CuGenDBv2

Gene ID	Cmc06g0163201
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr06:12435211..12437550
RNA-Seq Expression	Cmc06g0163201
Synteny	Cmc06g0163201
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.14

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Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKV LQ+LLDKGFIR SVSPWGAPVLFVKKKDGSM LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKL+TAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ PLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR L EAGQAVEFSLSSDGGLLFER LCVPSDSA KT
Subjt:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKP GLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        LMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQSRQK
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

KAA0037291.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.88

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Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKV LQELLDKGFIRPSVSPWGAPVLFVKKKDGSM LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKI+AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKL+TAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIFTDHKS KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRK+SHSAALITRQ PLHRDLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSLSSDGGLLFERRLCVPS SAVKT
Subjt:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPG+TKMYQDLKRVYWWR+MKR+VAEFVSKCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ AMGTRLDFSTAFHPQTDG+TERLNQVL+DMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.66

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Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKV LQELLDKGFIRPSVSPWGAPVLFVKKKDGSM LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKL+TAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ PLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSLSSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        LMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.79

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Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKV LQELLDKGFIRP+VSPWGAPVLFVKKKDGSM LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDEDVPK
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKL+TAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ PLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSLSSDGGL FE RLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK PRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.53

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Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKV LQELLDKGFIRPSVSPWGAPVLFVKKKDGSM LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPK
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKL+TAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ PLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        LMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

97.14

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Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKV LQ+LLDKGFIR SVSPWGAPVLFVKKKDGSM LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKL+TAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ PLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR L EAGQAVEFSLSSDGGLLFER LCVPSDSA KT
Subjt:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKP GLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        LMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQSRQK
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

A0A5A7T6R9 Reverse transcriptase

0.0e+00

96.88

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Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKV LQELLDKGFIRPSVSPWGAPVLFVKKKDGSM LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKI+AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKL+TAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIFTDHKS KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRK+SHSAALITRQ PLHRDLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSLSSDGGLLFERRLCVPS SAVKT
Subjt:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPG+TKMYQDLKRVYWWR+MKR+VAEFVSKCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ AMGTRLDFSTAFHPQTDG+TERLNQVL+DMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

A0A5A7U330 Reverse transcriptase

0.0e+00

97.66

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Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKV LQELLDKGFIRPSVSPWGAPVLFVKKKDGSM LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKL+TAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ PLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSLSSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        LMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

A0A5A7UAA8 Reverse transcriptase

0.0e+00

97.79

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Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKV LQELLDKGFIRP+VSPWGAPVLFVKKKDGSM LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDEDVPK
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKL+TAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ PLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSLSSDGGL FE RLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK PRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

A0A5A7UP94 Pol protein

0.0e+00

97.53

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Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKV LQELLDKGFIRPSVSPWGAPVLFVKKKDGSM LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPK
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKL+TAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQ PLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
        LMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

4.8e-127

32.86

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Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +   + + L  G IR S +    PV+FV KK+G++ + +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ L++ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++  LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKE
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K+
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKE

P0CT35 Transposon Tf2-2 polyprotein

4.8e-127

32.86

Show/hide

Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +   + + L  G IR S +    PV+FV KK+G++ + +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ L++ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++  LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKE
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K+
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKE

P0CT36 Transposon Tf2-3 polyprotein

4.8e-127

32.86

Show/hide

Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +   + + L  G IR S +    PV+FV KK+G++ + +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ L++ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++  LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKE
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K+
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKE

P0CT37 Transposon Tf2-4 polyprotein

4.8e-127

32.86

Show/hide

Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +   + + L  G IR S +    PV+FV KK+G++ + +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ L++ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++  LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKE
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K+
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKE

P0CT41 Transposon Tf2-12 polyprotein

4.8e-127

32.86

Show/hide

Query:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +   + + L  G IR S +    PV+FV KK+G++ + +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ AP  F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ L++ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++  LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFVLKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKE
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K+
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKE

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

5.8e-27

45.04

Show/hide

Query:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLLTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLLTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACTGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTAA
GAAGAAGGACGGATCGATGCATCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTAC
AGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTAC
GAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGACAGTATTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGA
CGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGAAGCATTTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTATACGCAAAGTTCTCGAAGTGCGAGT
TTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTT
AGTGAGGTTCGTAGCTTTCTGGGTTTAGCGGGCTATTATCGACGGTTTGTGGAGAACTTCTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTT
TGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTACTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTG
ATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGCTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTA
GAGTTGGCAGCAGTGGTTTTTGTTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGTTTGAAATACTTCTTTACTCAGAA
AGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCCGATGCTCTTAGTAGGA
AGGTATCACATTCAGCAGCACTTATTACCCGACAGACCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAG
TTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGTAGAGGCAGGGCAAGCGGTTGAGTTCTC
ATTATCCTCTGATGGTGGACTTTTGTTCGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCAGTTAAGACAGAATTATTATTTGAGGCACACAGTTCCCCATTTTCCATGC
ACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCCTGGTGTGTCAGCAGGTT
AAGGCACCAAGACAGAAACCAGCGGGTTTATTACAACCCTTGAACATACCAGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAG
GGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTG
AGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGCTTGCAGACTGCTATGGGCACGAGGTTAGAT
TTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTTTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTC
CCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATCGGCATGGCACCGTTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGG
GTGAGGTAGGTGAACAGAGATTGATGGGCCCTGAGTTAGTTCAGTCTACCAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAAGAG
TTATGCAGATGTGAGGCGGAAGGATCTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAPAELKELKVLLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHY
EFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV
SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLLTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDL
ELAAVVFVLKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQTPLHRDLERAEIAVSVGAVTMQLAQ
LTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV
KAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD
FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKE
LCRCEAEGS

Cmc06g0163201 (gene) of Melon (Charmono) v1.1 genome