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Cmc06g0163121 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0163121
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationCMiso1.1chr06:12326990..12328509
RNA-Seq ExpressionCmc06g0163121
SyntenyCmc06g0163121
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RDY14594.1 hypothetical protein CR513_00322, partial [Mucuna pruriens]7.5e-0730.69Show/hide
Query:  PKASSSRVMQPHRSIHELHTVRLTGIKNLIKLFNIKRCRFLQENVLLLLSSQNCPPPVKAGRQWHVDGIHTRVIENLIVASIHLDGFWQAIDSSEVQGLV
        P  S + ++ PH ++HELH +    + NL++L  IK    L+++VLLL   ++ P  V+A R+ HV G+  R++++ +V  + L    + +   E   LV
Subjt:  PKASSSRVMQPHRSIHELHTVRLTGIKNLIKLFNIKRCRFLQENVLLLLSSQNCPPPVKAGRQWHVDGIHTRVIENLIVASIHLDGFWQAIDSSEVQGLV

Query:  K
        +
Subjt:  K
TrEMBL top hitse value%identityAlignment
A0A371IHZ7 Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment)3.6e-0730.69Show/hide
Query:  PKASSSRVMQPHRSIHELHTVRLTGIKNLIKLFNIKRCRFLQENVLLLLSSQNCPPPVKAGRQWHVDGIHTRVIENLIVASIHLDGFWQAIDSSEVQGLV
        P  S + ++ PH ++HELH +    + NL++L  IK    L+++VLLL   ++ P  V+A R+ HV G+  R++++ +V  + L    + +   E   LV
Subjt:  PKASSSRVMQPHRSIHELHTVRLTGIKNLIKLFNIKRCRFLQENVLLLLSSQNCPPPVKAGRQWHVDGIHTRVIENLIVASIHLDGFWQAIDSSEVQGLV

Query:  K
        +
Subjt:  K
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTACCAGGCCAAGTCTCCCAATGCACCCAAAGCATCCAGTTCGAGGGTGATGCAGCCACATAGATCCATCCATGAACTGCACACCGTTCGACTCACAGGC
ATCAAGAATCTGATCAAGCTCTTCAACATCAAGCGCTGTAGGTTTCTCCAAGAGAATGTGCTTCTTCTTCTCAGCAGCCAAAATTGCCCACCGCCGGTGAAGGCT
GGTAGGCAGTGGCATGTAGACGGCATCCACACAAGGGTCATCGAGAATCTGATTGTAGCTTCCATACACCTTGACGGTTTCTGGCAAGCCATTGACAGCAGCGAA
GTTCAAGGCCTTGTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
TAGGAAAGAACAATGAATTGTGGCAGTTGTTTCTTTTGATGATTTGCCCCAATGAAGGGAGGCTGTGCAGGACAAGATAACACCCGCTGAGTTCTTGGTAACATC
TGGTAGTGCACGGACTTGTATTGGCAATTCGTAGTTTTTTGCCCACAAGAGTGCTCCAATGCAGTACCAGGCCAAGTCTCCCAATGCACCCAAAGCATCCAGTTC
GAGGGTGATGCAGCCACATAGATCCATCCATGAACTGCACACCGTTCGACTCACAGGCATCAAGAATCTGATCAAGCTCTTCAACATCAAGCGCTGTAGGTTTCT
CCAAGAGAATGTGCTTCTTCTTCTCAGCAGCCAAAATTGCCCACCGCCGGTGAAGGCTGGTAGGCAGTGGCATGTAGACGGCATCCACACAAGGGTCATCGAGAA
TCTGATTGTAGCTTCCATACACCTTGACGGTTTCTGGCAAGCCATTGACAGCAGCGAAGTTCAAGGCCTTGTCAAGTGATCGACTGGCAACGGCGGTGACGGCAG
AGTTGGGTGCTGAGTTTATAGCTCTGGCCACTTTTCTGGCAATCTCAGCACAGCCGACAATGCCAAATCGGATCGGGTTCTCGGCCATCTGTGGTTGCTATCGAT
GACTGAAGAGCTGGGAAAGATGTGAAGAAATGGAAGGATTATCACTATAGAAAGAAAGGAGATGGTAGTTTTATTATTTTGGGGTATGCATTCGTGGATGGTGAT
AGGCATGGTGTCTGTTTGTGATTGGTTAAGGGAAGGATAAAAGCTGATATGGCAATATGGATTTTGTATGGTTGAGATCCATGGCTTGCTCTTAACTTGATCACC
CTTCTTTGTAATTATGAGATTTAGACTTTTGCTCTCCTTTTATCAATTTGTAGCTTTGAATTCTTCTCTATAACAATAATCCCCATGAAAGTC
Protein sequenceShow/hide protein sequence
MQYQAKSPNAPKASSSRVMQPHRSIHELHTVRLTGIKNLIKLFNIKRCRFLQENVLLLLSSQNCPPPVKAGRQWHVDGIHTRVIENLIVASIHLDGFWQAIDSSE
VQGLVK