| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.6e-181 | 87.64 | Show/hide |
Query: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
PNYSNLKVFGCACFVLL PHEHTKLE RARLC FLGY TEHK F CWDPLS+R RISRHVTFWEHTMFS LSSFH+SFSSPQ FFT+TS+DLFPLSE TP
Subjt: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
Query: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
NELAQSAPTSATSDQSSIS +P P D P RSTRVREPPIHLQDYHCFSTIVSL+EPTSY EASTDPLWQK+MNDELQALEK HTWDYVDLPPGKRP
Subjt: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
Query: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
IG KWIYKIKTHSDGTIERYKARLV KGYSQEYGIDYEETFAP+A MTSVRSLL V AAKQWPLLQMDVKNAFLN TLSEEVYMKPP GTS PHKVCLL
Subjt: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
Query: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
RALYGLKQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTP IV LLLYVDDMIITG+DP A
Subjt: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
|
|
| KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.6e-181 | 87.64 | Show/hide |
Query: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
PNYSNLKVFGCACFVLL PHEHTKLE RARLC FLGY TEHK F CWDPLS+R RISRHVTFWEHTMFS LSSFH+SFSSPQ FFT+TS+DLFPLSE TP
Subjt: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
Query: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
NELAQSAPTSATSDQSSIS +P P D P RSTRVREPPIHLQDYHCFSTIVSL+EPTSY EASTDPLWQK+MNDELQALEK HTWDYVDLPPGKRP
Subjt: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
Query: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
IG KWIYKIKTHSDGTIERYKARLV KGYSQEYGIDYEETFAP+A MTSVRSLL V AAKQWPLLQMDVKNAFLN TLSEEVYMKPP GTS PHKVCLL
Subjt: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
Query: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
RALYGLKQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTP IV LLLYVDDMIITG+DP A
Subjt: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
|
|
| TYK19656.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.6e-181 | 87.64 | Show/hide |
Query: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
PNYSNLKVFGCACFVLL PHEHTKLE RARLC FLGY TEHK F CWDPLS+R RISRHVTFWEHTMFS LSSFH+SFSSPQ FFT+TS+DLFPLSE TP
Subjt: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
Query: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
NELAQSAPTSATSDQSSIS +P P D P RSTRVREPPIHLQDYHCFSTIVSL+EPTSY EASTDPLWQK+MNDELQALEK HTWDYVDLPPGKRP
Subjt: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
Query: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
IG KWIYKIKTHSDGTIERYKARLV KGYSQEYGIDYEETFAP+A MTSVRSLL V AAKQWPLLQMDVKNAFLN TLSEEVYMKPP GTS PHKVCLL
Subjt: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
Query: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
RALYGLKQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTP IV LLLYVDDMIITG+DP A
Subjt: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
|
|
| TYK21532.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.4e-182 | 87.64 | Show/hide |
Query: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
PNYSNLKVFGCACFVLLHPHEHTKLE RARLC FLGY TEHK F CWDPLS+R RISRHVTFWEHTMFS LSSFH+SFSSPQ FFT+TS+DLFPL E TP
Subjt: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
Query: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
DNELAQSAPTSATSDQSSIS +P P+ D P RSTRVR PP HLQDYHCFSTIVSL+EPTSY EASTDPLWQK+MNDELQALEKTHTWDYVDLPPGKRP
Subjt: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
Query: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
IG KWIYKIKTHSDGTIERYKARLV KGYSQE+GIDYEETFAP+A MTSVRSLL V AAKQWPLLQMDVKNAFLN TLSEEVYMKPP GTS PHKVCLL
Subjt: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
Query: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
RALYGLKQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTP IV LLLYVDDMIITG+DPQA
Subjt: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
|
|
| TYK26360.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.6e-181 | 87.64 | Show/hide |
Query: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
PNYSNLKVFGCACFVLL PHEHTKLE RARLC FLGY TEHK F CWDPLS+R RISRHVTFWEHTMFS LSSFH+SFSSPQ FFT+TS+DLFPLSE TP
Subjt: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
Query: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
NELAQSAPTSATSDQSSIS +P P D P RSTRVREPPIHLQDYHCFSTIVSL+EPTSY EASTDPLWQK+MNDELQALEK HTWDYVDLPPGKRP
Subjt: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
Query: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
IG KWIYKIKTHSDGTIERYKARLV KGYSQEYGIDYEETFAP+A MTSVRSLL V AAKQWPLLQMDVKNAFLN TLSEEVYMKPP GTS PHKVCLL
Subjt: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
Query: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
RALYGLKQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTP IV LLLYVDDMIITG+DP A
Subjt: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T8F2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.6e-182 | 87.64 | Show/hide |
Query: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
PNYSNLKVFGCACFVLL PHEHTKLE RARLC FLGY TEHK F CWDPLS+R RISRHVTFWEHTMFS LSSFH+SFSSPQ FFT+TS+DLFPLSE TP
Subjt: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
Query: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
NELAQSAPTSATSDQSSIS +P P D P RSTRVREPPIHLQDYHCFSTIVSL+EPTSY EASTDPLWQK+MNDELQALEK HTWDYVDLPPGKRP
Subjt: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
Query: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
IG KWIYKIKTHSDGTIERYKARLV KGYSQEYGIDYEETFAP+A MTSVRSLL V AAKQWPLLQMDVKNAFLN TLSEEVYMKPP GTS PHKVCLL
Subjt: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
Query: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
RALYGLKQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTP IV LLLYVDDMIITG+DP A
Subjt: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
|
|
| A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.6e-182 | 87.64 | Show/hide |
Query: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
PNYSNLKVFGCACFVLL PHEHTKLE RARLC FLGY TEHK F CWDPLS+R RISRHVTFWEHTMFS LSSFH+SFSSPQ FFT+TS+DLFPLSE TP
Subjt: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
Query: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
NELAQSAPTSATSDQSSIS +P P D P RSTRVREPPIHLQDYHCFSTIVSL+EPTSY EASTDPLWQK+MNDELQALEK HTWDYVDLPPGKRP
Subjt: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
Query: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
IG KWIYKIKTHSDGTIERYKARLV KGYSQEYGIDYEETFAP+A MTSVRSLL V AAKQWPLLQMDVKNAFLN TLSEEVYMKPP GTS PHKVCLL
Subjt: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
Query: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
RALYGLKQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTP IV LLLYVDDMIITG+DP A
Subjt: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
|
|
| A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.6e-182 | 87.64 | Show/hide |
Query: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
PNYSNLKVFGCACFVLL PHEHTKLE RARLC FLGY TEHK F CWDPLS+R RISRHVTFWEHTMFS LSSFH+SFSSPQ FFT+TS+DLFPLSE TP
Subjt: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
Query: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
NELAQSAPTSATSDQSSIS +P P D P RSTRVREPPIHLQDYHCFSTIVSL+EPTSY EASTDPLWQK+MNDELQALEK HTWDYVDLPPGKRP
Subjt: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
Query: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
IG KWIYKIKTHSDGTIERYKARLV KGYSQEYGIDYEETFAP+A MTSVRSLL V AAKQWPLLQMDVKNAFLN TLSEEVYMKPP GTS PHKVCLL
