; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0163361 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0163361
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr06:12886967..12888507
RNA-Seq ExpressionCmc06g0163361
SyntenyCmc06g0163361
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADJ18449.1 gag/pol protein, partial [Bryonia dioica]4.8e-20475.68Show/hide
Query:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE
        MNDVDRDQWIK M+LEMESM+FNS WTLVD P+D KPIGCKWIYKRK +QAGKVQTFKARLVAKGYTQ+EGVD+EET S V+MLKSIRILLSIATFY+YE
Subjt:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE

Query:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKV-------------------------------------------INSIVAFLVLYVDDILLIGND
        I QMDVKT  LN NLEESIYM Q EGFI   QEQKV                                           +NS+VAFL+LYVDDILLIGND
Subjt:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKV-------------------------------------------INSIVAFLVLYVDDILLIGND

Query:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL
        V YLT++KKWL TQFQM DLG+AQ+ LGIQIV NRKNKT+AMSQASYIDK+LSRYKMQNSKKG +P+++GI LSKEQCPKTPQEVEDMR + Y+S VGSL
Subjt:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL

Query:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS
        MYAMLCTRPDICYS+G+VS+YQSN  RDHW A KNILKYLRRT++YMLVYG KDLILTGYTDSDFQ++KD R STSGSVFTLNGG VVWRSVKQTCIA+S
Subjt:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS

Query:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQ
        TME EYV  CEAAKEAVWLRKFLTDLE+VPNMHLPITLYCDNSGA+ANS+EPRSHKR KHIE KYHLIR+IVHRGDVVVTQ
Subjt:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQ

KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-20672.02Show/hide
Query:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE
        MNDVD+DQW+K MDLEMESM+FNS W LVD P   KPIGCKWIYKRK + AGKVQTFKARLVAKGYTQREGVD+EET S V+MLKSIRILLSIATFYDYE
Subjt:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE

Query:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI-------------------------------------------NSIVAFLVLYVDDILLIGND
        I QMDVKT  LN NLEESI+M+Q EGFI  GQEQKV                                               VAFLVLYVDDILLIGND
Subjt:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI-------------------------------------------NSIVAFLVLYVDDILLIGND

Query:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL
        VGYLT++K WLA QFQM DLG+AQ+ LGIQI+ +RKNKT+A+SQA+YIDK+L RY MQNSKKGL+P+++G+ LSKEQ PKTPQEVEDMR++ YAS VGSL
Subjt:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL

Query:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS
        MYAMLCTRPDICY++G+VS+YQSN   DHW A K +LKYLRRT+DYMLVYG KDLILTGYTDSDFQT+KD R STSGSVFTLNGG VVWRS+KQ CIA+S
Subjt:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS

Query:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKV
        TME EYV  CEAAKEAVWLRKFL DLE+VPNM+LPITLYCDNSGA+ANS+EPRSHKR KHIE KYHLIR+IV RGDV+VT+I+SE  I DPFTK L AKV
Subjt:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKV

Query:  FEGHLQNLGLR
        FEGHL++LGLR
Subjt:  FEGHLQNLGLR

KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]4.1e-20370.84Show/hide
Query:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE
        MNDVD+DQW+K MDLEMESM+FNS W LVD P   KPIGCKWIYKRK + AGKVQTFKARLVAKGYT++EGVD+EET S V+MLKSIRILLSIA FYDYE
Subjt:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE

Query:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI-------------------------------------------NSIVAFLVLYVDDILLIGND
        I QMDVKT  LN NLEESI+M+Q EGFI  GQEQKV                                               VAFLVLYVDDILLIGND
Subjt:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI-------------------------------------------NSIVAFLVLYVDDILLIGND

Query:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL
        VGYLT++K WLA QFQM DLG+ Q+ LGIQI+ +RKNKT+A+SQA+YIDK+L RY MQNSKKGL+P+++G+ LSKEQ PKTPQEVEDMR++ YAS VGSL
Subjt:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL

Query:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS
        MYAMLCTRPDICY++G+VS+YQSN   DHW A K ILKYLRRT+DYMLVYG KDLILTGYT+SDFQT+KD R STS SVFTLNGG VVWRS+KQ CIA+S
Subjt:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS

Query:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKV
        TME EYV  CEAAKEAVWL+KFL DLE+VPNM+LPITLYCDNSGA+ANS+EPRSHKR KHIE KYHLIR+IV RGDV+VT+I+SE  I DPFTK L AKV
Subjt:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKV

Query:  FEGHLQNLGLR
        FEGHL++LGLR
Subjt:  FEGHLQNLGLR

KAA0047406.1 gag/pol protein [Cucumis melo var. makuwa]5.9e-271100Show/hide
Query:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE
        MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE
Subjt:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE

Query:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVINSIVAFLVLYVDDILLIGNDVGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMS
        IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVINSIVAFLVLYVDDILLIGNDVGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMS
Subjt:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVINSIVAFLVLYVDDILLIGNDVGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMS

Query:  QASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRT
        QASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRT
Subjt:  QASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRT

Query:  KDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNS
        KDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNS
Subjt:  KDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNS

Query:  GALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKVFEGHLQNLGLRYL
        GALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKVFEGHLQNLGLRYL
Subjt:  GALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKVFEGHLQNLGLRYL

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-20672.02Show/hide
Query:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE
        MNDVD+DQW+K MDLEMESM+FNS W LVD P   KPIGCKWIYKRK + AGKVQTFKARLVAKGYTQREGVD+EET S V+MLKSIRILLSIATFYDYE
Subjt:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE

Query:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI-------------------------------------------NSIVAFLVLYVDDILLIGND
        I QMDVKT  LN NLEESI+M+Q EGFI  GQEQKV                                               VAFLVLYVDDILLIGND
Subjt:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI-------------------------------------------NSIVAFLVLYVDDILLIGND

Query:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL
        VGYLT++K WLA QFQM DLG+AQ+ LGIQI+ +RKNKT+A+SQA+YIDK+L RY MQNSKKGL+P+++G+ LSKEQ PKTPQEVEDMR++ YAS VGSL
Subjt:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL

Query:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS
        MYAMLCTRPDICY++G+VS+YQSN   DHW A K +LKYLRRT+DYMLVYG KDLILTGYTDSDFQT+KD R STSGSVFTLNGG VVWRS+KQ CIA+S
Subjt:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS

Query:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKV
        TME EYV  CEAAKEAVWLRKFL DLE+VPNM+LPITLYCDNSGA+ANS+EPRSHKR KHIE KYHLIR+IV RGDV+VT+I+SE  I DPFTK L AKV
Subjt:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKV

Query:  FEGHLQNLGLR
        FEGHL++LGLR
Subjt:  FEGHLQNLGLR

TrEMBL top hitse value%identityAlignment
A0A5A7T2V9 Gag/pol protein2.0e-20370.84Show/hide
Query:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE
        MNDVD+DQW+K MDLEMESM+FNS W LVD P   KPIGCKWIYKRK + AGKVQTFKARLVAKGYT++EGVD+EET S V+MLKSIRILLSIA FYDYE
Subjt:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE

Query:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI-------------------------------------------NSIVAFLVLYVDDILLIGND
        I QMDVKT  LN NLEESI+M+Q EGFI  GQEQKV                                               VAFLVLYVDDILLIGND
Subjt:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI-------------------------------------------NSIVAFLVLYVDDILLIGND

Query:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL
        VGYLT++K WLA QFQM DLG+ Q+ LGIQI+ +RKNKT+A+SQA+YIDK+L RY MQNSKKGL+P+++G+ LSKEQ PKTPQEVEDMR++ YAS VGSL
Subjt:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL

