; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0163971 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0163971
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRibosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Genome locationCMiso1.1chr06:14125974..14129737
RNA-Seq ExpressionCmc06g0163971
SyntenyCmc06g0163971
Gene Ontology termsNA
InterPro domainsIPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
O49884 60S ribosomal protein L309.1e-0490Show/hide
Query:  NVDLGTACGKYYRVSCLSII
        NVDLGTACGKYYRV CLSI+
Subjt:  NVDLGTACGKYYRVSCLSII
Q8VZ19 60S ribosomal protein L30-27.0e-0490Show/hide
Query:  NVDLGTACGKYYRVSCLSII
        NVDLGTACGKY+RVSCLSI+
Subjt:  NVDLGTACGKYYRVSCLSII
Q9C8F7 Putative 60S ribosomal protein L30-17.0e-0490Show/hide
Query:  NVDLGTACGKYYRVSCLSII
        NVDLGTACGKY+RVSCLSI+
Subjt:  NVDLGTACGKYYRVSCLSII
Q9LSA3 60S ribosomal protein L30-35.3e-0480Show/hide
Query:  KMNG-NVDLGTACGKYYRVSCLSII
        + NG NVDLGTACGKY+RVSCLSI+
Subjt:  KMNG-NVDLGTACGKYYRVSCLSII
Arabidopsis top hitse value%identityAlignment
AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein4.9e-0590Show/hide
Query:  NVDLGTACGKYYRVSCLSII
        NVDLGTACGKY+RVSCLSI+
Subjt:  NVDLGTACGKYYRVSCLSII
AT1G77940.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein4.9e-0590Show/hide
Query:  NVDLGTACGKYYRVSCLSII
        NVDLGTACGKY+RVSCLSI+
Subjt:  NVDLGTACGKYYRVSCLSII
AT3G18740.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein3.8e-0580Show/hide
Query:  KMNG-NVDLGTACGKYYRVSCLSII
        + NG NVDLGTACGKY+RVSCLSI+
Subjt:  KMNG-NVDLGTACGKYYRVSCLSII

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGGGAGGAAGCTTTGAGAAAAAGAGAATGAAAATGAATGGTAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTACCGTGTTTCTTGCCTTAGCATTATCAT
CCAGAAAATACAGTGCTGGAGGAAAATACAGCTGTCATGTTCAATATCAATGAGGCGCTAA
mRNA sequenceShow/hide mRNA sequence
TTTCCTTCTTCACCCACACTCTCTTTTCCTTCTGCAAAATCCCTCCCCTCACGAACGACGAACGACGCATGATGAAAACCCCAACCTTAACCCCATTCTTCTCATCTCCA
CGTCCTTTCTTCTTGACAGAGACCCACGGCGAGGAGACCCATAGCATCGCTTGAAATCAAGGCCAAGGGAGATTTCATGGCTATGGGAGGAAGCTTTGAGAAAAAGAGAA
TGAAAATGAATGGTAATGTTGATCTTGGAACTGCTTGTGGCAAGTATTACCGTGTTTCTTGCCTTAGCATTATCATCCAGAAAATACAGTGCTGGAGGAAAATACAGCTG
TCATGTTCAATATCAATGAGGCGCTAAAAGTTGTTCTCAGCCTTCTACTTCAAATCCCAGCACTTCAGAATCCATTTTCATTCAAAGGGTTGCTTTTCTCTCCTTTCATT
CAAATCGTACAGACCTTTACGATTACAATATTTGTGTATTAACTTACTCATACAATAATTTGAGTTTATATCTTTTTGTTTTTTAAGTTTTGAATATTGTTGACATCGTG
TGTTTTGTCATTTGAAAAAAAAAAAAATCAGTTTCCTAACATGTTGAGTGAGAGAAATTTGAACTACTTTTCTTTTGGATTGAGTTTGGATATATTATAT
Protein sequenceShow/hide protein sequence
MAMGGSFEKKRMKMNGNVDLGTACGKYYRVSCLSIIIQKIQCWRKIQLSCSISMRR