Subjt: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
Query: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
RALYGLKQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTP IV LLLYVDDMIITG+DP A
Subjt: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
|
|
| A0A5D3D7V8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.6e-182 | 87.64 | Show/hide |
Query: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
PNYSNLKVFGCACFVLL PHEHTKLE RARLC FLGY TEHK F CWDPLS+R RISRHVTFWEHTMFS LSSFH+SFSSPQ FFT+TS+DLFPLSE TP
Subjt: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
Query: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
NELAQSAPTSATSDQSSIS +P P D P RSTRVREPPIHLQDYHCFSTIVSL+EPTSY EASTDPLWQK+MNDELQALEK HTWDYVDLPPGKRP
Subjt: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
Query: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
IG KWIYKIKTHSDGTIERYKARLV KGYSQEYGIDYEETFAP+A MTSVRSLL V AAKQWPLLQMDVKNAFLN TLSEEVYMKPP GTS PHKVCLL
Subjt: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
Query: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
RALYGLKQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTP IV LLLYVDDMIITG+DP A
Subjt: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
|
|
| A0A5D3DD70 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-182 | 87.64 | Show/hide |
Query: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
PNYSNLKVFGCACFVLLHPHEHTKLE RARLC FLGY TEHK F CWDPLS+R RISRHVTFWEHTMFS LSSFH+SFSSPQ FFT+TS+DLFPL E TP
Subjt: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQPFFTNTSVDLFPLSEFTP
Query: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
DNELAQSAPTSATSDQSSIS +P P+ D P RSTRVR PP HLQDYHCFSTIVSL+EPTSY EASTDPLWQK+MNDELQALEKTHTWDYVDLPPGKRP
Subjt: DNELAQSAPTSATSDQSSISYDSPKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRP
Query: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
IG KWIYKIKTHSDGTIERYKARLV KGYSQE+GIDYEETFAP+A MTSVRSLL V AAKQWPLLQMDVKNAFLN TLSEEVYMKPP GTS PHKVCLL
Subjt: IGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGTSPSPHKVCLL
Query: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
RALYGLKQ PRAWFATFSSTITQLGFTSSPHDTALFTRHTP IV LLLYVDDMIITG+DPQA
Subjt: HRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDPQA
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 7.2e-36 | 32.97 | Show/hide |
Query: QSAPTSATSDQSSISYDSPKPT--LDTPSHRSTRVREPP-------------IHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWD
+S + I D+P ++ + RS R++ P + L + F+ + + + Y + + W++++N EL A + +TW
Subjt: QSAPTSATSDQSSISYDSPKPT--LDTPSHRSTRVREPP-------------IHLQDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQALEKTHTWD
Query: YVDLPPGKRPIGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGT
P K + +W++ +K + G RYKARLV +G++Q+Y IDYEETFAP+A ++S R +L +V + QMDVK AFLN TL EE+YM+ P G
Subjt: YVDLPPGKRPIGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPYGT
Query: SPSPHKVCLLHRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALF---TRHTPHDIVLLLYVDDMIITGHD
S + VC L++A+YGLKQ R WF F + + F +S D ++ + +I +LLYVDD++I D
Subjt: SPSPHKVCLLHRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALF---TRHTPHDIVLLLYVDDMIITGHD
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.1e-51 | 34.31 | Show/hide |
Query: NYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQP-FFTNTSVDLFPLSEFTP
+YS+LKVFGC F + + TKL+ ++ C F+GY E + WDP+ + SR V F E + + + P F T S P S +
Subjt: NYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTMFSCLSSFHSSFSSPQP-FFTNTSVDLFPLSEFTP
Query: DNELAQSAPTSATSDQSSISYDS-----PKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLV----EPTSYPEASTDP---LWQKSMNDELQALEKTHT
+E+++ + D PT H+ R E P ++ ST L+ EP S E + P K+M +E+++L+K T
Subjt: DNELAQSAPTSATSDQSSISYDS-----PKPTLDTPSHRSTRVREPPIHLQDYHCFSTIVSLV----EPTSYPEASTDP---LWQKSMNDELQALEKTHT
Query: WDYVDLPPGKRPIGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPY
+ V+LP GKRP+ KW++K+K D + RYKARLV KG+ Q+ GID++E F+P+ MTS+R++L + A+ + Q+DVK AFL+ L EE+YM+ P
Subjt: WDYVDLPPGKRPIGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMKPPY
Query: G--TSPSPHKVCLLHRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHD--IVLLLYVDDMIITGHD
G + H VC L+++LYGLKQ PR W+ F S + + + D ++ + + I+LLLYVDDM+I G D
Subjt: G--TSPSPHKVCLLHRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHD--IVLLLYVDDMIITGHD
|
|
| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.2e-17 | 44.9 | Show/hide |
Query: EPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRPIGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVV
EP S A DP W ++M +EL AL + TW V P + +G KW++K K HSDGT++R KARLV KG+ QE GI + ET++P+ ++R++L V
Subjt: EPTSYPEASTDPLWQKSMNDELQALEKTHTWDYVDLPPGKRPIGYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVV
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-54 | 33.82 | Show/hide |
Query: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTM------------------FSCLSSFHSSF----
PNY L+VFGCAC+ L P+ KL+ ++R C FLGY + C + R ISRHV F E+ SC+ S H++
Subjt: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEHTM------------------FSCLSSFHSSF----
Query: ------------------SSPQPFFTNTSV----------DLFP-------------------------------LSEFTPDNE----LAQSAPTSATSD
SSP F N+ V FP S+ P NE LAQS T A S
Subjt: ------------------SSPQPFFTNTSV----------DLFP-------------------------------LSEFTPDNE----LAQSAPTSATSD
Query: QSSIS-YDSPKPTLDTPSHRSTRVREPPIHLQ----------DYHC---------------FSTIVSLV---EPTSYPEASTDPLWQKSMNDELQALEKT
SS S S + +P+ S + PP Q + H +S VSL EP + +A D W+ +M E+ A
Subjt: QSSIS-YDSPKPTLDTPSHRSTRVREPPIHLQ----------DYHC---------------FSTIVSLV---EPTSYPEASTDPLWQKSMNDELQALEKT
Query: HTWDYVDLPPGKRPI-GYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMK
HTWD V PP I G +WI+ K +SDG++ RYKARLV KGY+Q G+DY ETF+P+ TS+R +L V + WP+ Q+DV NAFL TL+++VYM
Subjt: HTWDYVDLPPGKRPI-GYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEEVYMK
Query: PPYG--TSPSPHKVCLLHRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDP
P G P+ VC L +ALYGLKQ PRAW+ + + +GF +S DT+LF IV +L+YVDD++ITG+DP
Subjt: PPYG--TSPSPHKVCLLHRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHDP
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.9e-51 | 30.08 | Show/hide |
Query: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEH------TMFSCLSSFHSSFSSPQPFFTNTSVDLFP
PNY LKVFGCAC+ L P+ KLE +++ C F+GY + C + R SRHV F E T F +S S + ++T++ P
Subjt: PNYSNLKVFGCACFVLLHPHEHTKLELRARLCYFLGYDTEHKDFHCWDPLSDRFRISRHVTFWEH------TMFSCLSSFHSSFSSPQPFFTNTSVDLFP
Query: L---------------------------SEFTPDNELAQSAPTSATSDQSSISYDSPKPT---------------LDTPSHR------------------
L ++ + N + S + ++S+ ++ S++ P+PT L+ P+
Subjt: L---------------------------SEFTPDNELAQSAPTSATSDQSSISYDSPKPT---------------LDTPSHR------------------
Query: --------STRVREP-----------------------------PIHL---------------QDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQA
ST + EP P++ Q Y +++ + EP + +A D W+++M E+ A
Subjt: --------STRVREP-----------------------------PIHL---------------QDYHCFSTIVSLVEPTSYPEASTDPLWQKSMNDELQA
Query: LEKTHTWDYVDLPPGKRPI-GYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEE
HTWD V PP I G +WI+ K +SDG++ RYKARLV KGY+Q G+DY ETF+P+ TS+R +L V + WP+ Q+DV NAFL TL++E
Subjt: LEKTHTWDYVDLPPGKRPI-GYKWIYKIKTHSDGTIERYKARLVPKGYSQEYGIDYEETFAPMAWMTSVRSLLVVVAAKQWPLLQMDVKNAFLNETLSEE
Query: VYMKPPYG--TSPSPHKVCLLHRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHD
VYM P G P VC L +A+YGLKQ PRAW+ + + +GF +S DT+LF I+ +L+YVDD++ITG+D
Subjt: VYMKPPYG--TSPSPHKVCLLHRALYGLKQTPRAWFATFSSTITQLGFTSSPHDTALFTRHTPHDIV-LLLYVDDMIITGHD
|
|
