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Cmc06g0163871 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0163871
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCold-regulated protein
Genome locationCMiso1.1chr06:13931425..13932362
RNA-Seq ExpressionCmc06g0163871
SyntenyCmc06g0163871
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457074.1 PREDICTED: uncharacterized protein LOC103496842 [Cucumis melo]2.2e-37100Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
        MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
XP_022143411.1 uncharacterized protein LOC111013291 [Momordica charantia]3.5e-3593.51Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
        MAVG+GVPICIECGTHSNPCRCKVVGPTLGFLAFA AAVVEWPVGALV+CFRH KGRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
XP_022935253.1 uncharacterized protein LOC111442190 [Cucurbita moschata]1.6e-3590.91Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
        MAVG+GVP+C+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHHKGRRIMAHP TVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
XP_023528466.1 uncharacterized protein LOC111791385 [Cucurbita pepo subsp. pepo]1.2e-3592.21Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
        MAVG+GVPIC+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHHKGRRIMAHP TVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
XP_031737948.1 uncharacterized protein LOC116402578 [Cucumis sativus]1.1e-3696.1Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
        M VG+GVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
TrEMBL top hitse value%identityAlignment
A0A0A0LA45 Uncharacterized protein5.2e-3796.1Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
        M VG+GVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
A0A1S3C5C8 uncharacterized protein LOC1034968421.1e-37100Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
        MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
A0A218XJX3 Uncharacterized protein6.0e-3388.31Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
        MA+GVGVPIC+ECGT SNPCRCKVVGPTLGFLAF  AAVVEWP+GALV+CFRH KGRRIMAHPATVVYPSV+NAIPI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
A0A6J1CQ64 uncharacterized protein LOC1110132911.7e-3593.51Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
        MAVG+GVPICIECGTHSNPCRCKVVGPTLGFLAFA AAVVEWPVGALV+CFRH KGRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
A0A6J1FA13 uncharacterized protein LOC1114421907.5e-3690.91Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
        MAVG+GVP+C+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHHKGRRIMAHP TVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03341.1 unknown protein1.7e-2771.83Show/hide
Query:  VPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI
        +PIC++CGT  NPCRCKVVGPTLG +AF  A +VEWPVGALV+ F+H KGRRIM HPAT VYP VS +IPI
Subjt:  VPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCGGAGTCGGCGTTCCGATCTGCATCGAATGTGGGACCCACAGCAATCCGTGCAGATGCAAGGTGGTGGGGCCGACCCTGGGGTTTTTGGCTTTCGCTGTGGC
GGCGGTGGTGGAGTGGCCGGTGGGAGCTCTGGTTTTTTGCTTCCGCCACCACAAGGGCCGCCGTATCATGGCGCATCCGGCTACCGTCGTATACCCGTCGGTGTCTAATG
CGATTCCGATTTGA
mRNA sequenceShow/hide mRNA sequence
GGTAATACCAAGACACCTGTACCACTCAACAGCACGACGACACGTGTCCCGAACACTCTGGCTGAAACCGCCACGTGTCCCTTAAAATCCCAAATTCCCATAAACCTTAC
CTCTCTATAAACTAACCTCTTGAGAACCCTCAGATTCCCATATTCCCAACATTAATTTACTAACTCTCAGCAAATTCGTCCTCCTCCTATTGTCCGTTATACGCTCCGTT
GTGCTCCGGTAACTTAATCCCGGCGAATGGCTGTCGGAGTCGGCGTTCCGATCTGCATCGAATGTGGGACCCACAGCAATCCGTGCAGATGCAAGGTGGTGGGGCCGACC
CTGGGGTTTTTGGCTTTCGCTGTGGCGGCGGTGGTGGAGTGGCCGGTGGGAGCTCTGGTTTTTTGCTTCCGCCACCACAAGGGCCGCCGTATCATGGCGCATCCGGCTAC
CGTCGTATACCCGTCGGTGTCTAATGCGATTCCGATTTGAGAGAATACGCAACTAATGCTGTTCCTTGACATGTTTTTCTTTTCCCAAAGTCCAATGTATATTAATAATG
CATCTGATCAATTTAAGAGTAAAATTAATAGGCTAAATATATACCCTATGTCTCTTCTTATATTATATATATGTGTGTGTACCTATATGTGTGTAGCCAAGTAATAGTGA
CAATTGTAATCTAATAAATAAATCTAGTTGAATTGGGTTATGTATTGCAATTTCTTTTACGCCTAATTAGTTAAAGCGAAGTATCGGTATAATTTGAAGGAGAAAAAATG
TAGGTGTGATCTGCCGGTAGATGCAGAAATTGGTATAAAGAGAGTAAACTTGTGTTTATATGTAGTAGTATAAATTGTAGTTTGATGAGATATCATTTTGATTTGAAGGA
AGTTGGTAGGTGATGACAAACTTAGAGCTTTTAGGTTAATAGGTTATTACTTGAATTG
Protein sequenceShow/hide protein sequence
MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI