; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0163221 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0163221
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr06:12453627..12455138
RNA-Seq ExpressionCmc06g0163221
SyntenyCmc06g0163221
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR036397 - Ribonuclease H superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037244.1 reverse transcriptase [Cucumis melo var. makuwa]4.4e-27294.43Show/hide
Query:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL
        +DTRE+DVSLS EPVVRDYPDVFPEEL GL PHRE++FAIELEPGTVPIS+APYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD SMRL
Subjt:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL

Query:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
        CIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKI+LRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
Subjt:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF

Query:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT
        IDDILIYSKTE EHEEHLRMVLQTLRDNKLYAKF KCEFWL+QVSFLGHVVSKAGVSVDPAKIE VT W + S VSEVRSFLGLAGYYR FVENFSRIAT
Subjt:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT

Query:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY
        PLTQLTR GAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI RHY
Subjt:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY

Query:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP
        LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH+DLERAEIAV VGAVTMQL QLTVQP
Subjt:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP

Query:  TLR
        TLR
Subjt:  TLR

KAA0037248.1 pol protein [Cucumis melo var. makuwa]8.0e-290100Show/hide
Query:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL
        MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL
Subjt:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL

Query:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
        CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
Subjt:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF

Query:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT
        IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT
Subjt:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT

Query:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY
        PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY
Subjt:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY

Query:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP
        LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP
Subjt:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP

Query:  TLR
        TLR
Subjt:  TLR

KAA0040689.1 pol protein [Cucumis melo var. makuwa]2.0e-27294.43Show/hide
Query:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL
        +DTRE+DVSLSSEPVVRDYPDVFPEEL GL PHRE++FAIELEPGTVPIS+APYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKD SMRL
Subjt:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL

Query:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
        CIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKI+LRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
Subjt:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF

Query:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT
        IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWL+QVSFLGHVVSKAGVSVDP KIE VT W + S VSEVRSFLGLAGYYR FVENFSRIAT
Subjt:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT

Query:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY
        PLTQLTR GAPFVWSKACEDSFQNLKQKLVTAPVL VPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI RHY
Subjt:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY

Query:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP
        LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH+DLERAEIAV VGAVTMQL QLTVQP
Subjt:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP

Query:  TLR
        TLR
Subjt:  TLR

KAA0048687.1 pol protein [Cucumis melo var. makuwa]1.8e-27395.03Show/hide
Query:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL
        +DTRE DVSLSSEPVVRDYPDVFPEEL GL PHRE++FAIELEPGTVPIS+APYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD SMRL
Subjt:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL

Query:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
        CIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKI+LRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
Subjt:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF

Query:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT
        IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWL+QVSFLGHVVSKAGVSVDPAKIE VT W + S VSEVRSFLGLAGYYR FVENFSRIAT
Subjt:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT

Query:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY
        PLTQLTR GAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI RHY
Subjt:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY

Query:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP
        LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH+DLERAEIAV VGAVTMQL QLTVQP
Subjt:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP

Query:  TLR
        TLR
Subjt:  TLR

TYK01613.1 pol protein [Cucumis melo var. makuwa]8.9e-27394.83Show/hide
Query:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL
        +DTRE DVSLSSEPVVRDYPDVFPEEL GL PHRE++FAIELEPGTVPIS+APYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD SMRL
Subjt:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL

Query:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
        CIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKI+LRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
Subjt:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF

Query:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT
        IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWL+QVSFLGHVVSKAGVSVDPAKIE VT W + S VSEVRSFLGLAGYYR FVENFSRIAT
Subjt:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT

Query:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY
        PLTQLTR GAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI RHY
Subjt:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY

Query:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP
        LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH+DLERAEIAV VGAVTMQL QLTVQP
Subjt:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP

Query:  TLR
        TLR
Subjt:  TLR

TrEMBL top hitse value%identityAlignment
A0A5A7T190 Reverse transcriptase2.1e-27294.43Show/hide
Query:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL
        +DTRE+DVSLS EPVVRDYPDVFPEEL GL PHRE++FAIELEPGTVPIS+APYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD SMRL
Subjt:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL

Query:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
        CIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKI+LRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
Subjt:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF

Query:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT
        IDDILIYSKTE EHEEHLRMVLQTLRDNKLYAKF KCEFWL+QVSFLGHVVSKAGVSVDPAKIE VT W + S VSEVRSFLGLAGYYR FVENFSRIAT
Subjt:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT

Query:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY
        PLTQLTR GAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI RHY
Subjt:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY

Query:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP
        LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH+DLERAEIAV VGAVTMQL QLTVQP
Subjt:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP

Query:  TLR
        TLR
Subjt:  TLR

A0A5A7THE6 Reverse transcriptase9.6e-27394.43Show/hide
Query:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL
        +DTRE+DVSLSSEPVVRDYPDVFPEEL GL PHRE++FAIELEPGTVPIS+APYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKD SMRL
Subjt:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL

Query:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
        CIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKI+LRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
Subjt:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF

Query:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT
        IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWL+QVSFLGHVVSKAGVSVDP KIE VT W + S VSEVRSFLGLAGYYR FVENFSRIAT
Subjt:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT

Query:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY
        PLTQLTR GAPFVWSKACEDSFQNLKQKLVTAPVL VPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI RHY
Subjt:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY

Query:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP
        LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH+DLERAEIAV VGAVTMQL QLTVQP
Subjt:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP

Query:  TLR
        TLR
Subjt:  TLR

A0A5A7U330 Reverse transcriptase8.7e-27495.03Show/hide
Query:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL
        +DTRE DVSLSSEPVVRDYPDVFPEEL GL PHRE++FAIELEPGTVPIS+APYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD SMRL
Subjt:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL

Query:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
        CIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKI+LRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
Subjt:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF

Query:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT
        IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWL+QVSFLGHVVSKAGVSVDPAKIE VT W + S VSEVRSFLGLAGYYR FVENFSRIAT
Subjt:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT

Query:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY
        PLTQLTR GAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI RHY
Subjt:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY

Query:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP
        LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH+DLERAEIAV VGAVTMQL QLTVQP
Subjt:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP

Query:  TLR
        TLR
Subjt:  TLR

A0A5D3BPI1 Reverse transcriptase4.3e-27394.83Show/hide
Query:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL
        +DTRE DVSLSSEPVVRDYPDVFPEEL GL PHRE++FAIELEPGTVPIS+APYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD SMRL
Subjt:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL

Query:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
        CIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKI+LRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
Subjt:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF

Query:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT
        IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWL+QVSFLGHVVSKAGVSVDPAKIE VT W + S VSEVRSFLGLAGYYR FVENFSRIAT
Subjt:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT

Query:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY
        PLTQLTR GAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI RHY
Subjt:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY

Query:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP
        LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH+DLERAEIAV VGAVTMQL QLTVQP
Subjt:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP

Query:  TLR
        TLR
Subjt:  TLR

A0A5D3C6J4 Reverse transcriptase3.9e-290100Show/hide
Query:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL
        MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL
Subjt:  MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRL

Query:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
        CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF
Subjt:  CIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVF

Query:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT
        IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT
Subjt:  IDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIAT

Query:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY
        PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY
Subjt:  PLTQLTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHY

Query:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP
        LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP
Subjt:  LYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQP

Query:  TLR
        TLR
Subjt:  TLR

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.69.1e-8739.17Show/hide
Query:  YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDES-----MRLCIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRI
        Y    A  +E++ Q+Q++L++G IR S SP+ +P+  V KK ++      R+ IDYR+LN++TV +R+P+P +D++  +L     F+ I+L  G+HQ+ +
Subjt:  YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDES-----MRLCIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRI

Query:  KDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLG
            V KTAF +++GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+++S +  EH + L +V + L    L  +  KCEF  ++ +FLG
Subjt:  KDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLG

Query:  HVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIATPLTQ-LTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIY
        HV++  G+  +P KIE +  +P  ++  E+++FLGL GYYR F+ NF+ IA P+T+ L +N      +   + +F+ LK  +   P+L VPD +  F + 
Subjt:  HVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIATPLTQ-LTRNGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIY

Query:  SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG
        +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A+V+A K  RHYL G   +I +DH+ L + +  K+ N +  RW   + ++D +I Y  G
Subjt:  SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG

Query:  KANVVADALSR
        K N VADALSR
Subjt:  KANVVADALSR

P0CT41 Transposon Tf2-12 polyprotein7.0e-7935Show/hide
Query:  VVRDYPDVFPEELLGLLPH--REIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRLCIDYRELNKVTV
        + +++ D+  E     LP   + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+ ++R+ +DY+ LNK   
Subjt:  VVRDYPDVFPEELLGLLPH--REIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRLCIDYRELNKVTV

Query:  KNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA
         N YPLP+I+ L  ++QG+T+F+K++L+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+
Subjt:  KNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA

Query:  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRNGAPF
        EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W Q     E+R FLG   Y R F+   S++  PL  L +    +
Subjt:  EHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRNGAPF

Query:  VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHYLYG--EK
         W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK  RHYL    E 
Subjt:  VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHYLYG--EK

Query:  IQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS
         +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR V  +
Subjt:  IQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS

P10401 Retrovirus-related Pol polyprotein from transposon gypsy1.8e-7938.11Show/hide
Query:  QLQELLDKGFIRPSVSPWGAPVLFVKKK------DESMRLCIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRS
        ++++LL  G IRPS SP+ +P   V KK      + + RL ID+R+LN+ T+ +RYP+P I  +   L  A  F+ ++L+SGYHQ+ + + D +KT+F  
Subjt:  QLQELLDKGFIRPSVSPWGAPVLFVKKK------DESMRLCIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRS

Query:  RYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDP
          G YEF  + FGL NA ++F   ++ V RE +     V++DD++I+S+ E++H  H+  VL+ L D  +     K  F+   V +LG +VSK G   DP
Subjt:  RYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDP

Query:  AKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTR--NGA---------PFVWSKACEDSFQNLKQKLVTAPV-LTVPDGSGSFVIYS
         K++ +  +P+   V +VRSFLGLA YYR F+++F+ IA P+T + +  NG+         P  +++   ++FQ L+  L +  V L  PD    F + +
Subjt:  AKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTR--NGA---------PFVWSKACEDSFQNLKQKLVTAPV-LTVPDGSGSFVIYS

Query:  DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHYLYGEK-IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG
        DAS  G+G VL Q+G+ +   SR LK  EQNY T++ EL A+V+AL  L+++LYG + I IFTDH+ L +    +  N + +RW   +  ++ ++ Y PG
Subjt:  DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHYLYGEK-IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG

Query:  KANVVADALSRK
        K N VADALSR+
Subjt:  KANVVADALSRK

P20825 Retrovirus-related Pol polyprotein from transposon 2972.0e-8638.37Show/hide
Query:  PISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDES-----MRLCIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSG
        PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK ++      R+ IDYR+LN++T+ +RYP+P +D++  +L     F+ I+L  G
Subjt:  PISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDES-----MRLCIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSG

Query:  YHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLR
        +HQ+ + +  + KTAF ++ GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+I+S +  EH   +++V   L D  L  +  KCEF  +
Subjt:  YHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLR

Query:  QVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRNGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGS
        + +FLGH+V+  G+  +P K++ + S+P  ++  E+R+FLGL GYYR F+ N++ IA P+T   +        K    ++F+ LK  ++  P+L +PD  
Subjt:  QVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRNGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGS

Query:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
          FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K  RHYL G +  I +DH+ L++    KE   +  RW   + +Y  +
Subjt:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE

Query:  ILYHPGKANVVADALSR
        I Y  GK N VADALSR
Subjt:  ILYHPGKANVVADALSR

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus2.7e-8335.42Show/hide
Query:  TREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGT---VPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----
        T+EI  SL  E     +P +F   L G+     ++ A++ E  T    PI    Y        E++ Q+ ELL  G IRPS SP+ +P+  V KK     
Subjt:  TREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGT---VPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----

Query:  DESMRLCIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD
        ++  R+ +D++ LN VT+ + YP+P I+     L  A  F+ ++L SG+HQ+ +K+ D+ KTAF +  G YEF+ + FGL NAPA+F  +++ + RE + 
Subjt:  DESMRLCIDYRELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD

Query:  TFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVEN
            V+IDDI+++S+    H ++LR+VL +L    L     K  F   QV FLG++V+  G+  DP K+  ++  P  + V E++ FLG+  YYR F+++
Subjt:  TFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVEN

Query:  FSRIATPLTQLTR-----------NGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQN
        ++++A PLT LTR           +  P    +    SF +LK  L ++ +L  P  +  F + +DAS   +G VL Q    + + +AY SR L   E+N
Subjt:  FSRIATPLTQLTR-----------NGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKILRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
        Y T + E+ A++++L  LR YLYG   I+++TDH+ L +    +  N + +RW   +++Y+CE++Y PGK+NVVADALSR
Subjt:  YPTHDLELAAVVFALKILRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein2.0e-2542.75Show/hide
Query:  HLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLG--HVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRNGAPFVW
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+E +  WP+    +E+R FLGL GYYR FV+N+ +I  PLT+L +  +   W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLG--HVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRNGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACTAGAGAGATTGATGTATCCCTGTCATCAGAACCAGTAGTAAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCTAGGGTTACTTCCTCACAGAGAG
ATTCAGTTTGCCATAGAGCTGGAGCCGGGCACGGTTCCTATATCCAAAGCCCCATACAGGATGGCCCCAGCAGAATTGAAAGAGCTGAAAGTGCAGCTACAGGAG
TTGCTTGATAAAGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGAATCGATGCGCCTATGCATTGACTATAGG
GAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCATAATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTTTCTAAGATTAATCTTCGA
TCAGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACAGAAGACAGCCTTTCGTTCCAGATACGGACACTATGAGTTTATTGTAATGTCTTTTGGTTTGACG
AATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATTGTGTTTATTGATGATATTTTGATATATTCCAAGACA
GAGGCCGAGCATGAGGAGCATTTACGTATGGTTCTACAAACCCTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAGTGTGAGTTTTGGTTGAGGCAAGTATCC
TTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGTCGTTACCAGTTGGCCCCAACTTTCCAGAGTCAGTGAGGTTCGTAGC
TTTCTGGGTTTAGCAGGTTATTATCGATGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAATGGAGCTCCTTTTGTTTGGAGC
AAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGTTCAGGTAGTTTTGTGATTTACAGCGATGCT
TCTAAGAAGGGTTTGGGTTGTGTCTTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACATGATTTA
GAGTTGGCAGCAGTGGTTTTTGCACTGAAGATATTGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACAGATCATAAGAGCTTGAAATACTTCTTTACT
CAGAAGGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCT
CTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCAAGATCTTGAGAGAGCTGAGATTGCAGTGCCAGTAGGGGCAGTCACT
ATGCAGTTAGTCCAGTTAACGGTACAGCCGACTTTGAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATACTAGAGAGATTGATGTATCCCTGTCATCAGAACCAGTAGTAAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCTAGGGTTACTTCCTCACAGAGAG
ATTCAGTTTGCCATAGAGCTGGAGCCGGGCACGGTTCCTATATCCAAAGCCCCATACAGGATGGCCCCAGCAGAATTGAAAGAGCTGAAAGTGCAGCTACAGGAG
TTGCTTGATAAAGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGAATCGATGCGCCTATGCATTGACTATAGG
GAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCATAATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTTTCTAAGATTAATCTTCGA
TCAGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACAGAAGACAGCCTTTCGTTCCAGATACGGACACTATGAGTTTATTGTAATGTCTTTTGGTTTGACG
AATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATTGTGTTTATTGATGATATTTTGATATATTCCAAGACA
GAGGCCGAGCATGAGGAGCATTTACGTATGGTTCTACAAACCCTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAGTGTGAGTTTTGGTTGAGGCAAGTATCC
TTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGTCGTTACCAGTTGGCCCCAACTTTCCAGAGTCAGTGAGGTTCGTAGC
TTTCTGGGTTTAGCAGGTTATTATCGATGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAATGGAGCTCCTTTTGTTTGGAGC
AAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGTTCAGGTAGTTTTGTGATTTACAGCGATGCT
TCTAAGAAGGGTTTGGGTTGTGTCTTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACATGATTTA
GAGTTGGCAGCAGTGGTTTTTGCACTGAAGATATTGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACAGATCATAAGAGCTTGAAATACTTCTTTACT
CAGAAGGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCT
CTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCAAGATCTTGAGAGAGCTGAGATTGCAGTGCCAGTAGGGGCAGTCACT
ATGCAGTTAGTCCAGTTAACGGTACAGCCGACTTTGAGGTAG
Protein sequenceShow/hide protein sequence
MDTREIDVSLSSEPVVRDYPDVFPEELLGLLPHREIQFAIELEPGTVPISKAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRLCIDYR
ELNKVTVKNRYPLPIIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVQKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT
EAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQVSFLGHVVSKAGVSVDPAKIEVVTSWPQLSRVSEVRSFLGLAGYYRWFVENFSRIATPLTQLTRNGAPFVWS
KACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKILRHYLYGEKIQIFTDHKSLKYFFT
QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVPVGAVTMQLVQLTVQPTLR