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Cmc06g0163821 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0163821
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCharged multivesicular body protein 5
Genome locationCMiso1.1chr06:13844387..13844936
RNA-Seq ExpressionCmc06g0163821
SyntenyCmc06g0163821
Gene Ontology termsGO:0006415 - translational termination (biological process)
GO:0006900 - vesicle budding from membrane (biological process)
GO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0005771 - multivesicular body (cellular component)
InterPro domainsIPR005024 - Snf7 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034639.1 charged multivesicular body protein 5 [Cucumis melo var. makuwa]2.7e-6393.57Show/hide
Query:  MSALKSANKELKGMMKT-------VSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
        MSALKSANKELKGMMKT       VS+NQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Subjt:  MSALKSANKELKGMMKT-------VSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE

Query:  ADGVPSYLQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
        ADGVPSYLQPDKESDFEGELNL AAPIGHAAVPAGRNNAQ
Subjt:  ADGVPSYLQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ

KAA0051835.1 charged multivesicular body protein 5-like [Cucumis melo var. makuwa]1.6e-4781.95Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
        MSALKSANKELKGMMKTVS               ++D   + NLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY

Query:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
        LQPDKES+FEGELNL AAPIGHAAVPAGRNNAQ
Subjt:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ

KAA0060755.1 charged multivesicular body protein 5 [Cucumis melo var. makuwa]1.5e-6187.84Show/hide
Query:  MSALKSANKELKGMMKT-------VSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
        MSALKSANKELKGMMKT       VSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Subjt:  MSALKSANKELKGMMKT-------VSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE

Query:  ADGVPSYLQPDKESDFEGELNLSAAPIGHAAVPA-GRNNAQVMIVEKN
        ADGVPSYLQPDKESDFEGELNL AAPIGHAAVPA G ++ +V  ++KN
Subjt:  ADGVPSYLQPDKESDFEGELNLSAAPIGHAAVPA-GRNNAQVMIVEKN

TYK21411.1 charged multivesicular body protein 5-like [Cucumis melo var. makuwa]1.6e-4781.95Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
        MSALKSANKELKGMMKTVS               ++D   + NLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY

Query:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
        LQPDKES+FEGELNL AAPIGHAAVPAGRNNAQ
Subjt:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ

XP_008446740.1 PREDICTED: charged multivesicular body protein 5 [Cucumis melo]1.6e-4781.95Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
        MSALKSANKELKGMMKTV                ++D   + NLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY

Query:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
        LQPDKESDFEGELNL AAPIGHAAVPAGRNNAQ
Subjt:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ

TrEMBL top hitse value%identityAlignment
A0A5A7SZW9 Charged multivesicular body protein 51.3e-6393.57Show/hide
Query:  MSALKSANKELKGMMKT-------VSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
        MSALKSANKELKGMMKT       VS+NQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Subjt:  MSALKSANKELKGMMKT-------VSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE

Query:  ADGVPSYLQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
        ADGVPSYLQPDKESDFEGELNL AAPIGHAAVPAGRNNAQ
Subjt:  ADGVPSYLQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ

A0A5A7UDQ8 Charged multivesicular body protein 5-like7.7e-4881.95Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
        MSALKSANKELKGMMKTVS               ++D   + NLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY

Query:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
        LQPDKES+FEGELNL AAPIGHAAVPAGRNNAQ
Subjt:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ

A0A5A7V4F3 Charged multivesicular body protein 57.2e-6287.84Show/hide
Query:  MSALKSANKELKGMMKT-------VSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
        MSALKSANKELKGMMKT       VSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Subjt:  MSALKSANKELKGMMKT-------VSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE

Query:  ADGVPSYLQPDKESDFEGELNLSAAPIGHAAVPA-GRNNAQVMIVEKN
        ADGVPSYLQPDKESDFEGELNL AAPIGHAAVPA G ++ +V  ++KN
Subjt:  ADGVPSYLQPDKESDFEGELNLSAAPIGHAAVPA-GRNNAQVMIVEKN

A0A5D3CBJ0 Charged multivesicular body protein 57.7e-4881.95Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
        MSALKSANKELKGMMKTV                ++D   + NLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY

Query:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
        LQPDKESDFEGELNL AAPIGHAAVPAGRNNAQ
Subjt:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ

A0A5D3DCL2 Charged multivesicular body protein 5-like7.7e-4881.95Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
        MSALKSANKELKGMMKTVS               ++D   + NLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY

Query:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
        LQPDKES+FEGELNL AAPIGHAAVPAGRNNAQ
Subjt:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ

SwissProt top hitse value%identityAlignment
Q4QQV8 Charged multivesicular body protein 53.7e-0733.09Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
        + A+K   KE+K   K V  +Q                  +++LQD++ D+M+ +NEIQE LGRSY  P ++DED+L  ELDAL    G E  AD   SY
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY

Query:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQVMIVEK
        L              ++AP     VP    N   ++V++
Subjt:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQVMIVEK

Q54JK4 Charged multivesicular body protein 51.3e-0751.61Show/hide
Query:  LQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEAD-GVPSYL
        + ++QDEM DL+D +NEIQE+LGR+Y  PD +DE EL  EL      MG E E +  +PSYL
Subjt:  LQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEAD-GVPSYL

Q9D7S9 Charged multivesicular body protein 53.7e-0733.09Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
        + A+K   KE+K   K V  +Q                  +++LQD++ D+M+ +NEIQE LGRSY  P ++DED+L  ELDAL    G E  AD   SY
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY

Query:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQVMIVEK
        L              ++AP     VP    N   ++V++
Subjt:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQVMIVEK

Q9FMC5 Vacuolar protein sorting-associated protein 60.27.4e-4067.67Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
        M+ALKSANKELKGMMKTV                ++D   + NLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LLGELDALEADMG ETEADGVPSY
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY

Query:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
        LQPDKE D   ELNL +AP+GH   P GR  A+
Subjt:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ

Q9LPN5 Vacuolar protein sorting-associated protein 60.11.1e-3864.66Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
        M+ALKSANKELKGMMKTV                ++D   + NLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+GELDALEADMG ETEADG+PSY
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY

Query:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
        LQPD E+D++ ELNL AAP GH   P GR  A+
Subjt:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ

Arabidopsis top hitse value%identityAlignment
AT3G10640.1 SNF7 family protein7.6e-4064.66Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
        M+ALKSANKELKGMMKTV                ++D   + NLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+GELDALEADMG ETEADG+PSY
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY

Query:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
        LQPD E+D++ ELNL AAP GH   P GR  A+
Subjt:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ

AT3G10640.2 SNF7 family protein7.6e-4064.66Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
        M+ALKSANKELKGMMKTV                ++D   + NLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+GELDALEADMG ETEADG+PSY
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY

Query:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
        LQPD E+D++ ELNL AAP GH   P GR  A+
Subjt:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ

AT5G04850.1 SNF7 family protein5.3e-4167.67Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY
        M+ALKSANKELKGMMKTV                ++D   + NLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LLGELDALEADMG ETEADGVPSY
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY

Query:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
        LQPDKE D   ELNL +AP+GH   P GR  A+
Subjt:  LQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ

AT5G04850.2 SNF7 family protein1.9e-3552.94Show/hide
Query:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLG---------------------
        M+ALKSANKELKGMMKTV                ++D   + NLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LLG                     
Subjt:  MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLG---------------------

Query:  ----------------ELDALEADMGFETEADGVPSYLQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ
                        ELDALEADMG ETEADGVPSYLQPDKE D   ELNL +AP+GH   P GR  A+
Subjt:  ----------------ELDALEADMGFETEADGVPSYLQPDKESDFEGELNLSAAPIGHAAVPAGRNNAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTAACAATCAATTCTTTTTAGCATCCCTAGTTTTATTTTGGCATTTGTTGAGAGA
TTTGTGTTGCCTACAGAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATG
AGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAACCTGATAAGGAATCTGATTTTGAA
GGAGAGCTCAACTTGTCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGGTAGAAACAATGCACAGGTAATGATCGTTGAAAAAAATTGTATGGACTTGTTGGTTGA
AATAGGAAACTTAAGAGATAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTAACAATCAATTCTTTTTAGCATCCCTAGTTTTATTTTGGCATTTGTTGAGAGA
TTTGTGTTGCCTACAGAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATG
AGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAACCTGATAAGGAATCTGATTTTGAA
GGAGAGCTCAACTTGTCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGGTAGAAACAATGCACAGGTAATGATCGTTGAAAAAAATTGTATGGACTTGTTGGTTGA
AATAGGAAACTTAAGAGATAAGTAA
Protein sequenceShow/hide protein sequence
MSALKSANKELKGMMKTVSNNQFFLASLVLFWHLLRDLCCLQNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKESDFE
GELNLSAAPIGHAAVPAGRNNAQVMIVEKNCMDLLVEIGNLRDK