| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037569.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-46 | 86.61 | Show/hide |
Query: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
MNVKARGGYK+FI+F D+YSRY HVYLIQNKS FEKFK+YK E+ENESGKTIKT RSDRGGEYMDLRFQDYLI+HGIQSQLSAP+TPQQN VSE+RNQT
Subjt: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
Query: LLDMVRSMMSFA
LLDMVRSMMSFA
Subjt: LLDMVRSMMSFA
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| KAA0038017.1 gag/pol protein [Cucumis melo var. makuwa] | 2.2e-46 | 86.61 | Show/hide |
Query: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
MNVKAR GY+YFISF D+YSRYGHVYLIQNKS+SFEKFK+YK ++ENESGKTIKT RSDRGGEYMDLRFQDYLIEHGIQSQLSAP+TPQQN V E+RN+T
Subjt: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
Query: LLDMVRSMMSFA
LLDMVRSMMSFA
Subjt: LLDMVRSMMSFA
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| KAA0040307.1 gag/pol protein [Cucumis melo var. makuwa] | 2.6e-47 | 87.5 | Show/hide |
Query: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
MNVKARGGY+YFI+F D+YSRYGHVYLIQNKS+SFEKFK+YK E+ENESGK IKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAP+TPQ N VSE+RN+T
Subjt: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
Query: LLDMVRSMMSFA
LLDMVRSMMSFA
Subjt: LLDMVRSMMSFA
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| KAA0054875.1 gag/pol protein [Cucumis melo var. makuwa] | 2.6e-47 | 88.29 | Show/hide |
Query: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
MNVKARGGY+YFISF D+Y+RYGHVYLIQNKS+SFEKFK+YK E+ENESGKTIKT RSDRGGEYMDLRFQDYLIEH IQSQLSAP+TPQQN VSE+RNQT
Subjt: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
Query: LLDMVRSMMSF
LLDMVRSMMSF
Subjt: LLDMVRSMMSF
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| KAA0062998.1 putative retrotransposon protein [Cucumis melo var. makuwa] | 9.8e-47 | 86.61 | Show/hide |
Query: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
MN KARGGY+YFISF D+YSRYGHVYLIQNKS+SFEKFK+YK E+ENESGKTIKTLRSDRGGEYMDLRFQDYLI+HGI SQLSA +TPQQN VSE+RN+T
Subjt: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
Query: LLDMVRSMMSFA
LLDMVRSMMSFA
Subjt: LLDMVRSMMSFA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T8E8 Gag/pol protein | 6.2e-47 | 86.61 | Show/hide |
Query: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
MNVKARGGYK+FI+F D+YSRY HVYLIQNKS FEKFK+YK E+ENESGKTIKT RSDRGGEYMDLRFQDYLI+HGIQSQLSAP+TPQQN VSE+RNQT
Subjt: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
Query: LLDMVRSMMSFA
LLDMVRSMMSFA
Subjt: LLDMVRSMMSFA
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| A0A5A7TFI0 Gag/pol protein | 1.2e-47 | 87.5 | Show/hide |
Query: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
MNVKARGGY+YFI+F D+YSRYGHVYLIQNKS+SFEKFK+YK E+ENESGK IKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAP+TPQ N VSE+RN+T
Subjt: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
Query: LLDMVRSMMSFA
LLDMVRSMMSFA
Subjt: LLDMVRSMMSFA
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| A0A5A7UMM9 Gag/pol protein | 1.2e-47 | 88.29 | Show/hide |
Query: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
MNVKARGGY+YFISF D+Y+RYGHVYLIQNKS+SFEKFK+YK E+ENESGKTIKT RSDRGGEYMDLRFQDYLIEH IQSQLSAP+TPQQN VSE+RNQT
Subjt: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
Query: LLDMVRSMMSF
LLDMVRSMMSF
Subjt: LLDMVRSMMSF
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| A0A5A7V5V2 Putative retrotransposon protein | 4.7e-47 | 86.61 | Show/hide |
Query: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
MN KARGGY+YFISF D+YSRYGHVYLIQNKS+SFEKFK+YK E+ENESGKTIKTLRSDRGGEYMDLRFQDYLI+HGI SQLSA +TPQQN VSE+RN+T
Subjt: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
Query: LLDMVRSMMSFA
LLDMVRSMMSFA
Subjt: LLDMVRSMMSFA
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| A0A5D3BTT1 Gag/pol protein | 1.1e-46 | 86.61 | Show/hide |
Query: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
MNVKAR GY+YFISF D+YSRYGHVYLIQNKS+SFEKFK+YK ++ENESGKTIKT RSDRGGEYMDLRFQDYLIEHGIQSQLSAP+TPQQN V E+RN+T
Subjt: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
Query: LLDMVRSMMSFA
LLDMVRSMMSFA
Subjt: LLDMVRSMMSFA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.7e-09 | 33.33 | Show/hide |
Query: YFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQTLLDMVRSMMS
YF+ F D+++ Y YLI+ KS+ F F+ + + E + L D G EY+ + + ++ GI L+ P+TPQ N VSE+ +T+ + R+M+S
Subjt: YFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQTLLDMVRSMMS
Query: FA
A
Subjt: FA
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.3e-21 | 41.96 | Show/hide |
Query: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
M +++ GG KYF++F D+ SR VY+++ K F+ F+K+ +E E+G+ +K LRSD GGEY F++Y HGI+ + + P TPQ N V+E+ N+T
Subjt: MNVKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQT
Query: LLDMVRSMMSFA
+++ VRSM+ A
Subjt: LLDMVRSMMSFA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.9e-11 | 32.73 | Show/hide |
Query: VKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQTLL
+ + Y+Y++ F D ++RY +Y ++ KS E F +K LEN I T SD GGE++ L +Y +HGI S P+TP+ N +SE++++ ++
Subjt: VKARGGYKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQTLL
Query: DMVRSMMSFA
+ +++S A
Subjt: DMVRSMMSFA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.8e-12 | 37.5 | Show/hide |
Query: YKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQTLLDMVRSM
Y+Y++ F D ++RY +Y ++ KS + F +K +EN I TL SD GGE++ LR DYL +HGI S P+TP+ N +SE++++ +++M ++
Subjt: YKYFISFTDEYSRYGHVYLIQNKSNSFEKFKKYKGELENESGKTIKTLRSDRGGEYMDLRFQDYLIEHGIQSQLSAPNTPQQNDVSEKRNQTLLDMVRSM
Query: MSFA
+S A
Subjt: MSFA
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