LNNVS+F+T D L+CK+AKQ ALSFP SASLCDKPFGLIHSDIWGPAPC TVNGY YFVLFID
Subjt: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
Query: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
DYSRFTWIYFL+NRSSLYQI V+F NM+QTQFSS IKILRTDNAM+YKDSRFLSFL QQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS SCP+
Subjt: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
Query: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
FWGEAA+TSVYVINRLPSQVIHNISPFERL+GTPP+YS+LK+FGC CFVLLH HEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Subjt: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Query: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
MFSSLSSFHASLSS SFFTDPST LFPTPDSP NT PPL+SELT S
Subjt: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
|
|
| TYK19656.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.0e-149 | 76.51 | Show/hide |
Query: PAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFIDDY
P+ISAP TD +QWHLRLGHAS +KLR L S +LN+++KF + LNCKLAKQ ALSF S S+CDKPF LIHSDIWGPAP +TV+GY Y+VLFIDD+
Subjt: PAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFIDDY
Query: SRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKNFW
SRFTWIYFLK+RS L + +EF NM++TQFS IK LRTDNA++YKDS LSFL+QQGTL+QRSCPHTSQQNGRAERKHRHILDSVRA LLSASCP+ FW
Subjt: SRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKNFW
Query: GEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMF
GEAA+TSVY INRLPS V+ NISPFERL+GTPP+YSNLK+FGC CFVLL PHEHTKLEPRARLCCFLGYGTEHKGFRCWDP+S RLRISRHVTFWEH MF
Subjt: GEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMF
Query: SSLSSFHASLSSSQSFFTDPSTTLFPTPDSPP
S LSSFHAS SS QSFFTD S LFP +S P
Subjt: SSLSSFHASLSSSQSFFTDPSTTLFPTPDSPP
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-178 | 87.11 | Show/hide |
Query: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
+FPAISAP TD+T+FQWHLRLGHASS+KLRSL S G LNNVS+F+T D L+CK+AKQ ALSFP SASLCDKPFGLIHSDIWGPAPC TVNGY YFVLFID
Subjt: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
Query: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
DYSRFTWIYFL+NRSSLYQI V+F NM+QTQFSS IKILRTDNAM+YKDSRFLSFL QQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS SCP+
Subjt: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
Query: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
FWGEAA+TSVYVINRLPSQVIHNISPFERL+GTPP+YS+LK+FGC CFVLLH HEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Subjt: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Query: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
MFSSLSSFHASLSS SFFTDPST LFPTPDSP NT PPL+SELT S
Subjt: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
|
|
| A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-178 | 87.11 | Show/hide |
Query: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
+FPAISAP TD+T+FQWHLRLGHASS+KLRSL S G LNNVS+F+T D L+CK+AKQ ALSFP SASLCDKPFGLIHSDIWGPAPC TVNGY YFVLFID
Subjt: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
Query: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
DYSRFTWIYFL+NRSSLYQI V+F NM+QTQFSS IKILRTDNAM+YKDSRFLSFL QQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS SCP+
Subjt: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
Query: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
FWGEAA+TSVYVINRLPSQVIHNISPFERL+GTPP+YS+LK+FGC CFVLLH HEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Subjt: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Query: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
MFSSLSSFHASLSS SFFTDPST LFPTPDSP NT PPL+SELT S
Subjt: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
|
|
| A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.9e-149 | 76.51 | Show/hide |
Query: PAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFIDDY
P+ISAP TD +QWHLRLGHAS +KLR L S +LN+++KF + LNCKLAKQ ALSF S S+CDKPF LIHSDIWGPAP +TV+GY Y+VLFIDD+
Subjt: PAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFIDDY
Query: SRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKNFW
SRFTWIYFLK+RS L + +EF NM++TQFS IK LRTDNA++YKDS LSFL+QQGTL+QRSCPHTSQQNGRAERKHRHILDSVRA LLSASCP+ FW
Subjt: SRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKNFW
Query: GEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMF
GEAA+TSVY INRLPS V+ NISPFERL+GTPP+YSNLK+FGC CFVLL PHEHTKLEPRARLCCFLGYGTEHKGFRCWDP+S RLRISRHVTFWEH MF
Subjt: GEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMF
Query: SSLSSFHASLSSSQSFFTDPSTTLFPTPDSPP
S LSSFHAS SS QSFFTD S LFP +S P
Subjt: SSLSSFHASLSSSQSFFTDPSTTLFPTPDSPP
|
|
| A0A5D3CPU5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.4e-196 | 91.96 | Show/hide |
Query: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVN
Subjt: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
Query: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
DVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
Subjt: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
Query: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Subjt: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Query: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSLRSRIFHLSPLRNLNLRLSDDPLG
MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSLRSRIFHLSPLRNLNLRLSDDPLG
Subjt: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSLRSRIFHLSPLRNLNLRLSDDPLG
|
|
| A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-178 | 87.11 | Show/hide |
Query: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
+FPAISAP TD+T+FQWHLRLGHASS+KLRSL S G LNNVS+F+T D L+CK+AKQ ALSFP SASLCDKPFGLIHSDIWGPAPC TVNGY YFVLFID
Subjt: MFPAISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFID
Query: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
DYSRFTWIYFL+NRSSLYQI V+F NM+QTQFSS IKILRTDNAM+YKDSRFLSFL QQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLS SCP+
Subjt: DYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
Query: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
FWGEAA+TSVYVINRLPSQVIHNISPFERL+GTPP+YS+LK+FGC CFVLLH HEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Subjt: FWGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHR
Query: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
MFSSLSSFHASLSS SFFTDPST LFPTPDSP NT PPL+SELT S
Subjt: MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.9e-37 | 29.62 | Show/hide |
Query: FPAISAPATDDTIFQ-WHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKL------AKQLALSFP--NSASLCDKPFGLIHSDIWGPAPCATVNGY
F A S A F+ WH R GH S KL + ++ S + L+ L+C++ KQ L F + +P ++HSD+ GP T++
Subjt: FPAISAPATDDTIFQ-WHLRLGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKL------AKQLALSFP--NSASLCDKPFGLIHSDIWGPAPCATVNGY
Query: LYFVLFIDDYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQL
YFV+F+D ++ + Y +K +S ++ + +FV + F+ + L DN +Y + F ++G + PHT Q NG +ER R I + R +
Subjt: LYFVLFIDDYSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQL
Query: LSASCPKNFWGEAAITSVYVINRLPSQVIHNIS--PFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRI
A K+FWGEA +T+ Y+INR+PS+ + + S P+E H P +L++FG +V + ++ K + ++ F+GY E GF+ WD ++++ +
Subjt: LSASCPKNFWGEAAITSVYVINRLPSQVIHNIS--PFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRI
Query: SRHVTFWEHRMFSS
+R V E M +S
Subjt: SRHVTFWEHRMFSS
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-48 | 35.26 | Show/hide |
Query: ISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTL---DYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFIDD
++A + ++ WH R+GH S L+ LA L + +K +T+ DY C KQ +SF S+ L++SD+ GP ++ G YFV FIDD
Subjt: ISAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVSKFSTL---DYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFIDD
Query: YSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKNF
SR W+Y LK + ++Q+ +F +V+ + +K LR+DN +Y F + + G +++ P T Q NG AER +R I++ VR+ L A PK+F
Subjt: YSRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKNF
Query: WGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRM
WGEA T+ Y+INR PS + P SYS+LK+FGC F + + TKL+ ++ C F+GYG E G+R WDP+ +++ SR V F E +
Subjt: WGEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRM
Query: FSSLS-SFHASLSSSQSFFTDPSTTLFPT
++ S +F T PST+ PT
Subjt: FSSLS-SFHASLSSSQSFFTDPSTTLFPT
|
|
| Q03434 Transposon Ty1-ML2 Gag-Pol polyprotein | 9.0e-15 | 26.61 | Show/hide |
Query: HLRLGHASSDKLRSLASNGHL-----NNVSKFSTLDYL--NCKLAKQL--------ALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFIDDY
H L HA++ +R N + ++V + S +DY +C + K L + NS +PF +H+DI+GP + YF+ F D+
Subjt: HLRLGHASSDKLRSLASNGHL-----NNVSKFSTLDYL--NCKLAKQL--------ALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFIDDY
Query: SRFTWIYFLKNR--SSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
++F W+Y L +R S+ + + ++ QF +++ +++ D +Y + FL + G + S+ +G AER +R +LD R QL + P +
Subjt: SRFTWIYFLKNR--SSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKN
Query: FWGEAAITSVYVINRLPS
W A S V N L S
Subjt: FWGEAAITSVYVINRLPS
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.7e-51 | 34.15 | Show/hide |
Query: SAPATDDTIFQWHLRLGHASSDKLRSLASN---GHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFIDDY
++P++ T WH RLGH + L S+ SN LN KF L +C + K + F S +P I+SD+W +P + + Y Y+V+F+D +
Subjt: SAPATDDTIFQWHLRLGHASSDKLRSLASN---GHLNNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFIDDY
Query: SRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKNFW
+R+TW+Y LK +S + + + F N+++ +F + I +DN ++ + +Q G S PHT + NG +ERKHRHI+++ L AS PK +W
Subjt: SRFTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKNFW
Query: GEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMF
A +VY+INRLP+ ++ SPF++L GT P+Y L++FGC C+ L P+ KL+ ++R C FLGY + C + RL ISRHV F E+
Subjt: GEAAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMF
Query: SSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNT--IPYP----PLSSELTPSLRSRIFHLSPLRNLNL
S++ A+LS Q + S P P T +P P P + PS S F S + + NL
Subjt: SSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNT--IPYP----PLSSELTPSLRSRIFHLSPLRNLNL
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.6e-54 | 35.61 | Show/hide |
Query: SAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVS-KFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFIDDYSR
++P + T WH RLGH S L S+ SN L ++ L +C + K + F NS KP I+SD+W +P +++ Y Y+V+F+D ++R
Subjt: SAPATDDTIFQWHLRLGHASSDKLRSLASNGHLNNVS-KFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATVNGYLYFVLFIDDYSR
Query: FTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKNFWGE
+TW+Y LK +S + + F ++V+ +F + I L +DN ++ R +L+Q G S PHT + NG +ERKHRHI++ L AS PK +W
Subjt: FTWIYFLKNRSSLYQIDVEFVNMVQTQFSSTIKILRTDNAMKYKDSRFLSFLTQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSASCPKNFWGE
Query: AAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSS
A +VY+INRLP+ ++ SPF++L G PP+Y LK+FGC C+ L P+ KLE +++ C F+GY + C + RL SRHV F E S
Subjt: AAITSVYVINRLPSQVIHNISPFERLHGTPPSYSNLKIFGCECFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSS
Query: LSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPP
++F S S Q + P+ T + P +P PP
Subjt: LSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPP
|
|