Query:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS
        MYAMLCTRPDICY++G+VS+YQSN   DHW A K ILKYLRRT+DYMLVYG KDLILTGYT+SDFQT+KD R STS SVFTLNGG VVWRS+KQ CIA+S
Subjt:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS

Query:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKV
        TME EYV  CEAAKEAVWL+KFL DLE+VPNM+LPITLYCDNSGA+ANS+EPRSHKR KHIE KYHLIR+IV RGDV+VT+I+SE  I DPFTK L AKV
Subjt:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKV

Query:  FEGHLQNLGLR
        FEGHL++LGLR
Subjt:  FEGHLQNLGLR

A0A5A7TZD0 Gag/pol protein5.0e-20772.02Show/hide
Query:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE
        MNDVD+DQW+K MDLEMESM+FNS W LVD P   KPIGCKWIYKRK + AGKVQTFKARLVAKGYTQREGVD+EET S V+MLKSIRILLSIATFYDYE
Subjt:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE

Query:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI-------------------------------------------NSIVAFLVLYVDDILLIGND
        I QMDVKT  LN NLEESI+M+Q EGFI  GQEQKV                                               VAFLVLYVDDILLIGND
Subjt:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI-------------------------------------------NSIVAFLVLYVDDILLIGND

Query:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL
        VGYLT++K WLA QFQM DLG+AQ+ LGIQI+ +RKNKT+A+SQA+YIDK+L RY MQNSKKGL+P+++G+ LSKEQ PKTPQEVEDMR++ YAS VGSL
Subjt:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL

Query:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS
        MYAMLCTRPDICY++G+VS+YQSN   DHW A K +LKYLRRT+DYMLVYG KDLILTGYTDSDFQT+KD R STSGSVFTLNGG VVWRS+KQ CIA+S
Subjt:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS

Query:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKV
        TME EYV  CEAAKEAVWLRKFL DLE+VPNM+LPITLYCDNSGA+ANS+EPRSHKR KHIE KYHLIR+IV RGDV+VT+I+SE  I DPFTK L AKV
Subjt:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKV

Query:  FEGHLQNLGLR
        FEGHL++LGLR
Subjt:  FEGHLQNLGLR

A0A5A7UYE8 Gag/pol protein5.0e-20772.02Show/hide
Query:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE
        MNDVD+DQW+K MDLEMESM+FNS W LVD P   KPIGCKWIYKRK + AGKVQTFKARLVAKGYTQREGVD+EET S V+MLKSIRILLSIATFYDYE
Subjt:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE

Query:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI-------------------------------------------NSIVAFLVLYVDDILLIGND
        I QMDVKT  LN NLEESI+M+Q EGFI  GQEQKV                                               VAFLVLYVDDILLIGND
Subjt:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI-------------------------------------------NSIVAFLVLYVDDILLIGND

Query:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL
        VGYLT++K WLA QFQM DLG+AQ+ LGIQI+ +RKNKT+A+SQA+YIDK+L RY MQNSKKGL+P+++G+ LSKEQ PKTPQEVEDMR++ YAS VGSL
Subjt:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL

Query:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS
        MYAMLCTRPDICY++G+VS+YQSN   DHW A K +LKYLRRT+DYMLVYG KDLILTGYTDSDFQT+KD R STSGSVFTLNGG VVWRS+KQ CIA+S
Subjt:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS

Query:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKV
        TME EYV  CEAAKEAVWLRKFL DLE+VPNM+LPITLYCDNSGA+ANS+EPRSHKR KHIE KYHLIR+IV RGDV+VT+I+SE  I DPFTK L AKV
Subjt:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKV

Query:  FEGHLQNLGLR
        FEGHL++LGLR
Subjt:  FEGHLQNLGLR

A0A5D3CQK8 Gag/pol protein2.9e-271100Show/hide
Query:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE
        MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE
Subjt:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE

Query:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVINSIVAFLVLYVDDILLIGNDVGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMS
        IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVINSIVAFLVLYVDDILLIGNDVGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMS
Subjt:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKVINSIVAFLVLYVDDILLIGNDVGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMS

Query:  QASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRT
        QASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRT
Subjt:  QASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRT

Query:  KDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNS
        KDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNS
Subjt:  KDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNS

Query:  GALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKVFEGHLQNLGLRYL
        GALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKVFEGHLQNLGLRYL
Subjt:  GALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKVFEGHLQNLGLRYL

E2GK51 Gag/pol protein (Fragment)2.3e-20475.68Show/hide
Query:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE
        MNDVDRDQWIK M+LEMESM+FNS WTLVD P+D KPIGCKWIYKRK +QAGKVQTFKARLVAKGYTQ+EGVD+EET S V+MLKSIRILLSIATFY+YE
Subjt:  MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYE

Query:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKV-------------------------------------------INSIVAFLVLYVDDILLIGND
        I QMDVKT  LN NLEESIYM Q EGFI   QEQKV                                           +NS+VAFL+LYVDDILLIGND
Subjt:  IQQMDVKTTCLNRNLEESIYMAQLEGFIENGQEQKV-------------------------------------------INSIVAFLVLYVDDILLIGND

Query:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL
        V YLT++KKWL TQFQM DLG+AQ+ LGIQIV NRKNKT+AMSQASYIDK+LSRYKMQNSKKG +P+++GI LSKEQCPKTPQEVEDMR + Y+S VGSL
Subjt:  VGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL

Query:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS
        MYAMLCTRPDICYS+G+VS+YQSN  RDHW A KNILKYLRRT++YMLVYG KDLILTGYTDSDFQ++KD R STSGSVFTLNGG VVWRSVKQTCIA+S
Subjt:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANS

Query:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQ
        TME EYV  CEAAKEAVWLRKFLTDLE+VPNMHLPITLYCDNSGA+ANS+EPRSHKR KHIE KYHLIR+IVHRGDVVVTQ
Subjt:  TMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQ

SwissProt top hitse value%identityAlignment
P04146 Copia protein7.2e-7031.65Show/hide
Query:  DRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYEIQQM
        D+  W + ++ E+ +   N+ WT+  +P ++  +  +W++  K N+ G    +KARLVA+G+TQ+  +D+EET + V+ + S R +LS+   Y+ ++ QM
Subjt:  DRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYEIQQM

Query:  DVKTTCLNRNLEESIYMAQLEGFIENG----------------------------QEQKVINSIV---------------AFLVLYVDDILLIGNDVGYL
        DVKT  LN  L+E IYM   +G   N                             +E + +NS V                +++LYVDD+++   D+  +
Subjt:  DVKTTCLNRNLEESIYMAQLEGFIENG----------------------------QEQKVINSIV---------------AFLVLYVDDILLIGNDVGYL

Query:  TEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVP----YKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL
           K++L  +F+M DL + + F+GI+I    +   I +SQ++Y+ K+LS++ M+N      P      Y +L S E C  TP            S++G L
Subjt:  TEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVP----YKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSL

Query:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLI----LTGYTDSDFQTEKDVRGSTSGSVFTL-NGGVVVWRSVKQT
        MY MLCTRPD+  ++ ++S+Y S    + W   K +L+YL+ T D  L++  K+L     + GY DSD+   +  R ST+G +F + +  ++ W + +Q 
Subjt:  MYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLI----LTGYTDSDFQTEKDVRGSTSGSVFTL-NGGVVVWRSVKQT

Query:  CIANSTMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKA
         +A S+ E EY+   EA +EA+WL+  LT + I   +  PI +Y DN G ++ +  P  HKR KHI+ KYH  R+ V    + +  I +E ++ D FTK 
Subjt:  CIANSTMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKA

Query:  LKAKVFEGHLQNLGL
        L A  F      LGL
Subjt:  LKAKVFEGHLQNLGL

P0CV72 Secreted RxLR effector protein 1615.4e-2545.19Show/hide
Query:  MRKVSYASVVGSLMYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVY---GTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNG
        M+ V Y S VG++MY M+ TRPD+  ++G++S++ S+    HW A K +L+YL+ T+ Y L +   GT  L+  GY+D+D+  + + R STSG +F LNG
Subjt:  MRKVSYASVVGSLMYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVY---GTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNG

Query:  GVVVWRSVKQTCIANSTMEVEYVTTCEAAKEAVWL
        G V WRS KQ  +A S+ E EY+   EA +EAVWL
Subjt:  GVVVWRSVKQTCIANSTMEVEYVTTCEAAKEAVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-9338.2Show/hide
Query:  DRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYEIQQM
        +++Q +K M  EMES+  N  + LV+ P  ++P+ CKW++K K +   K+  +KARLV KG+ Q++G+D +E  S V  + SIR +LS+A   D E++Q+
Subjt:  DRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYEIQQM

Query:  DVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI---------------------------------------------NSIVAFLVLYVDDILLIGNDVG
        DVKT  L+ +LEE IYM Q EGF   G++  V                                              N+ +  L+LYVDD+L++G D G
Subjt:  DVKTTCLNRNLEESIYMAQLEGFIENGQEQKVI---------------------------------------------NSIVAFLVLYVDDILLIGNDVG

Query:  YLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMY
         + ++K  L+  F M DLG AQ  LG++IV  R ++ + +SQ  YI+++L R+ M+N+K    P    + LSK+ CP T +E  +M KV Y+S VGSLMY
Subjt:  YLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMY

Query:  AMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTM
        AM+CTRPDI +++G+VS++  N  ++HW A K IL+YLR T    L +G  D IL GYTD+D   + D R S++G +FT +GG + W+S  Q C+A ST 
Subjt:  AMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTM

Query:  EVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKVFE
        E EY+   E  KE +WL++FL +L +    ++   +YCD+  A+  S+    H R KHI+ +YH IR++V    + V +IS+ +   D  TK +    FE
Subjt:  EVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKVFE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.7e-5931.23Show/hide
Query:  DQWIKTMDLEMESMFFNSFWTLVDQPNDRKPI-GCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYEIQQMD
        ++W   M  E+ +   N  W LV  P     I GC+WI+ +K N  G +  +KARLVAKGY QR G+D+ ET S V    SIRI+L +A    + I+Q+D
Subjt:  DQWIKTMDLEMESMFFNSFWTLVDQPNDRKPI-GCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYEIQQMD

Query:  VKTTCLNRNLEESIYMAQLEGFIENGQEQKV------------------------------INSI-------------VAFLVLYVDDILLIGNDVGYLT
        V    L   L + +YM+Q  GFI+  +   V                              +NS+             + ++++YVDDIL+ GND   L 
Subjt:  VKTTCLNRNLEESIYMAQLEGFIENGQEQKV------------------------------INSI-------------VAFLVLYVDDILLIGNDVGYLT

Query:  EIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMYAML
             L+ +F + D  +  +FLGI+    R    + +SQ  YI  +L+R  M  +K    P      LS     K     E      Y  +VGSL Y + 
Subjt:  EIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMYAML

Query:  CTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDY-MLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTMEV
         TRPDI Y++  +S++      +H  A K IL+YL  T ++ + +     L L  Y+D+D+  +KD   ST+G +  L    + W S KQ  +  S+ E 
Subjt:  CTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDY-MLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTMEV

Query:  EYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKVFEGH
        EY +    + E  W+   LT+L I   +  P  +YCDN GA      P  H R KHI   YH IR  V  G + V  +S+  ++ D  TK L    F+  
Subjt:  EYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKVFEGH

Query:  LQNLGL
           +G+
Subjt:  LQNLGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.6e-6231.42Show/hide
Query:  DQWIKTMDLEMESMFFNSFWTLVDQPNDRKPI-GCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYEIQQMD
        D+W + M  E+ +   N  W LV  P     I GC+WI+ +K N  G +  +KARLVAKGY QR G+D+ ET S V    SIRI+L +A    + I+Q+D
Subjt:  DQWIKTMDLEMESMFFNSFWTLVDQPNDRKPI-GCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYEIQQMD

Query:  VKTTCLNRNLEESIYMAQLEGFIENGQEQKV------------------------------INSI-------------VAFLVLYVDDILLIGNDVGYLT
        V    L   L + +YM+Q  GF++  +   V                              +NSI             + ++++YVDDIL+ GND   L 
Subjt:  VKTTCLNRNLEESIYMAQLEGFIENGQEQKV------------------------------INSI-------------VAFLVLYVDDILLIGNDVGYLT

Query:  EIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMYAML
             L+ +F + +  D  +FLGI+    R  + + +SQ  Y   +L+R  M  +K    P      L+     K P   E      Y  +VGSL Y + 
Subjt:  EIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMYAML

Query:  CTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDY-MLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTMEV
         TRPD+ Y++  +S+Y      DHW A K +L+YL  T D+ + +     L L  Y+D+D+  + D   ST+G +  L    + W S KQ  +  S+ E 
Subjt:  CTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDY-MLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTMEV

Query:  EYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKVFEGH
        EY +    + E  W+   LT+L I   +  P  +YCDN GA      P  H R KHI   YH IR  V  G + V  +S+  ++ D  TK L    F+  
Subjt:  EYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQISSEQKIVDPFTKALKAKVFEGH

Query:  LQNLGL
         + +G+
Subjt:  LQNLGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.4e-5530.41Show/hide
Query:  WIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYEIQQMDVKT
        W   MD E+ +M     W +   P ++KPIGCKW+YK K N  G ++ +KARLVAKGYTQ+EG+D  ET S V  L S++++L+I+  Y++ + Q+D+  
Subjt:  WIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYEIQQMDVKT

Query:  TCLNRNLEESIYM-------------------------------AQLE------------GFIENGQEQKVINSIVAFLVL----YVDDILLIGNDVGYL
          LN +L+E IYM                               A  +            GF+++  +      I A L L    YVDDI++  N+   +
Subjt:  TCLNRNLEESIYM-------------------------------AQLE------------GFIENGQEQKVINSIVAFLVL----YVDDILLIGNDVGYL

Query:  TEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMYAM
         E+K  L + F++ DLG  ++FLG++I   R    I + Q  Y   +L    +   K   VP    +  S      +  +  D +  +Y  ++G LMY  
Subjt:  TEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMYAM

Query:  LCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTK-DLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTME
        + TR DI +++  +S++       H  A   IL Y++ T    L Y ++ ++ L  ++D+ FQ+ KD R ST+G    L   ++ W+S KQ  ++ S+ E
Subjt:  LCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTK-DLILTGYTDSDFQTEKDVRGSTSGSVFTLNGGVVVWRSVKQTCIANSTME

Query:  VEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRK
         EY     A  E +WL +F  +L++   +  P  L+CDN+ A+  +     H+R KHIE   H +R+
Subjt:  VEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRK

ATMG00810.1 DNA/RNA polymerases superfamily protein4.6e-1929.49Show/hide
Query:  FLVLYVDDILLIGNDVGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEV
        +L+LYVDDILL G+    L  +   L++ F M DLG   +FLGIQI  +     + +SQ  Y +++L+   M + K    P     L S     K P   
Subjt:  FLVLYVDDILLIGNDVGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKGLVPYKYGILLSKEQCPKTPQEV

Query:  EDMRKVSYASVVGSLMYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDY-MLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNG
        +      + S+VG+L Y  L TRPDI Y++ +V +         +   K +L+Y++ T  + + ++    L +  + DSD+      R ST+G    L  
Subjt:  EDMRKVSYASVVGSLMYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDY-MLVYGTKDLILTGYTDSDFQTEKDVRGSTSGSVFTLNG

Query:  GVVVWRSVKQTCIANSTMEVEYVTTCEAAKEAVW
         ++ W + +Q  ++ S+ E EY      A E  W
Subjt:  GVVVWRSVKQTCIANSTMEVEYVTTCEAAKEAVW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.9e-1340.7Show/hide
Query:  WIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIA
        W + M  E++++  N  W LV  P ++  +GCKW++K KL+  G +   KARLVAKG+ Q EG+   ET S V    +IR +L++A
Subjt:  WIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATGTAGATCGTGACCAATGGATCAAAACCATGGACCTCGAAATGGAGTCTATGTTCTTTAATTCTTTCTGGACTCTAGTGGATCAACCAAATGACAGAAAACC
TATTGGTTGTAAATGGATCTACAAGAGAAAACTGAACCAAGCCGGTAAAGTACAGACTTTTAAGGCTCGACTTGTGGCAAAGGGCTATACCCAAAGAGAAGGAGTGGACC
ATGAAGAAACATCCTCTCTTGTTAGCATGCTTAAGTCGATTAGAATACTCTTATCCATCGCCACTTTTTATGATTATGAAATTCAGCAGATGGATGTCAAGACAACTTGT
TTGAATAGAAATCTTGAGGAGAGTATCTATATGGCTCAACTAGAGGGGTTTATAGAAAATGGTCAAGAACAAAAGGTCATCAATTCCATTGTAGCATTCTTAGTTTTATA
TGTAGATGATATTCTACTTATTGGAAATGACGTAGGTTATCTTACTGAAATCAAGAAATGGCTAGCTACACAATTTCAAATGAATGATTTGGGAGATGCACAATTCTTTC
TTGGAATCCAAATTGTTTGGAACCGTAAAAATAAAACAATAGCCATGTCTCAAGCATCTTATATTGACAAAATGTTGTCTAGATATAAAATGCAGAATTCTAAAAAGGGT
CTGGTACCGTACAAATATGGAATTCTTTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAGGTTGAGGATATGAGGAAAGTTTCCTATGCTTCCGTTGTTGGAAGTTT
GATGTACGCAATGTTATGTACTAGACCTGACATTTGCTACTCAATAGGGATGGTCAGTAAGTATCAGTCTAATCTCGTACGTGATCACTGGATAGCCTTTAAGAATATTT
TAAAATATCTGAGAAGAACAAAAGACTACATGCTCGTGTATGGTACTAAGGATCTGATCCTTACTGGATACACTGATTCTGATTTCCAAACAGAAAAAGATGTTAGAGGG
TCTACATCAGGATCAGTATTCACTCTAAACGGAGGAGTAGTAGTATGGAGAAGCGTAAAACAAACTTGTATAGCCAACTCCACAATGGAAGTTGAATATGTAACAACTTG
TGAAGCAGCAAAGGAAGCAGTATGGCTAAGGAAATTCTTGACAGATCTGGAAATTGTTCCAAATATGCATCTGCCAATCACTTTATATTGTGACAACAGTGGTGCACTTG
CAAATTCACGAGAACCTAGAAGCCATAAACGGGAAAAGCATATCGAACACAAATACCATCTTATCAGGAAAATTGTACATCGTGGTGACGTTGTAGTGACCCAGATTTCT
TCTGAGCAAAAAATTGTTGATCCTTTTACAAAGGCCCTTAAAGCTAAAGTGTTTGAGGGTCACCTACAGAATTTAGGTCTACGATATTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGATGTAGATCGTGACCAATGGATCAAAACCATGGACCTCGAAATGGAGTCTATGTTCTTTAATTCTTTCTGGACTCTAGTGGATCAACCAAATGACAGAAAACC
TATTGGTTGTAAATGGATCTACAAGAGAAAACTGAACCAAGCCGGTAAAGTACAGACTTTTAAGGCTCGACTTGTGGCAAAGGGCTATACCCAAAGAGAAGGAGTGGACC
ATGAAGAAACATCCTCTCTTGTTAGCATGCTTAAGTCGATTAGAATACTCTTATCCATCGCCACTTTTTATGATTATGAAATTCAGCAGATGGATGTCAAGACAACTTGT
TTGAATAGAAATCTTGAGGAGAGTATCTATATGGCTCAACTAGAGGGGTTTATAGAAAATGGTCAAGAACAAAAGGTCATCAATTCCATTGTAGCATTCTTAGTTTTATA
TGTAGATGATATTCTACTTATTGGAAATGACGTAGGTTATCTTACTGAAATCAAGAAATGGCTAGCTACACAATTTCAAATGAATGATTTGGGAGATGCACAATTCTTTC
TTGGAATCCAAATTGTTTGGAACCGTAAAAATAAAACAATAGCCATGTCTCAAGCATCTTATATTGACAAAATGTTGTCTAGATATAAAATGCAGAATTCTAAAAAGGGT
CTGGTACCGTACAAATATGGAATTCTTTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAGGTTGAGGATATGAGGAAAGTTTCCTATGCTTCCGTTGTTGGAAGTTT
GATGTACGCAATGTTATGTACTAGACCTGACATTTGCTACTCAATAGGGATGGTCAGTAAGTATCAGTCTAATCTCGTACGTGATCACTGGATAGCCTTTAAGAATATTT
TAAAATATCTGAGAAGAACAAAAGACTACATGCTCGTGTATGGTACTAAGGATCTGATCCTTACTGGATACACTGATTCTGATTTCCAAACAGAAAAAGATGTTAGAGGG
TCTACATCAGGATCAGTATTCACTCTAAACGGAGGAGTAGTAGTATGGAGAAGCGTAAAACAAACTTGTATAGCCAACTCCACAATGGAAGTTGAATATGTAACAACTTG
TGAAGCAGCAAAGGAAGCAGTATGGCTAAGGAAATTCTTGACAGATCTGGAAATTGTTCCAAATATGCATCTGCCAATCACTTTATATTGTGACAACAGTGGTGCACTTG
CAAATTCACGAGAACCTAGAAGCCATAAACGGGAAAAGCATATCGAACACAAATACCATCTTATCAGGAAAATTGTACATCGTGGTGACGTTGTAGTGACCCAGATTTCT
TCTGAGCAAAAAATTGTTGATCCTTTTACAAAGGCCCTTAAAGCTAAAGTGTTTGAGGGTCACCTACAGAATTTAGGTCTACGATATTTGTAA
Protein sequenceShow/hide protein sequence
MNDVDRDQWIKTMDLEMESMFFNSFWTLVDQPNDRKPIGCKWIYKRKLNQAGKVQTFKARLVAKGYTQREGVDHEETSSLVSMLKSIRILLSIATFYDYEIQQMDVKTTC
LNRNLEESIYMAQLEGFIENGQEQKVINSIVAFLVLYVDDILLIGNDVGYLTEIKKWLATQFQMNDLGDAQFFLGIQIVWNRKNKTIAMSQASYIDKMLSRYKMQNSKKG
LVPYKYGILLSKEQCPKTPQEVEDMRKVSYASVVGSLMYAMLCTRPDICYSIGMVSKYQSNLVRDHWIAFKNILKYLRRTKDYMLVYGTKDLILTGYTDSDFQTEKDVRG
STSGSVFTLNGGVVVWRSVKQTCIANSTMEVEYVTTCEAAKEAVWLRKFLTDLEIVPNMHLPITLYCDNSGALANSREPRSHKREKHIEHKYHLIRKIVHRGDVVVTQIS
SEQKIVDPFTKALKAKVFEGHLQNLGLRYL