CuGenDBv2

Gene ID	Cmc06g0164171
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Genome location	CMiso1.1chr06:14430387..14431184
RNA-Seq Expression	Cmc06g0164171
Synteny	Cmc06g0164171
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR012337 - Ribonuclease H-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0045110.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]

1.5e-74

57.14

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Query:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD
        M+MGLTLLSQATLPLSFW E FSTSV+LINRL T VLN +SPL+KLF ++P++  LR+FGC+CYP +RPYQS+KLS +S PCTFL YS+SHK YKCL+ D
Subjt:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD

Query:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP
        GRL+I RHV+  ENSFPYASF SHS       V +PP  SI+ +  +NHN  +   +  +DN D  N  I+YPLETG    +R++S S G    + P++ 
Subjt:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP

Query:  QHQTDYGMNTQLQST-SIHPMITRSKHGIFKPKAFLIDYTQTEPCNVKEAFKRSHWEKAMKEEFEA
        +   +   N    ST + HPM+TRSK+GIFKPKA LIDYT+ EP N KEA K  HW KAM+EEF A
Subjt:  QHQTDYGMNTQLQST-SIHPMITRSKHGIFKPKAFLIDYTQTEPCNVKEAFKRSHWEKAMKEEFEA

KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]

4.3e-109

89.78

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Query:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD
        MEMGLTLLSQATLPLSFW E FSTSV+LINRLPT VL+NISPL+KLF +KPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHK YKCLA D
Subjt:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD

Query:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP
        GRLFI RHVLFDENSFPYASF+SHS  PKSK+VLSPPLHSII SSLMNHNED+RHTDTVSDNTDHLNPTIVYPLETGTQESSRDD NSGGITQS S MEP
Subjt:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP

Query:  QHQTDYGMNTQLQSTSIHPMITRSK
         HQTD GMNTQLQSTSIHPMIT+SK
Subjt:  QHQTDYGMNTQLQSTSIHPMITRSK

KAA0067212.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]

4.6e-127

87.17

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Query:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD
        MEMGLTLLSQATLPLSFW E F TSV+LIN LPT VL+NISPL+KLF +KPNFP LRVFGCKCYPY RPYQSHKLSLRSTPCTFLGYSTSHK YKCLA D
Subjt:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD

Query:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP
        GRLFI RHVLFDENSFPYASF+SHS IPKSKNVLSPPLHSII SSLMNHNED+RHTDTVSDNTD+LN TIVYPLETGTQESSRDD NSGGITQS SPMEP
Subjt:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP

Query:  QHQTDYGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPCNVKEAFKRSHWEKAMKEEFEA
         HQTD GMNTQLQSTSIHPMIT+SKH IFKPKAFLIDYTQTE CN KEAF   HW+KAM+EEFEA
Subjt:  QHQTDYGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPCNVKEAFKRSHWEKAMKEEFEA

TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]

1.1e-109

90.22

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Query:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD
        MEMGLTLLSQATLPLSFW E FSTSV+LINRLPT VL+NISPL+KLF +KPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHK YKCLA D
Subjt:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD

Query:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP
        GRLFI RHVLFDENSFPYASF+SHS IPKSK+VLSPPLHSII SSLMNHNED+RHTDTVSDNTDHLNPTIVYPLETGTQESSRDD NSGGITQS S MEP
Subjt:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP

Query:  QHQTDYGMNTQLQSTSIHPMITRSK
         HQTD GMNTQLQSTSIHPMIT+SK
Subjt:  QHQTDYGMNTQLQSTSIHPMITRSK

TYK18915.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]

2.4e-128

87.55

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Query:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD
        MEMGLTLLSQATLPLSFW E FSTSV+LIN LPT VL+NISPL+K+F +KPNFP LRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHK YKCLA D
Subjt:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD

Query:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP
        GRLFI RHVLFDENSFPYASF+SHS IPKSKNVLSPPLHSII SSLMNHNED+RHTDTVSDNTD+LNPTIVYPLETGTQESSRDD NSGGITQS SPMEP
Subjt:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP

Query:  QHQTDYGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPCNVKEAFKRSHWEKAMKEEFEA
         HQTD GMNTQLQSTSIHPMIT+SKH IFKPKAFLIDYTQTE CN KEAF   HW+KAM+EEF+A
Subjt:  QHQTDYGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPCNVKEAFKRSHWEKAMKEEFEA

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-94

2.1e-109

89.78

Show/hide

Query:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD
        MEMGLTLLSQATLPLSFW E FSTSV+LINRLPT VL+NISPL+KLF +KPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHK YKCLA D
Subjt:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD

Query:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP
        GRLFI RHVLFDENSFPYASF+SHS  PKSK+VLSPPLHSII SSLMNHNED+RHTDTVSDNTDHLNPTIVYPLETGTQESSRDD NSGGITQS S MEP
Subjt:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP

Query:  QHQTDYGMNTQLQSTSIHPMITRSK
         HQTD GMNTQLQSTSIHPMIT+SK
Subjt:  QHQTDYGMNTQLQSTSIHPMITRSK

A0A5A7VFQ6 Retrotransposon protein, putative, Ty1-copia subclass

2.2e-127

87.17

Show/hide

Query:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD
        MEMGLTLLSQATLPLSFW E F TSV+LIN LPT VL+NISPL+KLF +KPNFP LRVFGCKCYPY RPYQSHKLSLRSTPCTFLGYSTSHK YKCLA D
Subjt:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD

Query:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP
        GRLFI RHVLFDENSFPYASF+SHS IPKSKNVLSPPLHSII SSLMNHNED+RHTDTVSDNTD+LN TIVYPLETGTQESSRDD NSGGITQS SPMEP
Subjt:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP

Query:  QHQTDYGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPCNVKEAFKRSHWEKAMKEEFEA
         HQTD GMNTQLQSTSIHPMIT+SKH IFKPKAFLIDYTQTE CN KEAF   HW+KAM+EEFEA
Subjt:  QHQTDYGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPCNVKEAFKRSHWEKAMKEEFEA

A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-94

5.5e-110

90.22

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Query:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD
        MEMGLTLLSQATLPLSFW E FSTSV+LINRLPT VL+NISPL+KLF +KPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHK YKCLA D
Subjt:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD

Query:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP
        GRLFI RHVLFDENSFPYASF+SHS IPKSK+VLSPPLHSII SSLMNHNED+RHTDTVSDNTDHLNPTIVYPLETGTQESSRDD NSGGITQS S MEP
Subjt:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP

Query:  QHQTDYGMNTQLQSTSIHPMITRSK
         HQTD GMNTQLQSTSIHPMIT+SK
Subjt:  QHQTDYGMNTQLQSTSIHPMITRSK

A0A5D3D5W0 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.2e-128

87.55

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Query:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD
        MEMGLTLLSQATLPLSFW E FSTSV+LIN LPT VL+NISPL+K+F +KPNFP LRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHK YKCLA D
Subjt:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD

Query:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP
        GRLFI RHVLFDENSFPYASF+SHS IPKSKNVLSPPLHSII SSLMNHNED+RHTDTVSDNTD+LNPTIVYPLETGTQESSRDD NSGGITQS SPMEP
Subjt:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP

Query:  QHQTDYGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPCNVKEAFKRSHWEKAMKEEFEA
         HQTD GMNTQLQSTSIHPMIT+SKH IFKPKAFLIDYTQTE CN KEAF   HW+KAM+EEF+A
Subjt:  QHQTDYGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPCNVKEAFKRSHWEKAMKEEFEA

A0A5D3DJG8 Retrovirus-related Pol polyprotein from transposon TNT 1-94

7.5e-75

57.14

Show/hide

Query:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD
        M+MGLTLLSQATLPLSFW E FSTSV+LINRL T VLN +SPL+KLF ++P++  LR+FGC+CYP +RPYQS+KLS +S PCTFL YS+SHK YKCL+ D
Subjt:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD

Query:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP
        GRL+I RHV+  ENSFPYASF SHS       V +PP  SI+ +  +NHN  +   +  +DN D  N  I+YPLETG    +R++S S G    + P++ 
Subjt:  GRLFIYRHVLFDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEP

Query:  QHQTDYGMNTQLQST-SIHPMITRSKHGIFKPKAFLIDYTQTEPCNVKEAFKRSHWEKAMKEEFEA
        +   +   N    ST + HPM+TRSK+GIFKPKA LIDYT+ EP N KEA K  HW KAM+EEF A
Subjt:  QHQTDYGMNTQLQST-SIHPMITRSKHGIFKPKAFLIDYTQTEPCNVKEAFKRSHWEKAMKEEFEA

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

1.0e-04

26.7

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Query:  EMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVL--NNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCL-A
        E   T++S A L  SFW E   T+ +LINR+P+  L  ++ +P +    +KP    LRVFG   Y +++  Q  K   +S    F+GY  +   +K   A
Subjt:  EMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVL--NNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCL-A

Query:  LDGRLFIYRHVLFDENSFPYAS-------FSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLN
        ++ +  + R V+ DE +   +        F   S   ++KN  +     IIQ+   N +++  +   + D+ +  N
Subjt:  LDGRLFIYRHVLFDENSFPYAS-------FSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLN

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

4.4e-32

35.91

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Query:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD
        +E GLTLLS A++P ++W   F+ +V+LINRLPT +L   SP +KLFG  PN+  LRVFGC CYP+LRPY  HKL  +S  C FLGYS +   Y CL L 
Subjt:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALD

Query:  -GRLFIYRHVLFDENSFPYASF------------------SSHSHIPKSKNVL-----SPPLHSIIQSS-----LMNHNEDKRHTDTVSDNTDHLNPTIV
          RL+I RHV FDEN FP++++                  S H+ +P    VL     S P H+    S       N      + D+   ++   +P   
Subjt:  -GRLFIYRHVLFDENSFPYASF------------------SSHSHIPKSKNVL-----SPPLHSIIQSS-----LMNHNEDKRHTDTVSDNTDHLNPTIV

Query:  YPLETGTQ------ESSRDDSNSGGITQSSSPMEPQHQTDYGMNTQLQSTSIHPMITRS
         P + G Q      ++     +S   +Q++   E   Q    ++T  QS+S  P  T S
Subjt:  YPLETGTQ------ESSRDDSNSGGITQSSSPMEPQHQTDYGMNTQLQSTSIHPMITRS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

5.8e-32

41.63

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Query:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLAL-
        +EMGLTLLS A++P ++W   FS +V+LINRLPT +L   SP +KLFGQ PN+  L+VFGC CYP+LRPY  HKL  +S  C F+GYS +   Y CL + 
Subjt:  MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLAL-

Query:  DGRLFIYRHVLFDENSFPYASFS---SHSHIPKSKNVLSPPLHSIIQSSLMNHNEDK---RHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQ
         GRL+  RHV FDE  FP+++ +   S S   +S +  + P H+ + ++ +          H D     T    P+   PL T    SS   S+S     
Subjt:  DGRLFIYRHVLFDENSFPYASFS---SHSHIPKSKNVLSPPLHSIIQSSLMNHNEDK---RHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQ

Query:  SSSPMEPQH
        SS P  P H
Subjt:  SSSPMEPQH

Arabidopsis top hits

e value

%identity

Alignment

ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein

4.0e-04

33.9

Show/hide

Query:  TLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCY
        ++L +  LP +F  +  +T+VH+IN+ P++ +N   P +  F   P +  LR FGC  Y
Subjt:  TLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAATGGGTCTTACATTGCTATCTCAAGCCACTTTACCTCTATCATTCTGGGTCGAACCCTTTTCCACTAGTGTCCATCTCATAAATCGTTTGCCTACCTCAGTCCT
TAATAATATAAGCCCGTTGAAGAAGCTATTTGGCCAGAAACCTAACTTTCCTTCTCTTAGAGTCTTTGGTTGCAAGTGTTATCCCTACCTTCGACCCTACCAATCACATA
AACTATCTCTCCGATCCACACCATGTACTTTCCTAGGATACAGTACCTCACATAAGTGGTACAAATGTCTAGCTTTAGATGGTCGCCTTTTCATTTATAGACATGTATTA
TTTGATGAAAATTCATTTCCATATGCATCATTTTCATCTCATTCTCACATACCCAAATCCAAAAATGTCCTATCTCCACCACTTCACTCAATAATCCAATCATCCCTTAT
GAACCATAATGAGGATAAGCGACACACTGACACAGTTTCTGATAACACTGATCATCTAAACCCTACTATTGTGTATCCTTTAGAGACAGGTACTCAAGAGAGCTCTCGGG
ATGATAGTAACAGTGGAGGTATTACTCAATCTTCAAGTCCTATGGAACCACAACATCAAACTGATTATGGTATGAACACTCAACTTCAATCTACATCCATTCATCCCATG
ATAACACGGAGTAAGCATGGTATTTTCAAACCAAAAGCATTCTTGATTGATTATACTCAAACTGAACCTTGTAATGTCAAGGAAGCTTTTAAACGTTCCCATTGGGAAAA
GGCCATGAAAGAAGAGTTTGAAGCCTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MEMGLTLLSQATLPLSFWVEPFSTSVHLINRLPTSVLNNISPLKKLFGQKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTPCTFLGYSTSHKWYKCLALDGRLFIYRHVL
FDENSFPYASFSSHSHIPKSKNVLSPPLHSIIQSSLMNHNEDKRHTDTVSDNTDHLNPTIVYPLETGTQESSRDDSNSGGITQSSSPMEPQHQTDYGMNTQLQSTSIHPM
ITRSKHGIFKPKAFLIDYTQTEPCNVKEAFKRSHWEKAMKEEFEA

Cmc06g0164171 (gene) of Melon (Charmono) v1.1 genome