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Cmc06g0162971 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0162971
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionorganic cation/carnitine transporter 7
Genome locationCMiso1.1chr06:12141077..12142990
RNA-Seq ExpressionCmc06g0162971
SyntenyCmc06g0162971
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:2001142 - nicotinate transport (biological process)
GO:2001143 - N-methylnicotinate transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0090416 - nicotinate transmembrane transporter activity (molecular function)
GO:0090417 - N-methylnicotinate transmembrane transporter activity (molecular function)
InterPro domainsIPR011701 - Major facilitator superfamily
IPR020846 - Major facilitator superfamily domain
IPR036259 - MFS transporter superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036679.1 Organic cation/carnitine transporter 7 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-4685.45Show/hide
Query:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI
        MEMEERSFV+  +  Q+EDGG S RYTIDEALVSMGFGNFQILVLAYAGMGW SEAMEMMLLSF+GPAVQSAW+LSPH+ESLITSVVFAGMLVGAY+WGI
Subjt:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI

Query:  VSDKYGRRHV
        VSDKYGRR +
Subjt:  VSDKYGRRHV

XP_004140724.1 organic cation/carnitine transporter 7 isoform X1 [Cucumis sativus]3.6e-4993.52Show/hide
Query:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI
        MEMEERS VVSS+ HQV DGGESPRYTIDEALVSMGFGNFQILVLAYAGMGW+SEAMEMMLLSFVGPAVQS+WNLSPHEESLITSVVFAGMLVGAY WGI
Subjt:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI

Query:  VSDKYGRR
        VSDKYGRR
Subjt:  VSDKYGRR

XP_008456184.1 PREDICTED: organic cation/carnitine transporter 7 [Cucumis melo]2.4e-53100Show/hide
Query:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI
        MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI
Subjt:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI

Query:  VSDKYGRR
        VSDKYGRR
Subjt:  VSDKYGRR

XP_022143368.1 organic cation/carnitine transporter 7 isoform X1 [Momordica charantia]6.8e-4890.74Show/hide
Query:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI
        MEMEERSFV SS+  QVEDGGES RYTIDEAL+SMGFGNFQI VLAYAGMGW+SEAMEMMLLSFVGPAVQSAWNLSPHEES+ITSVVFAGMLVGAY+WGI
Subjt:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI

Query:  VSDKYGRR
        VSDKYGRR
Subjt:  VSDKYGRR

XP_023529009.1 organic cation/carnitine transporter 7-like isoform X1 [Cucurbita pepo subsp. pepo]4.9e-4688.68Show/hide
Query:  MEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVS
        MEER FV+S++P QVEDGGESPRYTIDEALVSMGFGN+QILVL YAGMGW+SEAMEMMLLSFVGPAVQSAW+LSP EESLITSVVFAGMLVGAY+WGIVS
Subjt:  MEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVS

Query:  DKYGRR
        D YGRR
Subjt:  DKYGRR

TrEMBL top hitse value%identityAlignment
A0A0A0L6X7 MFS domain-containing protein1.8e-4993.52Show/hide
Query:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI
        MEMEERS VVSS+ HQV DGGESPRYTIDEALVSMGFGNFQILVLAYAGMGW+SEAMEMMLLSFVGPAVQS+WNLSPHEESLITSVVFAGMLVGAY WGI
Subjt:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI

Query:  VSDKYGRR
        VSDKYGRR
Subjt:  VSDKYGRR

A0A1S3C3X5 organic cation/carnitine transporter 71.2e-53100Show/hide
Query:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI
        MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI
Subjt:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI

Query:  VSDKYGRR
        VSDKYGRR
Subjt:  VSDKYGRR

A0A5A7T162 Organic cation/carnitine transporter 71.2e-53100Show/hide
Query:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI
        MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI
Subjt:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI

Query:  VSDKYGRR
        VSDKYGRR
Subjt:  VSDKYGRR

A0A6J1CQJ3 organic cation/carnitine transporter 7 isoform X13.3e-4890.74Show/hide
Query:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI
        MEMEERSFV SS+  QVEDGGES RYTIDEAL+SMGFGNFQI VLAYAGMGW+SEAMEMMLLSFVGPAVQSAWNLSPHEES+ITSVVFAGMLVGAY+WGI
Subjt:  MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGI

Query:  VSDKYGRR
        VSDKYGRR
Subjt:  VSDKYGRR

A0A6J1FAV9 organic cation/carnitine transporter 7-like isoform X12.4e-4688.68Show/hide
Query:  MEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVS
        MEER FV+S++P QVEDGGESPRYTIDEALVSMGFGN+QILVL YAGMGW+SEAMEMMLLSFVGPAVQSAW+LSP EESLITSVVFAGMLVGAY+WGIVS
Subjt:  MEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVS

Query:  DKYGRR
        D YGRR
Subjt:  DKYGRR

SwissProt top hitse value%identityAlignment
P30638 Putative transporter svop-11.3e-1743.37Show/hide
Query:  YTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVSDKYGRR
        +T+DEA+ ++GFG FQ+ +    GM W+++AMEMMLLS + PA+   W +S  +++L+T+ VF+GM++ +  WG + D++GRR
Subjt:  YTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVSDKYGRR

Q1JP63 Synaptic vesicle 2-related protein6.1e-1535.29Show/hide
Query:  QVEDGGESPR---------YTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVSDKYG
        +++DG   P+         + +++A+ ++GFG FQ  +    G+ W+++AMEMM+LS + P +   W L   + +L+TSVVF GM+  +  WG +SD+YG
Subjt:  QVEDGGESPR---------YTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVSDKYG

Query:  RR
        R+
Subjt:  RR

Q2XWK0 Synaptic vesicle 2-related protein1.6e-1538.24Show/hide
Query:  QVEDGGESPR---------YTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVSDKYG
        ++EDG   P+         + +++A+ ++GFG FQ  +    G+ W+++AMEMM+LS + P +   W L   + +L+TSVVF GM+  +  WG VSD+YG
Subjt:  QVEDGGESPR---------YTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVSDKYG

Query:  RR
        RR
Subjt:  RR

Q8N4V2 Synaptic vesicle 2-related protein7.9e-1532.76Show/hide
Query:  EMEERSFVVSSDPHQVEDGGESPR---------YTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGML
        E++     V  +  +++DG   P+         + +++A+ ++GFG FQ  +    G+ W+++AMEMM+LS + P +   W L   + +L+TSVVF GM+
Subjt:  EMEERSFVVSSDPHQVEDGGESPR---------YTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGML

Query:  VGAYTWGIVSDKYGRR
          +  WG +SD+YGR+
Subjt:  VGAYTWGIVSDKYGRR

Q940M4 Organic cation/carnitine transporter 72.4e-3583.33Show/hide
Query:  RYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVSDKYGRR
        R+T+DEALV+MGFG FQI VLAYAGMGW++EAMEMMLLSFVGPAVQS WNLS  +ESLITSVVFAGML+GAY+WGIVSDK+GRR
Subjt:  RYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVSDKYGRR

Arabidopsis top hitse value%identityAlignment
AT3G13050.1 Major facilitator superfamily protein1.7e-3683.33Show/hide
Query:  RYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVSDKYGRR
        R+T+DEALV+MGFG FQI VLAYAGMGW++EAMEMMLLSFVGPAVQS WNLS  +ESLITSVVFAGML+GAY+WGIVSDK+GRR
Subjt:  RYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVSDKYGRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGGAGGAACGCTCCTTTGTTGTCTCTTCGGACCCTCACCAGGTGGAGGATGGAGGTGAAAGTCCGAGGTACACTATTGACGAAGCTCTTGTATCCATGGGTTT
TGGGAATTTTCAAATTCTTGTGCTTGCTTATGCTGGAATGGGATGGATTTCAGAAGCTATGGAAATGATGTTACTCTCCTTTGTTGGACCTGCAGTTCAGTCTGCGTGGA
ACCTTTCTCCCCATGAAGAGTCTTTGATCACCAGTGTGGTTTTTGCAGGGATGTTAGTTGGGGCCTATACATGGGGCATAGTTTCTGATAAATATGGACGAAGGCATGTA
TCCTCTATCTAA
mRNA sequenceShow/hide mRNA sequence
TTGTTTTGTACGTCGAAGTCTTCCGATAAAACGTGCATCATCTCCAGATCCCATAATCGATTCAGGGAATGGAAATGGAGGAACGCTCCTTTGTTGTCTCTTCGGACCCT
CACCAGGTGGAGGATGGAGGTGAAAGTCCGAGGTACACTATTGACGAAGCTCTTGTATCCATGGGTTTTGGGAATTTTCAAATTCTTGTGCTTGCTTATGCTGGAATGGG
ATGGATTTCAGAAGCTATGGAAATGATGTTACTCTCCTTTGTTGGACCTGCAGTTCAGTCTGCGTGGAACCTTTCTCCCCATGAAGAGTCTTTGATCACCAGTGTGGTTT
TTGCAGGGATGTTAGTTGGGGCCTATACATGGGGCATAGTTTCTGATAAATATGGACGAAGGCATGTATCCTCTATCTAATATCATTTCACTTTCATTAACATATGTGTA
TGCTTGATGATGTGACGTCCTTCCTCTTGTTAATGCAATTTGTGCAATCTACTTGCATCTTTTGCTTCTTCTTCTGTCTTGATGGTTCTTATGCTTCAGGCTCAGAAGAA
TTTTTTTTTTTCTTTAACCTTTTGACTGATATGGATACTCATAAAAGATTGTTTTTTATTCAGAACTTTGTAGTTGAGCGTTTACGAAAGCCTTGGTAATTCTTTTTTTC
TTTAACTTGTTCAATGTAGATTTCTTCATTATGGCAACAATCATATGTGTTGCTTGATTCCAAGTTCTTTTGCCCCAAATTGTATATCTTTGAATTTCTCTGTTTTTTTT
TTTTTTAACTTTCAGTCTTGGGGATCCTAGACTTCCTTTGTTTTTTTATTTTTAATTTTTCTCATTCAGGAAAGGTTTCTTCATTACAGCAACAATCACTTCTATTGCTG
GATTTCTGAGTGCTTTTGCCCCAAACTATACATCTTTGTTAATTCTT
Protein sequenceShow/hide protein sequence
MEMEERSFVVSSDPHQVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWISEAMEMMLLSFVGPAVQSAWNLSPHEESLITSVVFAGMLVGAYTWGIVSDKYGRRHV
SSI